RNA–Protein interactions for RNA: YER094C

PUP3, Transcript of Beta 3 subunit of the 20S proteasome, yeastyeast

Gene PUP3, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP3YER094C YMR155WQ03795 547 aa7.8□□□□□ -1.16
PUP3YER094C TVP15Q03860 143 aa7.8□□□□□ -1.16
PUP3YER094C VTA1Q06263 330 aa7.8□□□□□ -1.16
PUP3YER094C RHO2P06781 192 aa7.79□□□□□ -1.16
PUP3YER094C MPH2P0CD99 609 aa7.79□□□□□ -1.16
PUP3YER094C NMT1P14743 455 aa7.79□□□□□ -1.16
PUP3YER094C HSC82P15108 705 aaKnown RBP7.79□□□□□ -1.16
PUP3YER094C SEC15P22224 910 aa7.79□□□□□ -1.16
PUP3YER094C PTH2P34222 208 aa7.79□□□□□ -1.16
PUP3YER094C IRS4P36115 615 aaKnown RBP7.79□□□□□ -1.16
PUP3YER094C EFM1P38732 585 aa7.79□□□□□ -1.16
PUP3YER094C ERP5P38819 212 aa7.79□□□□□ -1.16
PUP3YER094C UTP9P38882 575 aaKnown RBP7.79□□□□□ -1.16
PUP3YER094C OSW5P40219 148 aa7.79□□□□□ -1.16
PUP3YER094C SER33P40510 469 aa7.79□□□□□ -1.16
PUP3YER094C RPL34BP40525 121 aaKnown RBP7.79□□□□□ -1.16
PUP3YER094C PRM2P40534 656 aa7.79□□□□□ -1.16
PUP3YER094C IRR1P40541 1150 aa7.79□□□□□ -1.16
PUP3YER094C YIR007WP40566 764 aa7.79□□□□□ -1.16
PUP3YER094C GTS1P40956 396 aa7.79□□□□□ -1.16
PUP3YER094C GLG2P47011 380 aa7.79□□□□□ -1.16
PUP3YER094C PET130P47065 347 aa7.79□□□□□ -1.16
PUP3YER094C TAF12Q03761 539 aa7.79□□□□□ -1.16
PUP3YER094C YDR131CQ03899 556 aa7.79□□□□□ -1.16
PUP3YER094C CIA1Q05583 330 aa7.79□□□□□ -1.16
PUP3YER094C TMA46Q12000 345 aaKnown RBP7.79□□□□□ -1.16
PUP3YER094C RAD59Q12223 238 aa7.79□□□□□ -1.16
PUP3YER094C NOT5Q12514 560 aaPredicted RBP7.79□□□□□ -1.16
PUP3YER094C MPD2Q99316 277 aa7.79□□□□□ -1.16
PUP3YER094C YOR338WQ99326 363 aa7.79□□□□□ -1.16
PUP3YER094C CET1O13297 549 aaPredicted RBP7.78□□□□□ -1.16
PUP3YER094C UBA1P22515 1024 aaKnown RBP7.78□□□□□ -1.16
PUP3YER094C PHO3P24031 467 aa7.78□□□□□ -1.16
PUP3YER094C NPP1P25353 742 aa7.78□□□□□ -1.16
PUP3YER094C YCR090CP25654 182 aaKnown RBP7.78□□□□□ -1.16
PUP3YER094C BRF1P29056 596 aa7.78□□□□□ -1.16
PUP3YER094C MRPL9P31334 269 aa7.78□□□□□ -1.16
PUP3YER094C PRP18P33411 251 aaPredicted RBP7.78□□□□□ -1.16
PUP3YER094C PHO11P35842 467 aa7.78□□□□□ -1.16
PUP3YER094C PHO12P38693 467 aa7.78□□□□□ -1.16
PUP3YER094C MUP3P38734 546 aa7.78□□□□□ -1.16
PUP3YER094C STN1P38960 494 aa7.78□□□□□ -1.16
PUP3YER094C MRM2P53123 320 aa7.78□□□□□ -1.16
PUP3YER094C COG7P53195 279 aa7.78□□□□□ -1.16
PUP3YER094C NMA2P53204 395 aa7.78□□□□□ -1.16
PUP3YER094C PEX13P80667 386 aa7.78□□□□□ -1.16
PUP3YER094C RMI1Q02685 241 aa7.78□□□□□ -1.16
PUP3YER094C BLS1Q06071 122 aa7.78□□□□□ -1.16
PUP3YER094C NSE1Q07913 336 aa7.78□□□□□ -1.16
PUP3YER094C ALR1Q08269 859 aa7.78□□□□□ -1.16
PUP3YER094C YPL225WQ08971 146 aaKnown RBP7.78□□□□□ -1.16
PUP3YER094C MRH1Q12117 320 aaPredicted RBP7.78□□□□□ -1.16
PUP3YER094C ICT1Q12385 394 aa7.78□□□□□ -1.16
PUP3YER094C RPS9AO13516 197 aaKnown RBP7.77□□□□□ -1.17
PUP3YER094C SEM1O94742 89 aa7.77□□□□□ -1.17
PUP3YER094C HEM2P05373 342 aa7.77□□□□□ -1.17
PUP3YER094C RAD3P06839 778 aa7.77□□□□□ -1.17
PUP3YER094C ARG1P22768 420 aa7.77□□□□□ -1.17
PUP3YER094C GUT1P32190 709 aa7.77□□□□□ -1.17
PUP3YER094C SFP1P32432 683 aa7.77□□□□□ -1.17
PUP3YER094C PTM1P32857 523 aa7.77□□□□□ -1.17
PUP3YER094C RFC3P38629 340 aa7.77□□□□□ -1.17
PUP3YER094C SEC31P38968 1273 aaKnown RBP7.77□□□□□ -1.17
PUP3YER094C RPH1P39956 796 aa7.77□□□□□ -1.17
PUP3YER094C VMA13P41807 478 aaKnown RBP7.77□□□□□ -1.17
PUP3YER094C YRB1P41920 201 aaKnown RBP7.77□□□□□ -1.17
PUP3YER094C GCD14P46959 383 aaPredicted RBP7.77□□□□□ -1.17
PUP3YER094C ATH1P48016 1211 aa7.77□□□□□ -1.17
PUP3YER094C CLD1P53264 445 aa7.77□□□□□ -1.17
PUP3YER094C FRE4P53746 719 aa7.77□□□□□ -1.17
PUP3YER094C LSM3P57743 89 aaKnown RBP7.77□□□□□ -1.17
PUP3YER094C MAP1Q01662 387 aaKnown RBP RIP-Chip data7.77□□□□□ -1.17not detected
PUP3YER094C GOT1Q03554 138 aa7.77□□□□□ -1.17
PUP3YER094C SPO20Q04359 397 aa7.77□□□□□ -1.17
PUP3YER094C ENT4Q07872 247 aa7.77□□□□□ -1.17
PUP3YER094C IRC10Q08118 586 aa7.77□□□□□ -1.17
PUP3YER094C BUD7Q08754 746 aa7.77□□□□□ -1.17
PUP3YER094C YMR084WA2P2R3 262 aa7.76□□□□□ -1.17
PUP3YER094C RNA1P11745 407 aaKnown RBP7.76□□□□□ -1.17
PUP3YER094C APA1P16550 321 aaKnown RBP7.76□□□□□ -1.17
PUP3YER094C FPR1P20081 114 aaKnown RBP7.76□□□□□ -1.17
PUP3YER094C MVD1P32377 396 aaKnown RBP7.76□□□□□ -1.17
PUP3YER094C SPS19P32573 292 aaKnown RBP7.76□□□□□ -1.17
PUP3YER094C TFC3P34111 1160 aa7.76□□□□□ -1.17
PUP3YER094C SKT5P34226 696 aa7.76□□□□□ -1.17
PUP3YER094C EAP1P36041 632 aaKnown RBP7.76□□□□□ -1.17
PUP3YER094C PCL5P38794 229 aa7.76□□□□□ -1.17
PUP3YER094C BZZ1P38822 633 aa7.76□□□□□ -1.17
PUP3YER094C GDH3P39708 457 aa7.76□□□□□ -1.17
PUP3YER094C TMA22P47089 198 aaPredicted RBP7.76□□□□□ -1.17
PUP3YER094C EFM5P53200 248 aaKnown RBP7.76□□□□□ -1.17
PUP3YER094C SWC4P53201 476 aa7.76□□□□□ -1.17
PUP3YER094C YNR061CP53747 219 aa7.76□□□□□ -1.17
PUP3YER094C IBD2P53892 351 aa7.76□□□□□ -1.17
PUP3YER094C GTR1Q00582 310 aa7.76□□□□□ -1.17
PUP3YER094C UPC2Q12151 913 aa7.76□□□□□ -1.17
PUP3YER094C RIB2Q12362 591 aaKnown RBP7.76□□□□□ -1.17
PUP3YER094C YPL247CQ12523 523 aa7.76□□□□□ -1.17
PUP3YER094C ART10P18634 518 aaKnown RBP7.75□□□□□ -1.17
PUP3YER094C EXO70P19658 623 aa7.75□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms