RNA–Protein interactions for RNA: YFR010W

UBP6, Transcript of Ubiquitin-specific protease, yeast

Gene UBP6, Length 1,500 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP6	YFR010W	VID28	P40547	921 aa		4.18	□□□□□ -1.74
UBP6	YFR010W	MSS2	P40990	351 aa		4.18	□□□□□ -1.74
UBP6	YFR010W	IAH1	P41734	238 aa		4.18	□□□□□ -1.74
UBP6	YFR010W	YDL183C	P48569	320 aa		4.18	□□□□□ -1.74
UBP6	YFR010W	NOG2	P53742	486 aa	Known RBP	4.18	□□□□□ -1.74
UBP6	YFR010W	PGA2	P53903	129 aa		4.18	□□□□□ -1.74
UBP6	YFR010W	CLU1	Q03690	1277 aa	Known RBP	4.18	□□□□□ -1.74
UBP6	YFR010W	RRP17	Q04031	235 aa	Predicted RBP	4.18	□□□□□ -1.74
UBP6	YFR010W	RIM20	Q12033	661 aa		4.18	□□□□□ -1.74
UBP6	YFR010W	LEU9	Q12166	604 aa	Known RBP	4.18	□□□□□ -1.74
UBP6	YFR010W	UBX3	Q12229	455 aa		4.18	□□□□□ -1.74
UBP6	YFR010W	MRPL23	Q12487	163 aa	Predicted RBP	4.18	□□□□□ -1.74
UBP6	YFR010W	CTF3	Q12748	733 aa		4.18	□□□□□ -1.74
UBP6	YFR010W	HXK2	P04807	486 aa	Known RBP	4.17	□□□□□ -1.74
UBP6	YFR010W	GCD2	P12754	651 aa	Predicted RBP	4.17	□□□□□ -1.74
UBP6	YFR010W	CAF20	P12962	161 aa	Known RBP	4.17	□□□□□ -1.74
UBP6	YFR010W	GLN4	P13188	809 aa	Known RBP	4.17	□□□□□ -1.74
UBP6	YFR010W	THR4	P16120	514 aa	Known RBP	4.17	□□□□□ -1.74
UBP6	YFR010W	CKA2	P19454	339 aa		4.17	□□□□□ -1.74
UBP6	YFR010W	RDS1	P25611	832 aa		4.17	□□□□□ -1.74
UBP6	YFR010W	CDC15	P27636	974 aa		4.17	□□□□□ -1.74
UBP6	YFR010W	BUD14	P27637	709 aa		4.17	□□□□□ -1.74
UBP6	YFR010W	PAP1	P29468	568 aa	Known RBP	4.17	□□□□□ -1.74
UBP6	YFR010W	CRM1	P30822	1084 aa	Known RBP	4.17	□□□□□ -1.74
UBP6	YFR010W	MRP20	P32387	263 aa		4.17	□□□□□ -1.74
UBP6	YFR010W	SUA5	P32579	426 aa		4.17	□□□□□ -1.74
UBP6	YFR010W	UBP13	P38187	747 aa		4.17	□□□□□ -1.74
UBP6	YFR010W	TMN3	P40071	706 aa		4.17	□□□□□ -1.74
UBP6	YFR010W	PFK26	P40433	827 aa	Known RBP	4.17	□□□□□ -1.74
UBP6	YFR010W	MET28	P40573	187 aa		4.17	□□□□□ -1.74
UBP6	YFR010W	MAD2	P40958	196 aa		4.17	□□□□□ -1.74
UBP6	YFR010W	HSH155	P49955	971 aa	Known RBP	4.17	□□□□□ -1.74
UBP6	YFR010W	MPP6	P53725	186 aa	Predicted RBP	4.17	□□□□□ -1.74
UBP6	YFR010W	MSC2	Q03455	724 aa		4.17	□□□□□ -1.74
UBP6	YFR010W	ARX1	Q03862	593 aa	Known RBP	4.17	□□□□□ -1.74
UBP6	YFR010W	ATC1	Q04005	294 aa		4.17	□□□□□ -1.74
UBP6	YFR010W	NNT1	Q05874	261 aa		4.17	□□□□□ -1.74
UBP6	YFR010W	ENT4	Q07872	247 aa		4.17	□□□□□ -1.74
UBP6	YFR010W	RTK1	Q12100	620 aa	Predicted RBP	4.17	□□□□□ -1.74
UBP6	YFR010W	CMC2	Q3E7A4	109 aa		4.17	□□□□□ -1.74
UBP6	YFR010W	LAG2	Q92325	660 aa		4.17	□□□□□ -1.74
UBP6	YFR010W	DIF1	O13577	133 aa		4.16	□□□□□ -1.74
UBP6	YFR010W	RPL6B	P05739	176 aa	Known RBP	4.16	□□□□□ -1.74
UBP6	YFR010W	CDC36	P06100	191 aa	Predicted RBP	4.16	□□□□□ -1.74
UBP6	YFR010W	CDC6	P09119	513 aa		4.16	□□□□□ -1.74
UBP6	YFR010W	YEL076C-A	P0CX16	216 aa		4.16	□□□□□ -1.74
UBP6	YFR010W	YLR464W	P0CX17	216 aa		4.16	□□□□□ -1.74
UBP6	YFR010W	TAL1	P15019	335 aa	Known RBP	4.16	□□□□□ -1.74
UBP6	YFR010W	RFA1	P22336	621 aa	Known RBP	4.16	□□□□□ -1.74
UBP6	YFR010W	ERG6	P25087	383 aa	Known RBP	4.16	□□□□□ -1.74
UBP6	YFR010W	MRPL37	P36532	105 aa		4.16	□□□□□ -1.74
UBP6	YFR010W	YBL029W	P38201	376 aa		4.16	□□□□□ -1.74
UBP6	YFR010W	GDT1	P38301	280 aa	Predicted RBP	4.16	□□□□□ -1.74
UBP6	YFR010W	BZZ1	P38822	633 aa		4.16	□□□□□ -1.74
UBP6	YFR010W	REV7	P38927	245 aa		4.16	□□□□□ -1.74
UBP6	YFR010W	YEL076C	P39971	216 aa		4.16	□□□□□ -1.74
UBP6	YFR010W	RTR1	P40084	226 aa	Predicted RBP	4.16	□□□□□ -1.74
UBP6	YFR010W	YER158C	P40095	573 aa		4.16	□□□□□ -1.74
UBP6	YFR010W	ASG1	P40467	964 aa		4.16	□□□□□ -1.74
UBP6	YFR010W	CAK1	P43568	368 aa	Predicted RBP	4.16	□□□□□ -1.74
UBP6	YFR010W	TOM22	P49334	152 aa		4.16	□□□□□ -1.74
UBP6	YFR010W	IMA1	P53051	589 aa		4.16	□□□□□ -1.74
UBP6	YFR010W	MTC3	P53077	123 aa		4.16	□□□□□ -1.74
UBP6	YFR010W	YGR067C	P53243	804 aa		4.16	□□□□□ -1.74
UBP6	YFR010W	YGR111W	P53265	400 aa		4.16	□□□□□ -1.74
UBP6	YFR010W	ORC4	P54791	529 aa		4.16	□□□□□ -1.74
UBP6	YFR010W	RPL6A	Q02326	176 aa	Known RBP	4.16	□□□□□ -1.74
UBP6	YFR010W	RAD30	Q04049	632 aa		4.16	□□□□□ -1.74
UBP6	YFR010W	SSL1	Q04673	461 aa	Predicted RBP	4.16	□□□□□ -1.74
UBP6	YFR010W	YLR297W	Q05899	129 aa		4.16	□□□□□ -1.74
UBP6	YFR010W	HBT1	Q07653	1046 aa	Known RBP	4.16	□□□□□ -1.74
UBP6	YFR010W	XYL2	Q07993	356 aa		4.16	□□□□□ -1.74
UBP6	YFR010W	GPA1	P08539	472 aa		4.16	□□□□□ -1.74
UBP6	YFR010W	PRP2	P20095	876 aa	Predicted RBP	4.16	□□□□□ -1.74
UBP6	YFR010W	DAL81	P21657	970 aa		4.16	□□□□□ -1.74
UBP6	YFR010W	RIT1	P23796	513 aa		4.16	□□□□□ -1.74
UBP6	YFR010W	CTS1	P29029	562 aa		4.16	□□□□□ -1.74
UBP6	YFR010W	DGR2	P32330	852 aa		4.16	□□□□□ -1.74
UBP6	YFR010W	SEF1	P34228	1148 aa		4.16	□□□□□ -1.74
UBP6	YFR010W	YKR051W	P36142	418 aa		4.16	□□□□□ -1.74
UBP6	YFR010W	CST26	P38226	397 aa		4.16	□□□□□ -1.74
UBP6	YFR010W	TSL1	P38427	1098 aa	Known RBP	4.16	□□□□□ -1.74
UBP6	YFR010W	SMF2	P38778	549 aa		4.16	□□□□□ -1.74
UBP6	YFR010W	MNN9	P39107	395 aa	Known RBP	4.16	□□□□□ -1.74
UBP6	YFR010W	RGI2	P40188	164 aa		4.16	□□□□□ -1.74
UBP6	YFR010W	RLP7	P40693	322 aa	Known RBP	4.16	□□□□□ -1.74
UBP6	YFR010W	SHR5	P41912	237 aa		4.16	□□□□□ -1.74
UBP6	YFR010W	AQR1	P53943	586 aa		4.16	□□□□□ -1.74
UBP6	YFR010W	CSI1	Q04368	295 aa		4.16	□□□□□ -1.74
UBP6	YFR010W	RCO1	Q04779	684 aa		4.16	□□□□□ -1.74
UBP6	YFR010W	HRQ1	Q05549	1077 aa		4.16	□□□□□ -1.74
UBP6	YFR010W	YLR455W	Q06188	304 aa		4.16	□□□□□ -1.74
UBP6	YFR010W	YLR173W	Q06247	608 aa		4.16	□□□□□ -1.74
UBP6	YFR010W	VAC14	Q06708	880 aa		4.16	□□□□□ -1.74
UBP6	YFR010W	GSH2	Q08220	491 aa		4.16	□□□□□ -1.74
UBP6	YFR010W	TFB5	Q3E7C1	72 aa	Predicted RBP	4.16	□□□□□ -1.74
UBP6	YFR010W	RAD61	Q99359	647 aa		4.16	□□□□□ -1.74
UBP6	YFR010W	STE2	D6VTK4	431 aa		4.15	□□□□□ -1.75
UBP6	YFR010W	YLR302C	O13544	120 aa		4.15	□□□□□ -1.75
UBP6	YFR010W	YPK2	P18961	677 aa		4.15	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 89.5 ms