RNA–Protein interactions for RNA: YDR452W

PPN1, Transcript of Vacuolar endopolyphosphatase with a role in phosphate metabolism, yeast

Gene PPN1, Length 2,025 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PPN1	YDR452W	COG1	P53079	417 aa		2.78	□□□□□ -1.96
PPN1	YDR452W	YDL218W	Q07629	317 aa		2.78	□□□□□ -1.96
PPN1	YDR452W	TMA16	Q08687	178 aa		2.78	□□□□□ -1.96
PPN1	YDR452W	GLN3	P18494	730 aa		2.78	□□□□□ -1.96
PPN1	YDR452W	YCL049C	P25577	312 aa		2.78	□□□□□ -1.96
PPN1	YDR452W	YIR014W	P40570	242 aa		2.78	□□□□□ -1.96
PPN1	YDR452W	AZF1	P41696	914 aa		2.78	□□□□□ -1.96
PPN1	YDR452W	IAH1	P41734	238 aa		2.78	□□□□□ -1.96
PPN1	YDR452W	PKP2	P53170	491 aa		2.78	□□□□□ -1.96
PPN1	YDR452W	TFC6	Q06339	672 aa		2.78	□□□□□ -1.96
PPN1	YDR452W	CSR2	Q12734	1121 aa		2.78	□□□□□ -1.96
PPN1	YDR452W	GUK1	P15454	187 aa	Known RBP	2.77	□□□□□ -1.97
PPN1	YDR452W	PDA1	P16387	420 aa	Known RBP	2.77	□□□□□ -1.97
PPN1	YDR452W	SRB5	P32585	307 aa		2.77	□□□□□ -1.97
PPN1	YDR452W	TRS65	P32893	560 aa		2.77	□□□□□ -1.97
PPN1	YDR452W	IMP4	P53941	290 aa	Known RBP	2.77	□□□□□ -1.97
PPN1	YDR452W	YDR415C	Q04033	374 aa	Predicted RBP	2.77	□□□□□ -1.97
PPN1	YDR452W	YOL057W	Q08225	711 aa		2.77	□□□□□ -1.97
PPN1	YDR452W	YBR298C-A	Q8TGK4	73 aa		2.77	□□□□□ -1.97
PPN1	YDR452W	ATP4	P05626	244 aa		2.76	□□□□□ -1.97
PPN1	YDR452W	PGI1	P12709	554 aa	Known RBP	2.76	□□□□□ -1.97
PPN1	YDR452W	PRP16	P15938	1071 aa	Predicted RBP	2.76	□□□□□ -1.97
PPN1	YDR452W	NUP120	P35729	1037 aa		2.76	□□□□□ -1.97
PPN1	YDR452W	STV1	P37296	890 aa		2.76	□□□□□ -1.97
PPN1	YDR452W	IFA38	P38286	347 aa		2.76	□□□□□ -1.97
PPN1	YDR452W	SDS24	P38314	527 aa		2.76	□□□□□ -1.97
PPN1	YDR452W	NUP100	Q02629	959 aa		2.76	□□□□□ -1.97
PPN1	YDR452W	MRS3	P10566	314 aa		2.76	□□□□□ -1.97
PPN1	YDR452W	GID7	P25569	745 aa		2.76	□□□□□ -1.97
PPN1	YDR452W	RPN11	P43588	306 aa	Known RBP	2.76	□□□□□ -1.97
PPN1	YDR452W	GUF1	P46943	645 aa		2.76	□□□□□ -1.97
PPN1	YDR452W	ASE1	P50275	885 aa		2.76	□□□□□ -1.97
PPN1	YDR452W	YEF3	P16521	1044 aa	Known RBP	2.75	□□□□□ -1.97
PPN1	YDR452W	RPB8	P20436	146 aa		2.75	□□□□□ -1.97
PPN1	YDR452W	PHO90	P39535	881 aa		2.75	□□□□□ -1.97
PPN1	YDR452W	YER130C	P39959	443 aa		2.75	□□□□□ -1.97
PPN1	YDR452W	RRT6	P53117	311 aa	Predicted RBP	2.75	□□□□□ -1.97
PPN1	YDR452W	ADE13	Q05911	482 aa	Known RBP	2.75	□□□□□ -1.97
PPN1	YDR452W	ATG9	Q12142	997 aa		2.75	□□□□□ -1.97
PPN1	YDR452W	VCX1	Q99385	411 aa		2.75	□□□□□ -1.97
PPN1	YDR452W	KRS1	P15180	591 aa	Known RBP	2.75	□□□□□ -1.97
PPN1	YDR452W	NOP1	P15646	327 aa	Known RBP	2.75	□□□□□ -1.97
PPN1	YDR452W	NPR3	P38742	1146 aa		2.75	□□□□□ -1.97
PPN1	YDR452W	PSD1	P39006	500 aa		2.75	□□□□□ -1.97
PPN1	YDR452W	ACA1	P39970	489 aa		2.75	□□□□□ -1.97
PPN1	YDR452W	PSF2	P40359	213 aa		2.75	□□□□□ -1.97
PPN1	YDR452W	CTF18	P49956	741 aa		2.75	□□□□□ -1.97
PPN1	YDR452W	FCP1	Q03254	732 aa		2.75	□□□□□ -1.97
PPN1	YDR452W	TMA64	Q04600	565 aa	Known RBP	2.75	□□□□□ -1.97
PPN1	YDR452W	TPK1	P06244	397 aa		2.74	□□□□□ -1.97
PPN1	YDR452W	MTF2	P10849	440 aa		2.74	□□□□□ -1.97
PPN1	YDR452W	ESL2	P36168	1195 aa		2.74	□□□□□ -1.97
PPN1	YDR452W	PHO81	P17442	1178 aa		2.73	□□□□□ -1.97
PPN1	YDR452W	MSM1	P22438	575 aa		2.73	□□□□□ -1.97
PPN1	YDR452W	GAC1	P28006	793 aa		2.73	□□□□□ -1.97
PPN1	YDR452W	MIA40	P36046	403 aa		2.73	□□□□□ -1.97
PPN1	YDR452W	YBR139W	P38109	508 aa		2.73	□□□□□ -1.97
PPN1	YDR452W	ERG7	P38604	731 aa		2.73	□□□□□ -1.97
PPN1	YDR452W	RTS1	P38903	757 aa		2.73	□□□□□ -1.97
PPN1	YDR452W	REG1	Q00816	1014 aa		2.73	□□□□□ -1.97
PPN1	YDR452W	NYV1	Q12255	253 aa		2.73	□□□□□ -1.97
PPN1	YDR452W	YOR019W	Q99248	730 aa		2.73	□□□□□ -1.97
PPN1	YDR452W	UBC1	P21734	215 aa	Known RBP	2.73	□□□□□ -1.97
PPN1	YDR452W	ERG1	P32476	496 aa	Known RBP	2.73	□□□□□ -1.97
PPN1	YDR452W	LOS1	P33418	1100 aa	Predicted RBP	2.73	□□□□□ -1.97
PPN1	YDR452W	TFC3	P34111	1160 aa		2.73	□□□□□ -1.97
PPN1	YDR452W	SPC34	P36131	295 aa		2.73	□□□□□ -1.97
PPN1	YDR452W	YHR218W	P38899	603 aa		2.73	□□□□□ -1.97
PPN1	YDR452W	YMR178W	Q03219	274 aa	Known RBP	2.73	□□□□□ -1.97
PPN1	YDR452W	TLG2	Q08144	397 aa		2.73	□□□□□ -1.97
PPN1	YDR452W	NUC1	P08466	329 aa		2.72	□□□□□ -1.97
PPN1	YDR452W	ERG8	P24521	451 aa		2.72	□□□□□ -1.97
PPN1	YDR452W	PFK26	P40433	827 aa	Known RBP	2.72	□□□□□ -1.97
PPN1	YDR452W	FAF1	P40546	346 aa	Predicted RBP	2.72	□□□□□ -1.97
PPN1	YDR452W	ATG26	Q06321	1198 aa		2.72	□□□□□ -1.97
PPN1	YDR452W	PSK2	Q08217	1101 aa		2.72	□□□□□ -1.97
PPN1	YDR452W	PGS1	P25578	521 aa		2.71	□□□□□ -1.98
PPN1	YDR452W	RGI2	P40188	164 aa		2.71	□□□□□ -1.98
PPN1	YDR452W	PKP1	P40530	394 aa		2.71	□□□□□ -1.98
PPN1	YDR452W	NNF2	P53253	936 aa		2.71	□□□□□ -1.98
PPN1	YDR452W	MRPL13	Q02204	264 aa		2.71	□□□□□ -1.98
PPN1	YDR452W	ATS1	P31386	333 aa		2.71	□□□□□ -1.98
PPN1	YDR452W	PRO3	P32263	286 aa	Known RBP	2.71	□□□□□ -1.98
PPN1	YDR452W	ROK1	P45818	564 aa	Predicted RBP	2.71	□□□□□ -1.98
PPN1	YDR452W	SOL4	P53315	255 aa		2.71	□□□□□ -1.98
PPN1	YDR452W	CSR1	Q06705	408 aa	Known RBP	2.71	□□□□□ -1.98
PPN1	YDR452W	CPR3	P25719	182 aa		2.7	□□□□□ -1.98
PPN1	YDR452W	PHD1	P36093	366 aa		2.7	□□□□□ -1.98
PPN1	YDR452W	MRPL36	P36531	177 aa		2.7	□□□□□ -1.98
PPN1	YDR452W	SEC24	P40482	926 aa	Known RBP	2.7	□□□□□ -1.98
PPN1	YDR452W	BNA1	P47096	177 aa		2.7	□□□□□ -1.98
PPN1	YDR452W	RBA50	Q04418	439 aa		2.7	□□□□□ -1.98
PPN1	YDR452W	RSA1	Q08932	381 aa		2.7	□□□□□ -1.98
PPN1	YDR452W	IST3	P40565	148 aa	Predicted RBP	2.69	□□□□□ -1.98
PPN1	YDR452W	DIM1	P41819	318 aa	Known RBP	2.69	□□□□□ -1.98
PPN1	YDR452W	IST1	P53843	298 aa	Predicted RBP	2.69	□□□□□ -1.98
PPN1	YDR452W	ZDS2	P54786	942 aa		2.69	□□□□□ -1.98
PPN1	YDR452W	FMP45	Q07651	309 aa		2.69	□□□□□ -1.98
PPN1	YDR452W	RPS2	P25443	254 aa	Known RBP	2.69	□□□□□ -1.98
PPN1	YDR452W	MCM4	P30665	933 aa	Known RBP	2.69	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 23 ms