RNA–Protein interactions for RNA: YGR105W

VMA21, Transcript of Integral membrane protein required for V-ATPase function, yeastyeast

Gene VMA21, Length 234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA21YGR105W YOR019WQ99248 730 aa3.34□□□□□ -1.87
VMA21YGR105W VCX1Q99385 411 aa3.34□□□□□ -1.87
VMA21YGR105W EDE1P34216 1381 aa3.34□□□□□ -1.88
VMA21YGR105W PFK2P16862 959 aaKnown RBP RIP-Chip data3.33□□□□□ -1.88not detected
VMA21YGR105W CLB2P24869 491 aa3.33□□□□□ -1.88
VMA21YGR105W PPZ1P26570 692 aa3.33□□□□□ -1.88
VMA21YGR105W XRS2P33301 854 aa3.33□□□□□ -1.88
VMA21YGR105W ESL2P36168 1195 aa3.33□□□□□ -1.88
VMA21YGR105W STV1P37296 890 aa3.33□□□□□ -1.88
VMA21YGR105W YPK3P38070 525 aa3.33□□□□□ -1.88
VMA21YGR105W RKM3P38222 552 aa3.33□□□□□ -1.88
VMA21YGR105W RTT107P38850 1070 aa3.33□□□□□ -1.88
VMA21YGR105W CCT4P39078 528 aaKnown RBP3.33□□□□□ -1.88
VMA21YGR105W BNA1P47096 177 aa3.33□□□□□ -1.88
VMA21YGR105W YMR317WQ04893 1140 aa3.33□□□□□ -1.88
VMA21YGR105W TRM8Q12009 286 aa3.33□□□□□ -1.88
VMA21YGR105W RPB8P20436 146 aa3.32□□□□□ -1.88
VMA21YGR105W TEF4P36008 412 aaKnown RBP3.32□□□□□ -1.88
VMA21YGR105W BZZ1P38822 633 aa3.32□□□□□ -1.88
VMA21YGR105W YIL060WP40519 144 aa3.32□□□□□ -1.88
VMA21YGR105W PSK2Q08217 1101 aa3.32□□□□□ -1.88
VMA21YGR105W TAH18Q12181 623 aa3.32□□□□□ -1.88
VMA21YGR105W YLR302CO13544 120 aa3.31□□□□□ -1.88
VMA21YGR105W BAR1P12630 587 aa3.31□□□□□ -1.88
VMA21YGR105W GUK1P15454 187 aaKnown RBP3.31□□□□□ -1.88
VMA21YGR105W CDC23P16522 626 aa3.31□□□□□ -1.88
VMA21YGR105W CDC15P27636 974 aa3.31□□□□□ -1.88
VMA21YGR105W SEC1P30619 724 aaKnown RBP3.31□□□□□ -1.88
VMA21YGR105W RAD24P32641 659 aa3.31□□□□□ -1.88
VMA21YGR105W UME6P39001 836 aa3.31□□□□□ -1.88
VMA21YGR105W RPN11P43588 306 aaKnown RBP3.31□□□□□ -1.88
VMA21YGR105W NNF2P53253 936 aa3.31□□□□□ -1.88
VMA21YGR105W CTL1Q03220 320 aaKnown RBP3.31□□□□□ -1.88
VMA21YGR105W YDL218WQ07629 317 aa3.31□□□□□ -1.88
VMA21YGR105W BSC1Q12140 328 aa3.31□□□□□ -1.88
VMA21YGR105W YOR111WQ99210 232 aa3.31□□□□□ -1.88
VMA21YGR105W SNF1P06782 633 aaKnown RBP3.3□□□□□ -1.88
VMA21YGR105W KRS1P15180 591 aaKnown RBP3.3□□□□□ -1.88
VMA21YGR105W CNS1P33313 385 aa3.3□□□□□ -1.88
VMA21YGR105W PTH2P34222 208 aa3.3□□□□□ -1.88
VMA21YGR105W FMP46P36141 133 aaKnown RBP3.3□□□□□ -1.88
VMA21YGR105W RIC1P40395 1056 aa3.3□□□□□ -1.88
VMA21YGR105W TPM2P40414 161 aa3.3□□□□□ -1.88
VMA21YGR105W SAP185P40856 1058 aa3.3□□□□□ -1.88
VMA21YGR105W RTS2P40962 232 aa3.3□□□□□ -1.88
VMA21YGR105W IME4P41833 600 aa3.3□□□□□ -1.88
VMA21YGR105W ATG27P46989 271 aa3.3□□□□□ -1.88
VMA21YGR105W IST1P53843 298 aaPredicted RBP3.3□□□□□ -1.88
VMA21YGR105W VID22Q05934 901 aa3.3□□□□□ -1.88
VMA21YGR105W YTH1Q06102 208 aaPredicted RBP3.3□□□□□ -1.88
VMA21YGR105W ATG9Q12142 997 aa3.3□□□□□ -1.88
VMA21YGR105W SSM4P40318 1319 aa3.29□□□□□ -1.88
VMA21YGR105W HXK2P04807 486 aaKnown RBP3.29□□□□□ -1.88
VMA21YGR105W SEC24P40482 926 aaKnown RBP3.29□□□□□ -1.88
VMA21YGR105W IAH1P41734 238 aa3.29□□□□□ -1.88
VMA21YGR105W FET5P43561 622 aa3.29□□□□□ -1.88
VMA21YGR105W VPS4P52917 437 aa3.29□□□□□ -1.88
VMA21YGR105W GTR1Q00582 310 aa3.29□□□□□ -1.88
VMA21YGR105W YDR415CQ04033 374 aaPredicted RBP3.29□□□□□ -1.88
VMA21YGR105W RSF1Q05043 376 aa3.29□□□□□ -1.88
VMA21YGR105W YLR352WQ06479 807 aa3.29□□□□□ -1.88
VMA21YGR105W NUS1Q12063 375 aa3.29□□□□□ -1.88
VMA21YGR105W TIP41Q12199 356 aa3.29□□□□□ -1.88
VMA21YGR105W YMR230W-AQ3E7B5 62 aa3.29□□□□□ -1.88
VMA21YGR105W PHO2P07269 559 aa3.28□□□□□ -1.88
VMA21YGR105W RPN2P32565 945 aaKnown RBP3.28□□□□□ -1.88
VMA21YGR105W TRS65P32893 560 aa3.28□□□□□ -1.88
VMA21YGR105W PSY4P38193 441 aa3.28□□□□□ -1.88
VMA21YGR105W ARP1P38696 384 aa3.28□□□□□ -1.88
VMA21YGR105W IES5P40060 125 aa3.28□□□□□ -1.88
VMA21YGR105W PKP1P40530 394 aa3.28□□□□□ -1.88
VMA21YGR105W PKP2P53170 491 aa3.28□□□□□ -1.88
VMA21YGR105W CUL3P53202 744 aa3.28□□□□□ -1.88
VMA21YGR105W YMR178WQ03219 274 aaKnown RBP3.28□□□□□ -1.88
VMA21YGR105W YBR085C-AO43137 85 aa3.27□□□□□ -1.89
VMA21YGR105W GID7P25569 745 aa3.27□□□□□ -1.89
VMA21YGR105W MRS6P32864 603 aaKnown RBP3.27□□□□□ -1.89
VMA21YGR105W MIA40P36046 403 aa3.27□□□□□ -1.89
VMA21YGR105W AZF1P41696 914 aa3.27□□□□□ -1.89
VMA21YGR105W DPB11P47027 764 aaPredicted RBP3.27□□□□□ -1.89
VMA21YGR105W NUP100Q02629 959 aa3.27□□□□□ -1.89
VMA21YGR105W ADE13Q05911 482 aaKnown RBP3.27□□□□□ -1.89
VMA21YGR105W ATG26Q06321 1198 aa3.27□□□□□ -1.89
VMA21YGR105W CSR2Q12734 1121 aa3.27□□□□□ -1.89
VMA21YGR105W GLN3P18494 730 aa3.26□□□□□ -1.89
VMA21YGR105W LCB1P25045 558 aaKnown RBP3.26□□□□□ -1.89
VMA21YGR105W GAC1P28006 793 aa3.26□□□□□ -1.89
VMA21YGR105W MRP20P32387 263 aa3.26□□□□□ -1.89
VMA21YGR105W SLC1P33333 303 aa3.26□□□□□ -1.89
VMA21YGR105W RIM2P38127 377 aa3.26□□□□□ -1.89
VMA21YGR105W ANS1P38832 159 aa3.26□□□□□ -1.89
VMA21YGR105W AXL2P38928 823 aa3.26□□□□□ -1.89
VMA21YGR105W YIR014WP40570 242 aa3.26□□□□□ -1.89
VMA21YGR105W SMC3P47037 1230 aa3.26□□□□□ -1.89
VMA21YGR105W STR3P53101 465 aaKnown RBP3.26□□□□□ -1.89
VMA21YGR105W ATG16Q03818 150 aa3.26□□□□□ -1.89
VMA21YGR105W SNO4Q04902 237 aa3.26□□□□□ -1.89
VMA21YGR105W HSP33Q08914 237 aaKnown RBP3.26□□□□□ -1.89
VMA21YGR105W HSP32Q08992 237 aa3.26□□□□□ -1.89
VMA21YGR105W RPB2P08518 1224 aaKnown RBP3.25□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms