RNA–Protein interactions for RNA: YLL049W

LDB18, Transcript of Component of the dynactin complex, yeastyeast

Gene LDB18, Length 540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB18YLL049W LYS1P38998 373 aaRIP-Chip data5.24□□□□□ -1.57not detected
LDB18YLL049W YFR018CP43599 363 aa5.24□□□□□ -1.57
LDB18YLL049W YJL132WP47014 750 aa5.24□□□□□ -1.57
LDB18YLL049W YPT11P48559 417 aa5.24□□□□□ -1.57
LDB18YLL049W COG1P53079 417 aa5.24□□□□□ -1.57
LDB18YLL049W STR3P53101 465 aaKnown RBP5.24□□□□□ -1.57
LDB18YLL049W NNF2P53253 936 aa5.24□□□□□ -1.57
LDB18YLL049W REG1Q00816 1014 aa5.24□□□□□ -1.57
LDB18YLL049W YPL109CQ02981 657 aa5.24□□□□□ -1.57
LDB18YLL049W YDR222WQ04925 415 aa5.24□□□□□ -1.57
LDB18YLL049W PGC1Q08959 321 aa5.24□□□□□ -1.57
LDB18YLL049W SMF3Q12078 473 aaPredicted RBP5.24□□□□□ -1.57
LDB18YLL049W RPL7BQ12213 244 aaKnown RBP5.24□□□□□ -1.57
LDB18YLL049W COX5AP00424 153 aa5.23□□□□□ -1.57
LDB18YLL049W BCY1P07278 416 aaKnown RBP5.23□□□□□ -1.57
LDB18YLL049W HOP1P20050 605 aa5.23□□□□□ -1.57
LDB18YLL049W SPC110P32380 944 aa5.23□□□□□ -1.57
LDB18YLL049W EMC3P36039 253 aa5.23□□□□□ -1.57
LDB18YLL049W GMH1P36125 273 aa5.23□□□□□ -1.57
LDB18YLL049W PBP2P38151 413 aaKnown RBP RIP-Chip data5.23□□□□□ -1.57not detected
LDB18YLL049W TAT2P38967 592 aa5.23□□□□□ -1.57
LDB18YLL049W SSN3P39073 555 aa5.23□□□□□ -1.57
LDB18YLL049W ELO3P40319 345 aa5.23□□□□□ -1.57
LDB18YLL049W YTA6P40328 754 aa5.23□□□□□ -1.57
LDB18YLL049W TY4A-JP47023 414 aa5.23□□□□□ -1.57
LDB18YLL049W YJR030CP47101 745 aa5.23□□□□□ -1.57
LDB18YLL049W YJR115WP47152 169 aa5.23□□□□□ -1.57
LDB18YLL049W SRP1Q02821 542 aaKnown RBP5.23□□□□□ -1.57
LDB18YLL049W MSH6Q03834 1242 aa5.23□□□□□ -1.57
LDB18YLL049W RSF1Q05043 376 aa5.23□□□□□ -1.57
LDB18YLL049W DDP1Q99321 188 aaKnown RBP5.23□□□□□ -1.57
LDB18YLL049W IZH4Q99393 312 aa5.23□□□□□ -1.57
LDB18YLL049W RPS31P05759 152 aaKnown RBP5.22□□□□□ -1.57
LDB18YLL049W TRX1P22217 103 aaKnown RBP5.22□□□□□ -1.57
LDB18YLL049W MCM5P29496 775 aaKnown RBP5.22□□□□□ -1.57
LDB18YLL049W PET309P32522 965 aaPredicted RBP5.22□□□□□ -1.57
LDB18YLL049W DOM34P33309 386 aa5.22□□□□□ -1.57
LDB18YLL049W YBR259WP38338 688 aa5.22□□□□□ -1.57
LDB18YLL049W BIT2P38346 545 aa5.22□□□□□ -1.57
LDB18YLL049W YHR033WP38690 423 aa5.22□□□□□ -1.57
LDB18YLL049W YHR210CP38893 341 aa5.22□□□□□ -1.57
LDB18YLL049W ATM1P40416 690 aa5.22□□□□□ -1.57
LDB18YLL049W MNN11P46985 422 aaKnown RBP5.22□□□□□ -1.57
LDB18YLL049W YGR053CP53234 283 aa5.22□□□□□ -1.57
LDB18YLL049W ARE2P53629 642 aaKnown RBP5.22□□□□□ -1.57
LDB18YLL049W FRE4P53746 719 aa5.22□□□□□ -1.57
LDB18YLL049W RRN11Q04712 507 aa5.22□□□□□ -1.57
LDB18YLL049W CIA1Q05583 330 aa5.22□□□□□ -1.57
LDB18YLL049W RRP45Q05636 305 aaKnown RBP5.22□□□□□ -1.57
LDB18YLL049W REH1Q06709 432 aa5.22□□□□□ -1.57
LDB18YLL049W MCA1Q08601 432 aa5.22□□□□□ -1.57
LDB18YLL049W HUA2Q12134 243 aa5.22□□□□□ -1.57
LDB18YLL049W YOR097CQ12274 175 aaPredicted RBP5.22□□□□□ -1.57
LDB18YLL049W CMR1Q12510 522 aaKnown RBP5.22□□□□□ -1.57
LDB18YLL049W FAS1P07149 2051 aaKnown RBP5.22□□□□□ -1.57
LDB18YLL049W RPC31P17890 251 aa5.21□□□□□ -1.58
LDB18YLL049W ATG15P25641 520 aa5.21□□□□□ -1.58
LDB18YLL049W AEP1P32493 518 aa5.21□□□□□ -1.58
LDB18YLL049W GDA1P32621 518 aa5.21□□□□□ -1.58
LDB18YLL049W SHM1P37292 490 aaPredicted RBP5.21□□□□□ -1.58
LDB18YLL049W FTH1P38310 465 aa5.21□□□□□ -1.58
LDB18YLL049W DBP8P38719 431 aa5.21□□□□□ -1.58
LDB18YLL049W AIM46P38885 310 aa5.21□□□□□ -1.58
LDB18YLL049W TMN3P40071 706 aa5.21□□□□□ -1.58
LDB18YLL049W ELP2P42935 788 aa5.21□□□□□ -1.58
LDB18YLL049W YFR020WP43600 232 aa5.21□□□□□ -1.58
LDB18YLL049W ENT5Q03769 411 aaKnown RBP5.21□□□□□ -1.58
LDB18YLL049W YDR132CQ03900 495 aa5.21□□□□□ -1.58
LDB18YLL049W YDR338CQ05497 695 aa5.21□□□□□ -1.58
LDB18YLL049W ESC2Q06340 456 aa5.21□□□□□ -1.58
LDB18YLL049W DIN7Q12086 430 aa5.21□□□□□ -1.58
LDB18YLL049W EFG1Q3E705 233 aaKnown RBP5.21□□□□□ -1.58
LDB18YLL049W GPA1P08539 472 aa5.2□□□□□ -1.58
LDB18YLL049W VPS34P22543 875 aa5.2□□□□□ -1.58
LDB18YLL049W EMC1P25574 760 aa5.2□□□□□ -1.58
LDB18YLL049W CPR3P25719 182 aa5.2□□□□□ -1.58
LDB18YLL049W HXT3P32466 567 aaKnown RBP5.2□□□□□ -1.58
LDB18YLL049W ELM1P32801 640 aa5.2□□□□□ -1.58
LDB18YLL049W MRS6P32864 603 aaKnown RBP5.2□□□□□ -1.58
LDB18YLL049W DUT1P33317 147 aa5.2□□□□□ -1.58
LDB18YLL049W KAE1P36132 386 aa5.2□□□□□ -1.58
LDB18YLL049W TFA2P36145 328 aa5.2□□□□□ -1.58
LDB18YLL049W AIM18P38884 321 aa5.2□□□□□ -1.58
LDB18YLL049W YEL073CP39974 107 aa5.2□□□□□ -1.58
LDB18YLL049W SER3P40054 469 aa5.2□□□□□ -1.58
LDB18YLL049W SEC24P40482 926 aaKnown RBP5.2□□□□□ -1.58
LDB18YLL049W YIL086CP40503 102 aa5.2□□□□□ -1.58
LDB18YLL049W TAD1P53065 400 aa5.2□□□□□ -1.58
LDB18YLL049W TIM13P53299 105 aa5.2□□□□□ -1.58
LDB18YLL049W GND2P53319 492 aa5.2□□□□□ -1.58
LDB18YLL049W CTR9P89105 1077 aa5.2□□□□□ -1.58
LDB18YLL049W NAN1Q02931 896 aaKnown RBP5.2□□□□□ -1.58
LDB18YLL049W TDA5Q06417 326 aaKnown RBP5.2□□□□□ -1.58
LDB18YLL049W LDB18Q07887 179 aa5.2□□□□□ -1.58
LDB18YLL049W TGL5Q12043 749 aa5.2□□□□□ -1.58
LDB18YLL049W CWC2Q12046 339 aaPredicted RBP5.2□□□□□ -1.58
LDB18YLL049W CDC37P06101 506 aaKnown RBP5.19□□□□□ -1.58
LDB18YLL049W CPA1P07258 411 aaKnown RBP5.19□□□□□ -1.58
LDB18YLL049W SSA3P09435 649 aaKnown RBP5.19□□□□□ -1.58
LDB18YLL049W TUP1P16649 713 aa5.19□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms