RNA–Protein interactions for RNA: YER098W

UBP9, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeastyeast

Gene UBP9, Length 2,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP9YER098W SAF1P38352 637 aa5.3□□□□□ -1.56
UBP9YER098W VMA22P38784 181 aa5.3□□□□□ -1.56
UBP9YER098W PET100P38958 111 aa5.3□□□□□ -1.56
UBP9YER098W VFA1P40080 203 aa5.3□□□□□ -1.56
UBP9YER098W YJR061WP40355 935 aa5.3□□□□□ -1.56
UBP9YER098W BST1P43571 1029 aa5.3□□□□□ -1.56
UBP9YER098W YDL183CP48569 320 aa5.3□□□□□ -1.56
UBP9YER098W GCV2P49095 1034 aa5.3□□□□□ -1.56
UBP9YER098W ADE16P54113 591 aaKnown RBP5.3□□□□□ -1.56
UBP9YER098W LGE1Q02796 332 aaKnown RBP5.3□□□□□ -1.56
UBP9YER098W YMR111CQ04461 462 aaPredicted RBP5.3□□□□□ -1.56
UBP9YER098W YLH47Q06493 454 aa5.3□□□□□ -1.56
UBP9YER098W BUD7Q08754 746 aa5.3□□□□□ -1.56
UBP9YER098W NCA2Q12374 616 aa5.3□□□□□ -1.56
UBP9YER098W ZRT2Q12436 422 aa5.3□□□□□ -1.56
UBP9YER098W SNA3P14359 133 aa5.3□□□□□ -1.56
UBP9YER098W VPS1P21576 704 aaKnown RBP5.3□□□□□ -1.56
UBP9YER098W SPS22P25380 463 aa5.3□□□□□ -1.56
UBP9YER098W RPC53P25441 422 aa5.3□□□□□ -1.56
UBP9YER098W ILV6P25605 309 aaKnown RBP5.3□□□□□ -1.56
UBP9YER098W SEC21P32074 935 aaKnown RBP5.3□□□□□ -1.56
UBP9YER098W STN1P38960 494 aa5.3□□□□□ -1.56
UBP9YER098W MPT5P39016 859 aaKnown RBP RIP-Chip data5.3□□□□□ -1.56not detected
UBP9YER098W GTF1P53260 183 aaPredicted RBP5.3□□□□□ -1.56
UBP9YER098W ADY3Q07732 790 aa5.3□□□□□ -1.56
UBP9YER098W MEU1Q07938 337 aaKnown RBP RIP-Chip data5.3□□□□□ -1.56not detected
UBP9YER098W YOL075CQ08234 1294 aa5.3□□□□□ -1.56
UBP9YER098W SWM1Q12379 170 aa5.3□□□□□ -1.56
UBP9YER098W AI1P03875 834 aa5.29□□□□□ -1.56
UBP9YER098W CDC6P09119 513 aa5.29□□□□□ -1.56
UBP9YER098W THR1P17423 357 aaKnown RBP5.29□□□□□ -1.56
UBP9YER098W SRV2P17555 526 aaKnown RBP5.29□□□□□ -1.56
UBP9YER098W PRP22P24384 1145 aaKnown RBP5.29□□□□□ -1.56
UBP9YER098W DPB2P24482 689 aaPredicted RBP5.29□□□□□ -1.56
UBP9YER098W RPS7AP26786 190 aaKnown RBP5.29□□□□□ -1.56
UBP9YER098W NIP1P32497 812 aaKnown RBP5.29□□□□□ -1.56
UBP9YER098W GCG1P32656 232 aaKnown RBP5.29□□□□□ -1.56
UBP9YER098W FES1P38260 290 aa5.29□□□□□ -1.56
UBP9YER098W YBR259WP38338 688 aa5.29□□□□□ -1.56
UBP9YER098W ARB1P40024 610 aaKnown RBP5.29□□□□□ -1.56
UBP9YER098W SMX2P40204 77 aaKnown RBP5.29□□□□□ -1.56
UBP9YER098W SIP4P46954 829 aa5.29□□□□□ -1.56
UBP9YER098W FOL2P51601 243 aaKnown RBP5.29□□□□□ -1.56
UBP9YER098W COG1P53079 417 aa5.29□□□□□ -1.56
UBP9YER098W DUO1P53168 247 aaKnown RBP5.29□□□□□ -1.56
UBP9YER098W HOP2P53187 214 aa5.29□□□□□ -1.56
UBP9YER098W COS6P53344 381 aa5.29□□□□□ -1.56
UBP9YER098W TDA6Q06466 467 aa5.29□□□□□ -1.56
UBP9YER098W RPN8Q08723 338 aaKnown RBP5.29□□□□□ -1.56
UBP9YER098W RUP1Q12242 671 aa5.29□□□□□ -1.56
UBP9YER098W MET17P06106 444 aa5.28□□□□□ -1.56
UBP9YER098W CKA1P15790 372 aa5.28□□□□□ -1.56
UBP9YER098W ERG6P25087 383 aaKnown RBP5.28□□□□□ -1.56
UBP9YER098W VPH2P32341 215 aa5.28□□□□□ -1.56
UBP9YER098W GYP6P32806 458 aa5.28□□□□□ -1.56
UBP9YER098W UBC6P33296 250 aaPredicted RBP5.28□□□□□ -1.56
UBP9YER098W SRP72P38688 640 aaKnown RBP5.28□□□□□ -1.56
UBP9YER098W CRG1P38892 291 aaRIP-Chip data5.28□□□□□ -1.56not detected
UBP9YER098W STB2P46679 850 aa5.28□□□□□ -1.56
UBP9YER098W NOP9P47077 666 aaKnown RBP5.28□□□□□ -1.56
UBP9YER098W CUE3P53137 624 aaKnown RBP5.28□□□□□ -1.56
UBP9YER098W YGR250CP53316 781 aaKnown RBP5.28□□□□□ -1.56
UBP9YER098W YNL040WP53960 456 aaPredicted RBP5.28□□□□□ -1.56
UBP9YER098W ATG21Q02887 496 aa5.28□□□□□ -1.56
UBP9YER098W FCP1Q03254 732 aa5.28□□□□□ -1.56
UBP9YER098W TRS31Q03337 283 aa5.28□□□□□ -1.56
UBP9YER098W COA4Q05809 96 aa5.28□□□□□ -1.56
UBP9YER098W CFT2Q12102 859 aaPredicted RBP5.28□□□□□ -1.56
UBP9YER098W YLR302CO13544 120 aa5.28□□□□□ -1.56
UBP9YER098W GCD1P09032 578 aaPredicted RBP5.28□□□□□ -1.56
UBP9YER098W VPH1P32563 840 aaKnown RBP5.28□□□□□ -1.56
UBP9YER098W DBP7P36120 742 aaKnown RBP5.28□□□□□ -1.56
UBP9YER098W EHT1P38295 451 aa5.28□□□□□ -1.56
UBP9YER098W STB5P38699 743 aa5.28□□□□□ -1.56
UBP9YER098W SFB3P38810 929 aa5.28□□□□□ -1.56
UBP9YER098W PEX18P38855 283 aa5.28□□□□□ -1.56
UBP9YER098W FTR1P40088 404 aa5.28□□□□□ -1.56
UBP9YER098W RPM2Q02773 1202 aa5.28□□□□□ -1.56
UBP9YER098W DIG1Q03063 452 aaKnown RBP5.28□□□□□ -1.56
UBP9YER098W YML108WQ03759 105 aa5.28□□□□□ -1.56
UBP9YER098W ADY4Q05955 493 aa5.28□□□□□ -1.56
UBP9YER098W HTZ1Q12692 134 aaKnown RBP5.28□□□□□ -1.56
UBP9YER098W YOR111WQ99210 232 aa5.28□□□□□ -1.56
UBP9YER098W SSK22P25390 1331 aaPredicted RBP5.27□□□□□ -1.57
UBP9YER098W ARG3P05150 338 aa5.27□□□□□ -1.57
UBP9YER098W RPB2P08518 1224 aaKnown RBP5.27□□□□□ -1.57
UBP9YER098W MSS116P15424 664 aaKnown RBP5.27□□□□□ -1.57
UBP9YER098W KIN82P25341 720 aa5.27□□□□□ -1.57
UBP9YER098W CTF13P35203 478 aa5.27□□□□□ -1.57
UBP9YER098W YEL025CP39991 1188 aa5.27□□□□□ -1.57
UBP9YER098W FMP10P40098 244 aa5.27□□□□□ -1.57
UBP9YER098W AIP1P46680 615 aaKnown RBP5.27□□□□□ -1.57
UBP9YER098W YGR016WP53209 190 aa5.27□□□□□ -1.57
UBP9YER098W YSA1Q01976 231 aa5.27□□□□□ -1.57
UBP9YER098W YMR155WQ03795 547 aa5.27□□□□□ -1.57
UBP9YER098W YDR179W-AQ03983 463 aa5.27□□□□□ -1.57
UBP9YER098W IRC3Q06683 689 aa5.27□□□□□ -1.57
UBP9YER098W LPX1Q12405 387 aaKnown RBP5.27□□□□□ -1.57
UBP9YER098W GCN4P03069 281 aa5.27□□□□□ -1.57
UBP9YER098W RPL22AP05749 121 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms