RNA–Protein interactions for RNA: YHR113W

APE4, Transcript of Cytoplasmic aspartyl aminopeptidase with possible vacuole function, yeastyeast

Gene APE4, Length 1,473 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
APE4YHR113W SFP1P32432 683 aa6.87□□□□□ -1.31
APE4YHR113W RIM1P32445 135 aaKnown RBP6.87□□□□□ -1.31
APE4YHR113W PRP18P33411 251 aaPredicted RBP6.87□□□□□ -1.31
APE4YHR113W STB6P36085 766 aa6.87□□□□□ -1.31
APE4YHR113W GND1P38720 489 aaKnown RBP6.87□□□□□ -1.31
APE4YHR113W PCL5P38794 229 aa6.87□□□□□ -1.31
APE4YHR113W MGS1P40151 587 aa6.87□□□□□ -1.31
APE4YHR113W IME4P41833 600 aa6.87□□□□□ -1.31
APE4YHR113W ARX1Q03862 593 aaKnown RBP6.87□□□□□ -1.31
APE4YHR113W HPT1Q04178 221 aaKnown RBP6.87□□□□□ -1.31
APE4YHR113W HPF1Q05164 967 aa6.87□□□□□ -1.31
APE4YHR113W NUS1Q12063 375 aa6.87□□□□□ -1.31
APE4YHR113W Q0182Q9ZZW1 134 aa6.87□□□□□ -1.31
APE4YHR113W MSB2P32334 1306 aa6.87□□□□□ -1.31
APE4YHR113W GLN4P13188 809 aaKnown RBP6.86□□□□□ -1.31
APE4YHR113W GAL11P19659 1081 aa6.86□□□□□ -1.31
APE4YHR113W CHL1P22516 861 aaPredicted RBP6.86□□□□□ -1.31
APE4YHR113W AAD3P25612 363 aa6.86□□□□□ -1.31
APE4YHR113W CCR4P31384 837 aaKnown RBP6.86□□□□□ -1.31
APE4YHR113W MF(ALPHA)2P32435 120 aa6.86□□□□□ -1.31
APE4YHR113W YSW1P38280 609 aa6.86□□□□□ -1.31
APE4YHR113W BAT1P38891 393 aaKnown RBP6.86□□□□□ -1.31
APE4YHR113W YFR018CP43599 363 aa6.86□□□□□ -1.31
APE4YHR113W TFB2Q02939 513 aa6.86□□□□□ -1.31
APE4YHR113W YMR209CQ03648 457 aa6.86□□□□□ -1.31
APE4YHR113W YDL129WQ07555 291 aa6.86□□□□□ -1.31
APE4YHR113W BUD7Q08754 746 aa6.86□□□□□ -1.31
APE4YHR113W YOR223WQ12015 292 aa6.86□□□□□ -1.31
APE4YHR113W CHS5Q12114 671 aaKnown RBP6.86□□□□□ -1.31
APE4YHR113W KCS1Q12494 1050 aa6.86□□□□□ -1.31
APE4YHR113W RGS2Q99188 309 aa6.86□□□□□ -1.31
APE4YHR113W CPA1P07258 411 aaKnown RBP6.85□□□□□ -1.31
APE4YHR113W SEC53P07283 254 aaKnown RBP6.85□□□□□ -1.31
APE4YHR113W SBP1P10080 294 aaKnown RBP6.85□□□□□ -1.31
APE4YHR113W APA1P16550 321 aaKnown RBP6.85□□□□□ -1.31
APE4YHR113W SRV2P17555 526 aaKnown RBP6.85□□□□□ -1.31
APE4YHR113W SPS19P32573 292 aaKnown RBP6.85□□□□□ -1.31
APE4YHR113W ASK1P35734 292 aa6.85□□□□□ -1.31
APE4YHR113W PHO11P35842 467 aa6.85□□□□□ -1.31
APE4YHR113W SRX1P36077 127 aa6.85□□□□□ -1.31
APE4YHR113W PHO12P38693 467 aa6.85□□□□□ -1.31
APE4YHR113W LIN1P38852 340 aaPredicted RBP6.85□□□□□ -1.31
APE4YHR113W TIM17P39515 158 aa6.85□□□□□ -1.31
APE4YHR113W RPH1P39956 796 aa6.85□□□□□ -1.31
APE4YHR113W LSM5P40089 93 aaKnown RBP6.85□□□□□ -1.31
APE4YHR113W YGL108CP53139 140 aa6.85□□□□□ -1.31
APE4YHR113W BUD32P53323 261 aa6.85□□□□□ -1.31
APE4YHR113W UBX4P54730 416 aa6.85□□□□□ -1.31
APE4YHR113W SLT2Q00772 484 aa6.85□□□□□ -1.31
APE4YHR113W TAF11Q04226 346 aa6.85□□□□□ -1.31
APE4YHR113W EMI1Q04406 187 aa6.85□□□□□ -1.31
APE4YHR113W NUT2Q06213 157 aa6.85□□□□□ -1.31
APE4YHR113W YLR177WQ06251 628 aa6.85□□□□□ -1.31
APE4YHR113W YMR030W-AQ3E760 96 aa6.85□□□□□ -1.31
APE4YHR113W NAG1Q8TGN9 163 aa6.85□□□□□ -1.31
APE4YHR113W UBR1P19812 1950 aa6.85□□□□□ -1.31
APE4YHR113W STE2D6VTK4 431 aa6.85□□□□□ -1.31
APE4YHR113W YKR104WP0CE69 306 aa6.85□□□□□ -1.31
APE4YHR113W EPT1P22140 391 aa6.85□□□□□ -1.31
APE4YHR113W NUD1P32336 851 aa6.85□□□□□ -1.31
APE4YHR113W RRN3P36070 627 aa6.85□□□□□ -1.31
APE4YHR113W PHO89P38361 574 aa6.85□□□□□ -1.31
APE4YHR113W RRP3P38712 501 aaKnown RBP6.85□□□□□ -1.31
APE4YHR113W EFM1P38732 585 aa6.85□□□□□ -1.31
APE4YHR113W CYC2P38909 366 aa6.85□□□□□ -1.31
APE4YHR113W TIF34P40217 347 aaKnown RBP6.85□□□□□ -1.31
APE4YHR113W PEP8P40335 379 aa6.85□□□□□ -1.31
APE4YHR113W YJL070CP40361 888 aa6.85□□□□□ -1.31
APE4YHR113W GTS1P40956 396 aa6.85□□□□□ -1.31
APE4YHR113W CCT8P47079 568 aaKnown RBP6.85□□□□□ -1.31
APE4YHR113W NNF1P47149 201 aa6.85□□□□□ -1.31
APE4YHR113W MNN10P50108 393 aaKnown RBP6.85□□□□□ -1.31
APE4YHR113W CAF120P53836 1060 aa6.85□□□□□ -1.31
APE4YHR113W TAF12Q03761 539 aa6.85□□□□□ -1.31
APE4YHR113W CSN9Q03981 162 aa6.85□□□□□ -1.31
APE4YHR113W ARG7Q04728 441 aa6.85□□□□□ -1.31
APE4YHR113W MFB1Q04922 465 aa6.85□□□□□ -1.31
APE4YHR113W FAR8Q05040 523 aa6.85□□□□□ -1.31
APE4YHR113W HEL2Q05580 639 aaKnown RBP6.85□□□□□ -1.31
APE4YHR113W TRM8Q12009 286 aa6.85□□□□□ -1.31
APE4YHR113W SMF3Q12078 473 aaPredicted RBP6.85□□□□□ -1.31
APE4YHR113W GCY1P14065 312 aaKnown RBP RIP-Chip data6.84□□□□□ -1.31not detected
APE4YHR113W ABF1P14164 731 aa6.84□□□□□ -1.31
APE4YHR113W RPB4P20433 221 aaPredicted RBP6.84□□□□□ -1.31
APE4YHR113W AMD2P22580 549 aa6.84□□□□□ -1.31
APE4YHR113W PHO3P24031 467 aa6.84□□□□□ -1.31
APE4YHR113W PHA2P32452 334 aa6.84□□□□□ -1.31
APE4YHR113W YKL151CP36059 337 aa6.84□□□□□ -1.31
APE4YHR113W DBP8P38719 431 aa6.84□□□□□ -1.31
APE4YHR113W YHR182WP38870 785 aa6.84□□□□□ -1.31
APE4YHR113W PCF11P39081 626 aaPredicted RBP6.84□□□□□ -1.31
APE4YHR113W HAT2P39984 401 aa6.84□□□□□ -1.31
APE4YHR113W SET2P46995 733 aaKnown RBP6.84□□□□□ -1.31
APE4YHR113W LIA1P47120 325 aaKnown RBP6.84□□□□□ -1.31
APE4YHR113W BOL2P53082 120 aa6.84□□□□□ -1.31
APE4YHR113W RSC3Q06639 885 aa6.84□□□□□ -1.31
APE4YHR113W UBX3Q12229 455 aa6.84□□□□□ -1.31
APE4YHR113W SLP1Q12232 587 aa6.84□□□□□ -1.31
APE4YHR113W RMD5Q12508 421 aa6.84□□□□□ -1.31
APE4YHR113W VAN1P23642 535 aa6.83□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms