RNA–Protein interactions for RNA: YJL087C

TRL1, Transcript of tRNA ligase, yeastyeast

Gene TRL1, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRL1YJL087C SMC3P47037 1230 aa2.1□□□□□ -2.07
TRL1YJL087C PET130P47065 347 aa2.1□□□□□ -2.07
TRL1YJL087C ALT2P52892 507 aa2.1□□□□□ -2.07
TRL1YJL087C STR3P53101 465 aaKnown RBP2.1□□□□□ -2.07
TRL1YJL087C SPC98P53540 846 aa2.1□□□□□ -2.07
TRL1YJL087C YPL034WQ03083 165 aa2.1□□□□□ -2.07
TRL1YJL087C RAD33Q04231 177 aa2.1□□□□□ -2.07
TRL1YJL087C TAP42Q04372 366 aa2.1□□□□□ -2.07
TRL1YJL087C DON1Q05610 365 aa2.1□□□□□ -2.07
TRL1YJL087C DUS4Q06063 367 aa2.1□□□□□ -2.07
TRL1YJL087C PHO92Q06390 306 aa2.1□□□□□ -2.07
TRL1YJL087C NOP6Q07623 225 aaKnown RBP2.1□□□□□ -2.07
TRL1YJL087C IZH3Q07959 543 aa2.1□□□□□ -2.07
TRL1YJL087C MED7Q08278 222 aa2.1□□□□□ -2.07
TRL1YJL087C SEC39Q12745 709 aa2.1□□□□□ -2.07
TRL1YJL087C GCD1P09032 578 aaPredicted RBP2.09□□□□□ -2.07
TRL1YJL087C EST1P17214 699 aaPredicted RBP2.09□□□□□ -2.07
TRL1YJL087C KGD2P19262 463 aaPredicted RBP2.09□□□□□ -2.07
TRL1YJL087C KGD1P20967 1014 aaKnown RBP2.09□□□□□ -2.07
TRL1YJL087C PRD1P25375 712 aa2.09□□□□□ -2.07
TRL1YJL087C RFA2P26754 273 aaKnown RBP2.09□□□□□ -2.07
TRL1YJL087C MSP1P28737 362 aa2.09□□□□□ -2.07
TRL1YJL087C YME2P32843 850 aa2.09□□□□□ -2.07
TRL1YJL087C MRPL7P36519 292 aa2.09□□□□□ -2.07
TRL1YJL087C ARO9P38840 513 aaPredicted RBP2.09□□□□□ -2.07
TRL1YJL087C MTG2P38860 518 aa2.09□□□□□ -2.07
TRL1YJL087C YDR089WP38966 869 aa2.09□□□□□ -2.07
TRL1YJL087C SER3P40054 469 aa2.09□□□□□ -2.07
TRL1YJL087C MKT1P40850 830 aaKnown RBP2.09□□□□□ -2.07
TRL1YJL087C HXT14P42833 540 aa2.09□□□□□ -2.07
TRL1YJL087C PRY1P47032 299 aa2.09□□□□□ -2.07
TRL1YJL087C EFM3P47163 339 aa2.09□□□□□ -2.07
TRL1YJL087C MSY1P48527 492 aa2.09□□□□□ -2.07
TRL1YJL087C INP52P50942 1183 aa2.09□□□□□ -2.07
TRL1YJL087C SHE10P53075 577 aa2.09□□□□□ -2.07
TRL1YJL087C MNP1P53163 194 aaPredicted RBP2.09□□□□□ -2.07
TRL1YJL087C GTF1P53260 183 aaPredicted RBP2.09□□□□□ -2.07
TRL1YJL087C ADA2Q02336 434 aa2.09□□□□□ -2.07
TRL1YJL087C MRI1Q06489 411 aaKnown RBP2.09□□□□□ -2.07
TRL1YJL087C SWA2Q06677 668 aa2.09□□□□□ -2.07
TRL1YJL087C DCI1Q08558 271 aa2.09□□□□□ -2.07
TRL1YJL087C MRN1Q08925 612 aaKnown RBP RIP-Chip data2.09□□□□□ -2.07not detected
TRL1YJL087C SGT2Q12118 346 aaKnown RBP2.09□□□□□ -2.07
TRL1YJL087C YDR215CQ12240 137 aa2.09□□□□□ -2.07
TRL1YJL087C MDY2Q12285 212 aa2.09□□□□□ -2.07
TRL1YJL087C YMR084WA2P2R3 262 aa2.09□□□□□ -2.08
TRL1YJL087C QCR6P00127 147 aa2.09□□□□□ -2.08
TRL1YJL087C PDA1P16387 420 aaKnown RBP2.09□□□□□ -2.08
TRL1YJL087C IDH2P28241 369 aaKnown RBP2.09□□□□□ -2.08
TRL1YJL087C CRM1P30822 1084 aaKnown RBP2.09□□□□□ -2.08
TRL1YJL087C AFG1P32317 509 aa2.09□□□□□ -2.08
TRL1YJL087C CDC5P32562 705 aa2.09□□□□□ -2.08
TRL1YJL087C IME2P32581 645 aa2.09□□□□□ -2.08
TRL1YJL087C SSE2P32590 693 aaKnown RBP2.09□□□□□ -2.08
TRL1YJL087C LIP5P32875 414 aa2.09□□□□□ -2.08
TRL1YJL087C NIP100P33420 868 aa2.09□□□□□ -2.08
TRL1YJL087C EBP2P36049 427 aaKnown RBP2.09□□□□□ -2.08
TRL1YJL087C MIC60P36112 540 aa2.09□□□□□ -2.08
TRL1YJL087C YPT10P38146 199 aa2.09□□□□□ -2.08
TRL1YJL087C CHS6P40955 746 aa2.09□□□□□ -2.08
TRL1YJL087C APT1P49435 187 aaKnown RBP2.09□□□□□ -2.08
TRL1YJL087C CTR1P49573 406 aa2.09□□□□□ -2.08
TRL1YJL087C FMS1P50264 508 aa2.09□□□□□ -2.08
TRL1YJL087C FHN1P53279 174 aa2.09□□□□□ -2.08
TRL1YJL087C VPS62P53285 467 aa2.09□□□□□ -2.08
TRL1YJL087C PDR16P53860 351 aaKnown RBP2.09□□□□□ -2.08
TRL1YJL087C RIA1P53893 1110 aa2.09□□□□□ -2.08
TRL1YJL087C TOF2Q02208 771 aa2.09□□□□□ -2.08
TRL1YJL087C FIN1Q03898 291 aa2.09□□□□□ -2.08
TRL1YJL087C SPH1Q06160 661 aa2.09□□□□□ -2.08
TRL1YJL087C BMS1Q08965 1183 aaKnown RBP2.09□□□□□ -2.08
TRL1YJL087C RLM1Q12224 676 aa2.09□□□□□ -2.08
TRL1YJL087C UBX3Q12229 455 aa2.09□□□□□ -2.08
TRL1YJL087C HER1Q12276 1246 aa2.09□□□□□ -2.08
TRL1YJL087C NPC2Q12408 173 aa2.09□□□□□ -2.08
TRL1YJL087C RPP2AP05319 106 aaKnown RBP2.08□□□□□ -2.08
TRL1YJL087C HIP1P06775 603 aa2.08□□□□□ -2.08
TRL1YJL087C LPD1P09624 499 aaKnown RBP2.08□□□□□ -2.08
TRL1YJL087C ARO3P14843 370 aaKnown RBP2.08□□□□□ -2.08
TRL1YJL087C KAR4P25583 335 aa2.08□□□□□ -2.08
TRL1YJL087C PHO91P27514 894 aa2.08□□□□□ -2.08
TRL1YJL087C SRB2P34162 210 aa2.08□□□□□ -2.08
TRL1YJL087C OMA1P36163 345 aa2.08□□□□□ -2.08
TRL1YJL087C AGP2P38090 596 aa2.08□□□□□ -2.08
TRL1YJL087C SKN7P38889 622 aa2.08□□□□□ -2.08
TRL1YJL087C HRB1P38922 454 aaKnown RBP RIP-Chip data2.08□□□□□ -2.08not detected
TRL1YJL087C SEC31P38968 1273 aaKnown RBP2.08□□□□□ -2.08
TRL1YJL087C ELO3P40319 345 aa2.08□□□□□ -2.08
TRL1YJL087C MAF1P41910 395 aa2.08□□□□□ -2.08
TRL1YJL087C YFL066CP43538 392 aa2.08□□□□□ -2.08
TRL1YJL087C IRC8P47046 822 aa2.08□□□□□ -2.08
TRL1YJL087C MPS3P47069 682 aa2.08□□□□□ -2.08
TRL1YJL087C ECM27P47144 725 aa2.08□□□□□ -2.08
TRL1YJL087C MSE1P48525 536 aa2.08□□□□□ -2.08
TRL1YJL087C IMD4P50094 524 aaKnown RBP2.08□□□□□ -2.08
TRL1YJL087C VID30P53076 958 aa2.08□□□□□ -2.08
TRL1YJL087C RPT4P53549 437 aaKnown RBP2.08□□□□□ -2.08
TRL1YJL087C RHO5P53879 331 aaKnown RBP2.08□□□□□ -2.08
TRL1YJL087C MAK10Q02197 733 aa2.08□□□□□ -2.08
TRL1YJL087C ROT1Q03691 256 aa2.08□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 28.1 ms