RNA–Protein interactions for RNA: YHR038W

RRF1, Transcript of Mitochondrial ribosome recycling factor, yeastyeast

Gene RRF1, Length 693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRF1YHR038W TFC3P34111 1160 aa2.63□□□□□ -1.99
RRF1YHR038W UBP13P38187 747 aa2.63□□□□□ -1.99
RRF1YHR038W HIS6P40545 261 aa2.63□□□□□ -1.99
RRF1YHR038W YIR014WP40570 242 aa2.63□□□□□ -1.99
RRF1YHR038W CTK2P46962 323 aa2.63□□□□□ -1.99
RRF1YHR038W PAP2P53632 584 aaKnown RBP2.63□□□□□ -1.99
RRF1YHR038W STP3Q05937 343 aa2.63□□□□□ -1.99
RRF1YHR038W EDE1P34216 1381 aa2.62□□□□□ -1.99
RRF1YHR038W TOP1P04786 769 aa2.62□□□□□ -1.99
RRF1YHR038W YML003WP0CF16 290 aa2.62□□□□□ -1.99
RRF1YHR038W PTP2P29461 750 aa2.62□□□□□ -1.99
RRF1YHR038W YNK1P36010 153 aaKnown RBP2.62□□□□□ -1.99
RRF1YHR038W AAP1P37898 856 aaKnown RBP2.62□□□□□ -1.99
RRF1YHR038W GRX7P38068 203 aa2.62□□□□□ -1.99
RRF1YHR038W YGL082WP53155 381 aa2.62□□□□□ -1.99
RRF1YHR038W NNF2P53253 936 aa2.62□□□□□ -1.99
RRF1YHR038W CWC22P53333 577 aaKnown RBP2.62□□□□□ -1.99
RRF1YHR038W ASI1P54074 624 aa2.62□□□□□ -1.99
RRF1YHR038W MAK10Q02197 733 aa2.62□□□□□ -1.99
RRF1YHR038W YMR178WQ03219 274 aaKnown RBP2.62□□□□□ -1.99
RRF1YHR038W PPT2Q12036 173 aa2.62□□□□□ -1.99
RRF1YHR038W HXK2P04807 486 aaKnown RBP2.61□□□□□ -1.99
RRF1YHR038W RAD16P31244 790 aa2.61□□□□□ -1.99
RRF1YHR038W YBP1P38315 674 aa2.61□□□□□ -1.99
RRF1YHR038W NPR3P38742 1146 aa2.61□□□□□ -1.99
RRF1YHR038W SEC31P38968 1273 aaKnown RBP2.61□□□□□ -1.99
RRF1YHR038W PSF2P40359 213 aa2.61□□□□□ -1.99
RRF1YHR038W YJL068CP40363 299 aa2.61□□□□□ -1.99
RRF1YHR038W RTS2P40962 232 aa2.61□□□□□ -1.99
RRF1YHR038W BOR1P53838 576 aa2.61□□□□□ -1.99
RRF1YHR038W MET14Q02196 202 aa2.61□□□□□ -1.99
RRF1YHR038W EKI1Q03764 534 aa2.61□□□□□ -1.99
RRF1YHR038W PLP2Q12017 286 aa2.61□□□□□ -1.99
RRF1YHR038W BSC1Q12140 328 aa2.61□□□□□ -1.99
RRF1YHR038W NYV1Q12255 253 aa2.61□□□□□ -1.99
RRF1YHR038W ERG27Q12452 347 aaKnown RBP2.61□□□□□ -1.99
RRF1YHR038W QCR6P00127 147 aa2.6□□□□□ -1.99
RRF1YHR038W HSP82P02829 709 aaKnown RBP2.6□□□□□ -1.99
RRF1YHR038W YEF3P16521 1044 aaKnown RBP2.6□□□□□ -1.99
RRF1YHR038W NCP1P16603 691 aaKnown RBP2.6□□□□□ -1.99
RRF1YHR038W YSP3P25036 478 aa2.6□□□□□ -1.99
RRF1YHR038W GID7P25569 745 aa2.6□□□□□ -1.99
RRF1YHR038W NTR2P36118 322 aaPredicted RBP2.6□□□□□ -1.99
RRF1YHR038W ECM10P39987 644 aa2.6□□□□□ -1.99
RRF1YHR038W RGI2P40188 164 aa2.6□□□□□ -1.99
RRF1YHR038W DIM1P41819 318 aaKnown RBP2.6□□□□□ -1.99
RRF1YHR038W PEX8P53248 589 aa2.6□□□□□ -1.99
RRF1YHR038W IST1P53843 298 aaPredicted RBP2.6□□□□□ -1.99
RRF1YHR038W TGL2P54857 326 aa2.6□□□□□ -1.99
RRF1YHR038W RSM28Q03430 361 aa2.6□□□□□ -1.99
RRF1YHR038W BRE1Q07457 700 aaKnown RBP2.6□□□□□ -1.99
RRF1YHR038W YDL218WQ07629 317 aa2.6□□□□□ -1.99
RRF1YHR038W TPK1P06244 397 aa2.59□□□□□ -1.99
RRF1YHR038W PET111P08468 800 aa2.59□□□□□ -1.99
RRF1YHR038W SPE2P21182 396 aa2.59□□□□□ -1.99
RRF1YHR038W CLB2P24869 491 aa2.59□□□□□ -1.99
RRF1YHR038W ESL2P36168 1195 aa2.59□□□□□ -1.99
RRF1YHR038W ERG7P38604 731 aa2.59□□□□□ -1.99
RRF1YHR038W PUG1P40100 303 aa2.59□□□□□ -1.99
RRF1YHR038W MOT3P54785 490 aaKnown RBP2.59□□□□□ -1.99
RRF1YHR038W VAM6Q07468 1049 aa2.59□□□□□ -1.99
RRF1YHR038W GAL1P04385 528 aa2.58□□□□□ -2
RRF1YHR038W MDM31P38880 579 aa2.58□□□□□ -2
RRF1YHR038W SPC72P39723 622 aa2.58□□□□□ -2
RRF1YHR038W RPT2P40327 437 aaKnown RBP2.58□□□□□ -2
RRF1YHR038W IST3P40565 148 aaPredicted RBP2.58□□□□□ -2
RRF1YHR038W RPN11P43588 306 aaKnown RBP2.58□□□□□ -2
RRF1YHR038W SMC3P47037 1230 aa2.58□□□□□ -2
RRF1YHR038W YTP1P53584 459 aa2.58□□□□□ -2
RRF1YHR038W RDR1Q08904 546 aa2.58□□□□□ -2
RRF1YHR038W APL4Q12028 832 aa2.58□□□□□ -2
RRF1YHR038W YLL056CQ12177 298 aa2.58□□□□□ -2
RRF1YHR038W CHO1P08456 276 aa2.57□□□□□ -2
RRF1YHR038W NUC1P08466 329 aa2.57□□□□□ -2
RRF1YHR038W MSS18P08593 268 aa2.57□□□□□ -2
RRF1YHR038W PFK2P16862 959 aaKnown RBP RIP-Chip data2.57□□□□□ -2not detected
RRF1YHR038W GLN3P18494 730 aa2.57□□□□□ -2
RRF1YHR038W SRP54P20424 541 aaKnown RBP2.57□□□□□ -2
RRF1YHR038W MCM4P30665 933 aaKnown RBP2.57□□□□□ -2
RRF1YHR038W PFK26P40433 827 aaKnown RBP2.57□□□□□ -2
RRF1YHR038W YPI1P43587 155 aa2.57□□□□□ -2
RRF1YHR038W COG1P53079 417 aa2.57□□□□□ -2
RRF1YHR038W MDG1P53885 366 aa2.57□□□□□ -2
RRF1YHR038W YEH2Q07950 538 aa2.57□□□□□ -2
RRF1YHR038W TMA16Q08687 178 aa2.57□□□□□ -2
RRF1YHR038W COX17Q12287 69 aa2.57□□□□□ -2
RRF1YHR038W SKI3P17883 1432 aaKnown RBP2.57□□□□□ -2
RRF1YHR038W ATP4P05626 244 aa2.56□□□□□ -2
RRF1YHR038W LCB1P25045 558 aaKnown RBP2.56□□□□□ -2
RRF1YHR038W SRB5P32585 307 aa2.56□□□□□ -2
RRF1YHR038W TOM20P35180 183 aa2.56□□□□□ -2
RRF1YHR038W YKL050CP35736 922 aa2.56□□□□□ -2
RRF1YHR038W MIA40P36046 403 aa2.56□□□□□ -2
RRF1YHR038W YBR138CP38277 524 aa2.56□□□□□ -2
RRF1YHR038W MTC6P38849 526 aa2.56□□□□□ -2
RRF1YHR038W YFR020WP43600 232 aa2.56□□□□□ -2
RRF1YHR038W RRP6Q12149 733 aaKnown RBP2.56□□□□□ -2
RRF1YHR038W TY2A-LR1P0C2J4 438 aa2.55□□□□□ -2
RRF1YHR038W TY2A-FP0CX61 438 aa2.55□□□□□ -2
RRF1YHR038W TY2A-GR2P0CX62 438 aa2.55□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 44.8 ms