RNA–Protein interactions for RNA: YHL028W

WSC4, Transcript of Endoplasmic reticulum (ER) membrane protein, yeast

Gene WSC4, Length 1,818 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
WSC4	YHL028W	SRL4	Q03085	281 aa		7.78	□□□□□ -1.16
WSC4	YHL028W	SPC2	Q04969	178 aa		7.78	□□□□□ -1.16
WSC4	YHL028W	ECM38	Q05902	660 aa	Predicted RBP	7.78	□□□□□ -1.16
WSC4	YHL028W	PMT7	Q06644	662 aa		7.78	□□□□□ -1.16
WSC4	YHL028W	UBX3	Q12229	455 aa		7.78	□□□□□ -1.16
WSC4	YHL028W	NTO1	Q12311	748 aa		7.78	□□□□□ -1.16
WSC4	YHL028W	YPL247C	Q12523	523 aa		7.78	□□□□□ -1.16
WSC4	YHL028W	SPE1	P08432	466 aa		7.77	□□□□□ -1.17
WSC4	YHL028W	POT1	P27796	417 aa	Known RBP RIP-Chip data	7.77	□□□□□ -1.17	not detected
WSC4	YHL028W	MET4	P32389	672 aa		7.77	□□□□□ -1.17
WSC4	YHL028W	PTH2	P34222	208 aa		7.77	□□□□□ -1.17
WSC4	YHL028W	PEX18	P38855	283 aa		7.77	□□□□□ -1.17
WSC4	YHL028W	SKI8	Q02793	397 aa	Predicted RBP	7.77	□□□□□ -1.17
WSC4	YHL028W	RPN9	Q04062	393 aa	Known RBP	7.77	□□□□□ -1.17
WSC4	YHL028W	SMP3	Q04174	516 aa		7.77	□□□□□ -1.17
WSC4	YHL028W	FMP42	Q04991	504 aa		7.77	□□□□□ -1.17
WSC4	YHL028W	ECM22	Q05958	814 aa	Predicted RBP	7.77	□□□□□ -1.17
WSC4	YHL028W	SEC10	Q06245	871 aa		7.77	□□□□□ -1.17
WSC4	YHL028W	APM4	Q99186	491 aa		7.77	□□□□□ -1.17
WSC4	YHL028W	URE2	P23202	354 aa	Known RBP	7.76	□□□□□ -1.17
WSC4	YHL028W	ADK2	P26364	225 aa		7.76	□□□□□ -1.17
WSC4	YHL028W	DSS4	P32601	143 aa		7.76	□□□□□ -1.17
WSC4	YHL028W	GCS1	P35197	352 aa		7.76	□□□□□ -1.17
WSC4	YHL028W	MRP21	P38175	177 aa		7.76	□□□□□ -1.17
WSC4	YHL028W	RIM11	P38615	370 aa		7.76	□□□□□ -1.17
WSC4	YHL028W	UTP9	P38882	575 aa	Known RBP	7.76	□□□□□ -1.17
WSC4	YHL028W	ELO3	P40319	345 aa		7.76	□□□□□ -1.17
WSC4	YHL028W	UBP7	P40453	1071 aa		7.76	□□□□□ -1.17
WSC4	YHL028W	DSL1	P53847	754 aa		7.76	□□□□□ -1.17
WSC4	YHL028W	NAN1	Q02931	896 aa	Known RBP	7.76	□□□□□ -1.17
WSC4	YHL028W	GCN5	Q03330	439 aa		7.76	□□□□□ -1.17
WSC4	YHL028W	YDR239C	Q03780	787 aa		7.76	□□□□□ -1.17
WSC4	YHL028W	HDA3	Q06623	655 aa		7.76	□□□□□ -1.17
WSC4	YHL028W	YEH2	Q07950	538 aa		7.76	□□□□□ -1.17
WSC4	YHL028W	RPN8	Q08723	338 aa	Known RBP	7.76	□□□□□ -1.17
WSC4	YHL028W	LEA1	Q08963	238 aa	Predicted RBP	7.76	□□□□□ -1.17
WSC4	YHL028W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	7.75	□□□□□ -1.17	not detected
WSC4	YHL028W	RPS5	P26783	225 aa	Known RBP	7.75	□□□□□ -1.17
WSC4	YHL028W	RPT5	P33297	434 aa	Known RBP	7.75	□□□□□ -1.17
WSC4	YHL028W	MSC7	P38694	644 aa		7.75	□□□□□ -1.17
WSC4	YHL028W	PCF11	P39081	626 aa	Predicted RBP	7.75	□□□□□ -1.17
WSC4	YHL028W	EMC2	P47133	292 aa	Known RBP	7.75	□□□□□ -1.17
WSC4	YHL028W	YNL010W	P53981	241 aa	Known RBP	7.75	□□□□□ -1.17
WSC4	YHL028W	LSM3	P57743	89 aa	Known RBP	7.75	□□□□□ -1.17
WSC4	YHL028W	TFB3	Q03290	321 aa		7.75	□□□□□ -1.17
WSC4	YHL028W	TAF12	Q03761	539 aa		7.75	□□□□□ -1.17
WSC4	YHL028W	SPO71	Q03868	1245 aa		7.75	□□□□□ -1.17
WSC4	YHL028W	GRX8	Q05926	109 aa		7.75	□□□□□ -1.17
WSC4	YHL028W	ESA1	Q08649	445 aa		7.75	□□□□□ -1.17
WSC4	YHL028W	LCB4	Q12246	624 aa		7.75	□□□□□ -1.17
WSC4	YHL028W	MDY2	Q12285	212 aa		7.75	□□□□□ -1.17
WSC4	YHL028W	COR1	P07256	457 aa		7.75	□□□□□ -1.17
WSC4	YHL028W	CAD1	P24813	409 aa	Known RBP	7.75	□□□□□ -1.17
WSC4	YHL028W	BUD23	P25627	275 aa	Predicted RBP	7.75	□□□□□ -1.17
WSC4	YHL028W	TPO5	P36029	618 aa		7.75	□□□□□ -1.17
WSC4	YHL028W	BRL1	P38770	471 aa		7.75	□□□□□ -1.17
WSC4	YHL028W	YJR061W	P40355	935 aa		7.75	□□□□□ -1.17
WSC4	YHL028W	YIR007W	P40566	764 aa		7.75	□□□□□ -1.17
WSC4	YHL028W	CCT7	P42943	550 aa	Known RBP	7.75	□□□□□ -1.17
WSC4	YHL028W	YNL058C	P53947	316 aa		7.75	□□□□□ -1.17
WSC4	YHL028W	CDC14	Q00684	551 aa		7.75	□□□□□ -1.17
WSC4	YHL028W	MET14	Q02196	202 aa		7.75	□□□□□ -1.17
WSC4	YHL028W	NUP100	Q02629	959 aa		7.75	□□□□□ -1.17
WSC4	YHL028W	RMI1	Q02685	241 aa		7.75	□□□□□ -1.17
WSC4	YHL028W	JIP5	Q06214	492 aa	Predicted RBP	7.75	□□□□□ -1.17
WSC4	YHL028W	MCM21	Q06675	368 aa		7.75	□□□□□ -1.17
WSC4	YHL028W	TRE2	Q08693	809 aa		7.75	□□□□□ -1.17
WSC4	YHL028W	YOR342C	Q12182	319 aa		7.75	□□□□□ -1.17
WSC4	YHL028W	RMD5	Q12508	421 aa		7.75	□□□□□ -1.17
WSC4	YHL028W	VCX1	Q99385	411 aa		7.75	□□□□□ -1.17
WSC4	YHL028W	TRP3	P00937	484 aa		7.74	□□□□□ -1.17
WSC4	YHL028W	AMD1	P15274	810 aa	Known RBP	7.74	□□□□□ -1.17
WSC4	YHL028W	CLN1	P20437	546 aa		7.74	□□□□□ -1.17
WSC4	YHL028W	PAT1	P25644	796 aa	Known RBP	7.74	□□□□□ -1.17
WSC4	YHL028W	BIO2	P32451	375 aa		7.74	□□□□□ -1.17
WSC4	YHL028W	AEP1	P32493	518 aa		7.74	□□□□□ -1.17
WSC4	YHL028W	PEP12	P32854	288 aa		7.74	□□□□□ -1.17
WSC4	YHL028W	UIP5	P36137	443 aa		7.74	□□□□□ -1.17
WSC4	YHL028W	VRP1	P37370	817 aa		7.74	□□□□□ -1.17
WSC4	YHL028W	YBL029W	P38201	376 aa		7.74	□□□□□ -1.17
WSC4	YHL028W	YBR138C	P38277	524 aa		7.74	□□□□□ -1.17
WSC4	YHL028W	YHR202W	P38887	602 aa		7.74	□□□□□ -1.17
WSC4	YHL028W	RIC1	P40395	1056 aa		7.74	□□□□□ -1.17
WSC4	YHL028W	KTR7	P40504	517 aa		7.74	□□□□□ -1.17
WSC4	YHL028W	STB2	P46679	850 aa		7.74	□□□□□ -1.17
WSC4	YHL028W	DLD2	P46681	530 aa	Known RBP	7.74	□□□□□ -1.17
WSC4	YHL028W	YJR154W	P47181	346 aa		7.74	□□□□□ -1.17
WSC4	YHL028W	PIR3	Q03180	325 aa		7.74	□□□□□ -1.17
WSC4	YHL028W	RPN4	Q03465	531 aa		7.74	□□□□□ -1.17
WSC4	YHL028W	HER2	Q03557	464 aa		7.74	□□□□□ -1.17
WSC4	YHL028W	PGC1	Q08959	321 aa		7.74	□□□□□ -1.17
WSC4	YHL028W	SVS1	Q12254	260 aa		7.74	□□□□□ -1.17
WSC4	YHL028W	SEC53	P07283	254 aa	Known RBP	7.73	□□□□□ -1.17
WSC4	YHL028W	MSS116	P15424	664 aa	Known RBP	7.73	□□□□□ -1.17
WSC4	YHL028W	YCR090C	P25654	182 aa	Known RBP	7.73	□□□□□ -1.17
WSC4	YHL028W	YCR099C	P25657	155 aa		7.73	□□□□□ -1.17
WSC4	YHL028W	PTM1	P32857	523 aa		7.73	□□□□□ -1.17
WSC4	YHL028W	KAP104	P38217	918 aa	Known RBP	7.73	□□□□□ -1.17
WSC4	YHL028W	YBR225W	P38321	900 aa		7.73	□□□□□ -1.17
WSC4	YHL028W	SLX1	P38324	304 aa		7.73	□□□□□ -1.17

Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms