RNA–Protein interactions for RNA: YGL172W

NUP49, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP49, Length 1,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP49YGL172W GND1P38720 489 aaKnown RBP6.76□□□□□ -1.33
NUP49YGL172W YHR078WP38799 552 aa6.76□□□□□ -1.33
NUP49YGL172W ALG8P40351 577 aa6.76□□□□□ -1.33
NUP49YGL172W CCT8P47079 568 aaKnown RBP6.76□□□□□ -1.33
NUP49YGL172W SLT2Q00772 484 aa6.76□□□□□ -1.33
NUP49YGL172W YDR109CQ04585 715 aa6.76□□□□□ -1.33
NUP49YGL172W RSC2Q06488 889 aa6.76□□□□□ -1.33
NUP49YGL172W RMD5Q12508 421 aa6.76□□□□□ -1.33
NUP49YGL172W GLN4P13188 809 aaKnown RBP6.76□□□□□ -1.33
NUP49YGL172W UBA1P22515 1024 aaKnown RBP6.76□□□□□ -1.33
NUP49YGL172W SEC14P24280 304 aaKnown RBP6.76□□□□□ -1.33
NUP49YGL172W YCR099CP25657 155 aa6.76□□□□□ -1.33
NUP49YGL172W MRPL9P31334 269 aa6.76□□□□□ -1.33
NUP49YGL172W GCD11P32481 527 aaKnown RBP6.76□□□□□ -1.33
NUP49YGL172W CYM1P32898 989 aa6.76□□□□□ -1.33
NUP49YGL172W TAE1P38340 232 aa6.76□□□□□ -1.33
NUP49YGL172W REV7P38927 245 aa6.76□□□□□ -1.33
NUP49YGL172W ACO2P39533 789 aa6.76□□□□□ -1.33
NUP49YGL172W GIP4P39732 760 aa6.76□□□□□ -1.33
NUP49YGL172W ARH1P48360 493 aa6.76□□□□□ -1.33
NUP49YGL172W BIO4P53630 237 aa6.76□□□□□ -1.33
NUP49YGL172W FRE4P53746 719 aa6.76□□□□□ -1.33
NUP49YGL172W ARP4P80428 489 aa6.76□□□□□ -1.33
NUP49YGL172W RNT1Q02555 471 aa6.76□□□□□ -1.33
NUP49YGL172W TFB2Q02939 513 aa6.76□□□□□ -1.33
NUP49YGL172W VPS16Q03308 798 aa6.76□□□□□ -1.33
NUP49YGL172W AGE1Q04412 482 aa6.76□□□□□ -1.33
NUP49YGL172W HPF1Q05164 967 aa6.76□□□□□ -1.33
NUP49YGL172W SYT1Q06836 1226 aa6.76□□□□□ -1.33
NUP49YGL172W OPI10Q08202 246 aa6.76□□□□□ -1.33
NUP49YGL172W ALR1Q08269 859 aa6.76□□□□□ -1.33
NUP49YGL172W HRK1Q08732 759 aaKnown RBP6.76□□□□□ -1.33
NUP49YGL172W PIN2Q12057 282 aa6.76□□□□□ -1.33
NUP49YGL172W GNT1Q12096 491 aa6.76□□□□□ -1.33
NUP49YGL172W SPS1P08458 490 aa6.75□□□□□ -1.33
NUP49YGL172W GAL11P19659 1081 aa6.75□□□□□ -1.33
NUP49YGL172W HRR25P29295 494 aaKnown RBP6.75□□□□□ -1.33
NUP49YGL172W CCR4P31384 837 aaKnown RBP6.75□□□□□ -1.33
NUP49YGL172W RML2P32611 393 aa6.75□□□□□ -1.33
NUP49YGL172W TOM20P35180 183 aa6.75□□□□□ -1.33
NUP49YGL172W TIM17P39515 158 aa6.75□□□□□ -1.33
NUP49YGL172W SSP120P39931 234 aaKnown RBP6.75□□□□□ -1.33
NUP49YGL172W RPH1P39956 796 aa6.75□□□□□ -1.33
NUP49YGL172W YJR061WP40355 935 aa6.75□□□□□ -1.33
NUP49YGL172W IRR1P40541 1150 aa6.75□□□□□ -1.33
NUP49YGL172W GTS1P40956 396 aa6.75□□□□□ -1.33
NUP49YGL172W SET2P46995 733 aaKnown RBP6.75□□□□□ -1.33
NUP49YGL172W NBP35P52920 328 aa6.75□□□□□ -1.33
NUP49YGL172W SWC4P53201 476 aa6.75□□□□□ -1.33
NUP49YGL172W YML053CQ04978 212 aa6.75□□□□□ -1.33
NUP49YGL172W CIA1Q05583 330 aa6.75□□□□□ -1.33
NUP49YGL172W ATG10Q07879 167 aa6.75□□□□□ -1.33
NUP49YGL172W VHS3Q08438 674 aa6.75□□□□□ -1.33
NUP49YGL172W YOR223WQ12015 292 aa6.75□□□□□ -1.33
NUP49YGL172W YLR053CQ12026 108 aa6.75□□□□□ -1.33
NUP49YGL172W TGL5Q12043 749 aa6.75□□□□□ -1.33
NUP49YGL172W Q0182Q9ZZW1 134 aa6.75□□□□□ -1.33
NUP49YGL172W UBR1P19812 1950 aa6.74□□□□□ -1.33
NUP49YGL172W PHO4P07270 312 aaKnown RBP6.74□□□□□ -1.33
NUP49YGL172W CLN2P20438 545 aa6.74□□□□□ -1.33
NUP49YGL172W RIM1P32445 135 aaKnown RBP6.74□□□□□ -1.33
NUP49YGL172W SPS19P32573 292 aaKnown RBP6.74□□□□□ -1.33
NUP49YGL172W VRP1P37370 817 aa6.74□□□□□ -1.33
NUP49YGL172W SRP72P38688 640 aaKnown RBP6.74□□□□□ -1.33
NUP49YGL172W PCL5P38794 229 aa6.74□□□□□ -1.33
NUP49YGL172W STN1P38960 494 aa6.74□□□□□ -1.33
NUP49YGL172W YJL206CP39529 758 aa6.74□□□□□ -1.33
NUP49YGL172W HOS4P40480 1083 aa6.74□□□□□ -1.33
NUP49YGL172W IME4P41833 600 aa6.74□□□□□ -1.33
NUP49YGL172W YJL049WP47048 450 aa6.74□□□□□ -1.33
NUP49YGL172W BUD32P53323 261 aa6.74□□□□□ -1.33
NUP49YGL172W CAF120P53836 1060 aa6.74□□□□□ -1.33
NUP49YGL172W OSH6Q02201 448 aa6.74□□□□□ -1.33
NUP49YGL172W NUS1Q12063 375 aa6.74□□□□□ -1.33
NUP49YGL172W SLP1Q12232 587 aa6.74□□□□□ -1.33
NUP49YGL172W KCS1Q12494 1050 aa6.74□□□□□ -1.33
NUP49YGL172W YMR030W-AQ3E760 96 aa6.74□□□□□ -1.33
NUP49YGL172W MSB2P32334 1306 aa6.73□□□□□ -1.33
NUP49YGL172W STE2D6VTK4 431 aa6.73□□□□□ -1.33
NUP49YGL172W SUC2P00724 532 aa6.73□□□□□ -1.33
NUP49YGL172W APA1P16550 321 aaKnown RBP6.73□□□□□ -1.33
NUP49YGL172W SRV2P17555 526 aaKnown RBP6.73□□□□□ -1.33
NUP49YGL172W SFP1P32432 683 aa6.73□□□□□ -1.33
NUP49YGL172W BEM3P32873 1128 aa6.73□□□□□ -1.33
NUP49YGL172W PRP18P33411 251 aaPredicted RBP6.73□□□□□ -1.33
NUP49YGL172W STB6P36085 766 aa6.73□□□□□ -1.33
NUP49YGL172W YSW1P38280 609 aa6.73□□□□□ -1.33
NUP49YGL172W MNN1P39106 762 aa6.73□□□□□ -1.33
NUP49YGL172W PEP8P40335 379 aa6.73□□□□□ -1.33
NUP49YGL172W COQ5P49017 307 aa6.73□□□□□ -1.33
NUP49YGL172W SNO2P53823 222 aa6.73□□□□□ -1.33
NUP49YGL172W YMR209CQ03648 457 aa6.73□□□□□ -1.33
NUP49YGL172W YDR131CQ03899 556 aa6.73□□□□□ -1.33
NUP49YGL172W SPR28Q04921 423 aa6.73□□□□□ -1.33
NUP49YGL172W HEL2Q05580 639 aaKnown RBP6.73□□□□□ -1.33
NUP49YGL172W OMS1Q06668 471 aa6.73□□□□□ -1.33
NUP49YGL172W BUD7Q08754 746 aa6.73□□□□□ -1.33
NUP49YGL172W SAM4Q08985 325 aaKnown RBP6.73□□□□□ -1.33
NUP49YGL172W RGS2Q99188 309 aa6.73□□□□□ -1.33
NUP49YGL172W SPT15P13393 240 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 60.4 ms