RNA–Protein interactions for RNA: YLL011W

SOF1, Transcript of Protein required for biogenesis of 40S (small) ribosomal subunit, yeastyeast

Gene SOF1, Length 1,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOF1YLL011W VPS34P22543 875 aa4.52□□□□□ -1.69
SOF1YLL011W YIH1P25637 258 aa4.52□□□□□ -1.69
SOF1YLL011W SRB5P32585 307 aa4.52□□□□□ -1.69
SOF1YLL011W BCS1P32839 456 aa4.52□□□□□ -1.69
SOF1YLL011W PMT1P33775 817 aa4.52□□□□□ -1.69
SOF1YLL011W ERC1P38767 581 aa4.52□□□□□ -1.69
SOF1YLL011W NAS2P40555 220 aa4.52□□□□□ -1.69
SOF1YLL011W CTK2P46962 323 aa4.52□□□□□ -1.69
SOF1YLL011W PET130P47065 347 aa4.52□□□□□ -1.69
SOF1YLL011W CTR1P49573 406 aa4.52□□□□□ -1.69
SOF1YLL011W SNF12P53628 566 aa4.52□□□□□ -1.69
SOF1YLL011W PLB2Q03674 706 aa4.52□□□□□ -1.69
SOF1YLL011W SPH1Q06160 661 aa4.52□□□□□ -1.69
SOF1YLL011W CDC45Q08032 650 aa4.52□□□□□ -1.69
SOF1YLL011W PSY3Q12318 242 aa4.52□□□□□ -1.69
SOF1YLL011W NPC2Q12408 173 aa4.52□□□□□ -1.69
SOF1YLL011W RPP2AP05319 106 aaKnown RBP4.51□□□□□ -1.69
SOF1YLL011W TPK2P06245 380 aa4.51□□□□□ -1.69
SOF1YLL011W ARD1P07347 238 aaPredicted RBP4.51□□□□□ -1.69
SOF1YLL011W GCD1P09032 578 aaPredicted RBP4.51□□□□□ -1.69
SOF1YLL011W RPL3P14126 387 aaKnown RBP4.51□□□□□ -1.69
SOF1YLL011W LRE1P25579 583 aaKnown RBP4.51□□□□□ -1.69
SOF1YLL011W SPB1P25582 841 aaPredicted RBP4.51□□□□□ -1.69
SOF1YLL011W SYN8P31377 255 aa4.51□□□□□ -1.69
SOF1YLL011W ADH5P38113 351 aaKnown RBP4.51□□□□□ -1.69
SOF1YLL011W SAF1P38352 637 aa4.51□□□□□ -1.69
SOF1YLL011W FMO1P38866 432 aa4.51□□□□□ -1.69
SOF1YLL011W REV7P38927 245 aa4.51□□□□□ -1.69
SOF1YLL011W VMA13P41807 478 aaKnown RBP4.51□□□□□ -1.69
SOF1YLL011W CCT7P42943 550 aaKnown RBP4.51□□□□□ -1.69
SOF1YLL011W CAK1P43568 368 aaPredicted RBP4.51□□□□□ -1.69
SOF1YLL011W LSB3P43603 459 aaKnown RBP4.51□□□□□ -1.69
SOF1YLL011W TLG1Q03322 224 aa4.51□□□□□ -1.69
SOF1YLL011W YAP6Q03935 383 aa4.51□□□□□ -1.69
SOF1YLL011W BUD22Q04347 519 aaKnown RBP4.51□□□□□ -1.69
SOF1YLL011W RQC1Q05468 723 aaKnown RBP4.51□□□□□ -1.69
SOF1YLL011W PML1Q07930 204 aaPredicted RBP4.51□□□□□ -1.69
SOF1YLL011W GPN2Q08726 347 aaPredicted RBP4.51□□□□□ -1.69
SOF1YLL011W YPL272CQ08984 517 aa4.51□□□□□ -1.69
SOF1YLL011W LPX1Q12405 387 aaKnown RBP4.51□□□□□ -1.69
SOF1YLL011W CEX1Q12453 761 aa4.51□□□□□ -1.69
SOF1YLL011W RRP36Q12481 300 aaPredicted RBP4.51□□□□□ -1.69
SOF1YLL011W PRE10P21242 288 aaKnown RBP RIP-Chip data4.5□□□□□ -1.69not detected
SOF1YLL011W PHO84P25297 587 aaKnown RBP4.5□□□□□ -1.69
SOF1YLL011W YJL206CP39529 758 aa4.5□□□□□ -1.69
SOF1YLL011W OSW5P40219 148 aa4.5□□□□□ -1.69
SOF1YLL011W CHA4P43634 648 aa4.5□□□□□ -1.69
SOF1YLL011W IMO32P53219 342 aa4.5□□□□□ -1.69
SOF1YLL011W YGR111WP53265 400 aa4.5□□□□□ -1.69
SOF1YLL011W TIM11P81449 96 aaPredicted RBP4.5□□□□□ -1.69
SOF1YLL011W USA1Q03714 838 aa4.5□□□□□ -1.69
SOF1YLL011W RPC11Q04307 110 aaPredicted RBP4.5□□□□□ -1.69
SOF1YLL011W YMR111CQ04461 462 aaPredicted RBP4.5□□□□□ -1.69
SOF1YLL011W MLH2Q07980 695 aa4.5□□□□□ -1.69
SOF1YLL011W MRN1Q08925 612 aaKnown RBP RIP-Chip data4.5□□□□□ -1.69not detected
SOF1YLL011W BMS1Q08965 1183 aaKnown RBP4.5□□□□□ -1.69
SOF1YLL011W PRS5Q12265 496 aaKnown RBP4.5□□□□□ -1.69
SOF1YLL011W TRM11Q12463 433 aa4.5□□□□□ -1.69
SOF1YLL011W HAP1P0CE41 1502 aa4.5□□□□□ -1.69
SOF1YLL011W GEA1P47102 1408 aaPredicted RBP4.5□□□□□ -1.69
SOF1YLL011W YML133CQ03099 1374 aa4.5□□□□□ -1.69
SOF1YLL011W YLL067CQ07888 1374 aa4.5□□□□□ -1.69
SOF1YLL011W YLL066CQ99208 1374 aa4.5□□□□□ -1.69
SOF1YLL011W USO1P25386 1790 aa4.5□□□□□ -1.69
SOF1YLL011W MSB1P21339 1137 aaKnown RBP4.49□□□□□ -1.69
SOF1YLL011W EMC1P25574 760 aa4.49□□□□□ -1.69
SOF1YLL011W RFA2P26754 273 aaKnown RBP4.49□□□□□ -1.69
SOF1YLL011W PPQ1P32945 549 aa4.49□□□□□ -1.69
SOF1YLL011W SEF1P34228 1148 aa4.49□□□□□ -1.69
SOF1YLL011W LOT5P34234 306 aa4.49□□□□□ -1.69
SOF1YLL011W CMC1P36064 111 aa4.49□□□□□ -1.69
SOF1YLL011W DAD2P36162 133 aa4.49□□□□□ -1.69
SOF1YLL011W AGP2P38090 596 aa4.49□□□□□ -1.69
SOF1YLL011W RRT2P38332 387 aa4.49□□□□□ -1.69
SOF1YLL011W ARO9P38840 513 aaPredicted RBP4.49□□□□□ -1.69
SOF1YLL011W NUP60P39705 539 aa4.49□□□□□ -1.69
SOF1YLL011W PIG2P40187 538 aa4.49□□□□□ -1.69
SOF1YLL011W FKH2P41813 862 aa4.49□□□□□ -1.69
SOF1YLL011W DLD2P46681 530 aaKnown RBP4.49□□□□□ -1.69
SOF1YLL011W VID30P53076 958 aa4.49□□□□□ -1.69
SOF1YLL011W YGR079WP53249 370 aa4.49□□□□□ -1.69
SOF1YLL011W KAP120Q02932 1032 aa4.49□□□□□ -1.69
SOF1YLL011W SOV1Q04748 898 aa4.49□□□□□ -1.69
SOF1YLL011W HEL2Q05580 639 aaKnown RBP4.49□□□□□ -1.69
SOF1YLL011W HMI1Q12039 706 aa4.49□□□□□ -1.69
SOF1YLL011W CHS5Q12114 671 aaKnown RBP4.49□□□□□ -1.69
SOF1YLL011W MDY2Q12285 212 aa4.49□□□□□ -1.69
SOF1YLL011W AVL9Q12500 764 aa4.49□□□□□ -1.69
SOF1YLL011W CDC15P27636 974 aa4.49□□□□□ -1.69
SOF1YLL011W MVD1P32377 396 aaKnown RBP4.49□□□□□ -1.69
SOF1YLL011W MSS1P32559 526 aaPredicted RBP4.49□□□□□ -1.69
SOF1YLL011W YEL043WP32618 956 aa4.49□□□□□ -1.69
SOF1YLL011W TCD2P36101 447 aaKnown RBP4.49□□□□□ -1.69
SOF1YLL011W MNN2P38069 597 aa4.49□□□□□ -1.69
SOF1YLL011W THI2P38141 450 aa4.49□□□□□ -1.69
SOF1YLL011W YSW1P38280 609 aa4.49□□□□□ -1.69
SOF1YLL011W ETP1P38748 585 aaKnown RBP4.49□□□□□ -1.69
SOF1YLL011W HXT14P42833 540 aa4.49□□□□□ -1.69
SOF1YLL011W RPS7BP48164 190 aaKnown RBP4.49□□□□□ -1.69
SOF1YLL011W INP52P50942 1183 aa4.49□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 78.6 ms