RNA–Protein interactions for RNA: YHR099W

TRA1, Transcript of Subunit of SAGA and NuA4 histone acetyltransferase complexes, yeastyeast

Gene TRA1, Length 11,235 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRA1YHR099W MKS1P34072 584 aa2.44□□□□□ -2.02
TRA1YHR099W SEN34P39707 275 aa2.44□□□□□ -2.02
TRA1YHR099W KRE29P40026 464 aa2.44□□□□□ -2.02
TRA1YHR099W SNZ3P43545 298 aa2.44□□□□□ -2.02
TRA1YHR099W YMR1P47147 688 aaKnown RBP RIP-Chip data2.44□□□□□ -2.02not detected
TRA1YHR099W ATP22P50273 684 aaPredicted RBP2.44□□□□□ -2.02
TRA1YHR099W SNZ2P53824 298 aa2.44□□□□□ -2.02
TRA1YHR099W MRX10Q05648 414 aa2.44□□□□□ -2.02
TRA1YHR099W OXR1Q08952 273 aa2.44□□□□□ -2.02
TRA1YHR099W SCM3Q12334 223 aa2.44□□□□□ -2.02
TRA1YHR099W COA2Q3E823 68 aa2.44□□□□□ -2.02
TRA1YHR099W RPS3P05750 240 aaKnown RBP2.43□□□□□ -2.02
TRA1YHR099W CDC24P11433 854 aaPredicted RBP2.43□□□□□ -2.02
TRA1YHR099W FUS3P16892 353 aaKnown RBP2.43□□□□□ -2.02
TRA1YHR099W ANP1P32629 500 aa2.43□□□□□ -2.02
TRA1YHR099W KAE1P36132 386 aa2.43□□□□□ -2.02
TRA1YHR099W FOL1P53848 824 aa2.43□□□□□ -2.02
TRA1YHR099W ACS1Q01574 713 aa2.43□□□□□ -2.02
TRA1YHR099W YMR087WQ04299 284 aa2.43□□□□□ -2.02
TRA1YHR099W THP3Q12049 470 aaKnown RBP2.43□□□□□ -2.02
TRA1YHR099W RRG1Q12167 365 aaPredicted RBP2.43□□□□□ -2.02
TRA1YHR099W PFK27Q12471 397 aaPredicted RBP2.43□□□□□ -2.02
TRA1YHR099W CET1O13297 549 aaPredicted RBP2.43□□□□□ -2.02
TRA1YHR099W FBP1P09201 348 aa2.43□□□□□ -2.02
TRA1YHR099W FRS1P15624 595 aaKnown RBP2.43□□□□□ -2.02
TRA1YHR099W SEC18P18759 758 aaKnown RBP2.43□□□□□ -2.02
TRA1YHR099W MGT1P26188 188 aa2.43□□□□□ -2.02
TRA1YHR099W MCM10P32354 571 aa2.43□□□□□ -2.02
TRA1YHR099W YBR259WP38338 688 aa2.43□□□□□ -2.02
TRA1YHR099W CSN12P47130 423 aa2.43□□□□□ -2.02
TRA1YHR099W GCV1P48015 400 aa2.43□□□□□ -2.02
TRA1YHR099W YNL040WP53960 456 aaPredicted RBP2.43□□□□□ -2.02
TRA1YHR099W ATG31Q12421 196 aa2.43□□□□□ -2.02
TRA1YHR099W SFG1Q12507 346 aa2.43□□□□□ -2.02
TRA1YHR099W THP2O13539 261 aaKnown RBP2.43□□□□□ -2.02
TRA1YHR099W MCK1P21965 375 aaKnown RBP2.43□□□□□ -2.02
TRA1YHR099W RPL16AP26784 199 aaKnown RBP2.43□□□□□ -2.02
TRA1YHR099W PMI40P29952 429 aaKnown RBP2.43□□□□□ -2.02
TRA1YHR099W SRY1P36007 326 aa2.43□□□□□ -2.02
TRA1YHR099W UBP7P40453 1071 aa2.43□□□□□ -2.02
TRA1YHR099W ATG32P40458 529 aa2.43□□□□□ -2.02
TRA1YHR099W CIN5P40917 295 aa2.43□□□□□ -2.02
TRA1YHR099W ARC1P46672 376 aaKnown RBP2.43□□□□□ -2.02
TRA1YHR099W APC4Q04601 652 aa2.43□□□□□ -2.02
TRA1YHR099W NSE1Q07913 336 aa2.43□□□□□ -2.02
TRA1YHR099W ARG3P05150 338 aa2.43□□□□□ -2.02
TRA1YHR099W PMR1P13586 950 aa2.43□□□□□ -2.02
TRA1YHR099W HAP4P14064 554 aa2.43□□□□□ -2.02
TRA1YHR099W UBA1P22515 1024 aaKnown RBP2.43□□□□□ -2.02
TRA1YHR099W OXP1P28273 1286 aa2.43□□□□□ -2.02
TRA1YHR099W PTC3P34221 468 aaKnown RBP2.43□□□□□ -2.02
TRA1YHR099W FMP23P38231 175 aa2.43□□□□□ -2.02
TRA1YHR099W IPI1P38803 334 aaPredicted RBP2.43□□□□□ -2.02
TRA1YHR099W VMA7P39111 118 aa2.43□□□□□ -2.02
TRA1YHR099W THI12P42883 340 aa2.43□□□□□ -2.02
TRA1YHR099W THI5P43534 340 aa2.43□□□□□ -2.02
TRA1YHR099W THI11P47183 340 aa2.43□□□□□ -2.02
TRA1YHR099W GTO1P48239 356 aa2.43□□□□□ -2.02
TRA1YHR099W PKP2P53170 491 aa2.43□□□□□ -2.02
TRA1YHR099W YGR168CP53293 376 aa2.43□□□□□ -2.02
TRA1YHR099W YKR011CQ02209 353 aa2.43□□□□□ -2.02
TRA1YHR099W YLR345WQ06137 509 aa2.43□□□□□ -2.02
TRA1YHR099W GUD1Q07729 489 aa2.43□□□□□ -2.02
TRA1YHR099W THI13Q07748 340 aa2.43□□□□□ -2.02
TRA1YHR099W RKM5Q12367 367 aa2.43□□□□□ -2.02
TRA1YHR099W REV3P14284 1504 aa2.43□□□□□ -2.02
TRA1YHR099W DST1P07273 309 aa2.43□□□□□ -2.02
TRA1YHR099W GFA1P14742 717 aaKnown RBP2.43□□□□□ -2.02
TRA1YHR099W ACO1P19414 778 aaKnown RBP RIP-Chip data2.43□□□□□ -2.02not detected
TRA1YHR099W RMA1P36001 430 aaKnown RBP2.43□□□□□ -2.02
TRA1YHR099W HMT1P38074 348 aa2.43□□□□□ -2.02
TRA1YHR099W PDX3P38075 228 aaKnown RBP2.43□□□□□ -2.02
TRA1YHR099W PEX32P38292 413 aa2.43□□□□□ -2.02
TRA1YHR099W SAW1P39735 261 aa2.43□□□□□ -2.02
TRA1YHR099W YJR061WP40355 935 aa2.43□□□□□ -2.02
TRA1YHR099W YJL132WP47014 750 aa2.43□□□□□ -2.02
TRA1YHR099W RAI1P53063 387 aaKnown RBP2.43□□□□□ -2.02
TRA1YHR099W SLX9P53251 210 aaPredicted RBP2.43□□□□□ -2.02
TRA1YHR099W HDA1P53973 706 aa2.43□□□□□ -2.02
TRA1YHR099W RIF2Q06208 395 aa2.43□□□□□ -2.02
TRA1YHR099W FRE5Q08908 694 aa2.43□□□□□ -2.02
TRA1YHR099W RKM1Q08961 583 aaPredicted RBP2.43□□□□□ -2.02
TRA1YHR099W VTH1P40438 1549 aa2.43□□□□□ -2.02
TRA1YHR099W VTH2P40890 1549 aa2.43□□□□□ -2.02
TRA1YHR099W SPO14P36126 1683 aa2.43□□□□□ -2.02
TRA1YHR099W PBS2P08018 668 aa2.43□□□□□ -2.02
TRA1YHR099W MET16P18408 261 aaPredicted RBP2.43□□□□□ -2.02
TRA1YHR099W KRR1P25586 316 aaPredicted RBP2.43□□□□□ -2.02
TRA1YHR099W RSM22P36056 628 aa2.43□□□□□ -2.02
TRA1YHR099W YBR053CP38235 358 aa2.43□□□□□ -2.02
TRA1YHR099W LYS9P38999 446 aa2.43□□□□□ -2.02
TRA1YHR099W PKP1P40530 394 aa2.43□□□□□ -2.02
TRA1YHR099W GAB1P41733 394 aa2.43□□□□□ -2.02
TRA1YHR099W PRP24P49960 444 aaKnown RBP2.43□□□□□ -2.02
TRA1YHR099W UBC11P52492 156 aa2.43□□□□□ -2.02
TRA1YHR099W RRT6P53117 311 aaPredicted RBP2.43□□□□□ -2.02
TRA1YHR099W YMR160WQ03823 816 aa2.43□□□□□ -2.02
TRA1YHR099W ARO80Q04052 950 aa2.43□□□□□ -2.02
TRA1YHR099W CIA1Q05583 330 aa2.43□□□□□ -2.02
TRA1YHR099W RCL1Q08096 367 aaPredicted RBP2.43□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms