RNA–Protein interactions for RNA: YDR378C

LSM6, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM6, Length 261 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM6	YDR378C	DUO1	P53168	247 aa	Known RBP	5.21	□□□□□ -1.58
LSM6	YDR378C	NNF2	P53253	936 aa		5.21	□□□□□ -1.58
LSM6	YDR378C	YNL144C	P53907	740 aa		5.21	□□□□□ -1.58
LSM6	YDR378C	YKU80	Q04437	629 aa		5.21	□□□□□ -1.58
LSM6	YDR378C	SWF1	Q04629	336 aa		5.21	□□□□□ -1.58
LSM6	YDR378C	ECM22	Q05958	814 aa	Predicted RBP	5.21	□□□□□ -1.58
LSM6	YDR378C	COG4	Q06096	861 aa		5.21	□□□□□ -1.58
LSM6	YDR378C	SEC53	P07283	254 aa	Known RBP	5.2	□□□□□ -1.58
LSM6	YDR378C	TKL1	P23254	680 aa	Known RBP	5.2	□□□□□ -1.58
LSM6	YDR378C	CNA1	P23287	553 aa		5.2	□□□□□ -1.58
LSM6	YDR378C	YCK1	P23291	538 aa		5.2	□□□□□ -1.58
LSM6	YDR378C	SAC6	P32599	642 aa	Known RBP	5.2	□□□□□ -1.58
LSM6	YDR378C	YIL024C	P40543	189 aa		5.2	□□□□□ -1.58
LSM6	YDR378C	NET1	P47035	1189 aa		5.2	□□□□□ -1.58
LSM6	YDR378C	UPF3	P48412	387 aa	Known RBP	5.2	□□□□□ -1.58
LSM6	YDR378C	YML122C	Q03207	126 aa		5.2	□□□□□ -1.58
LSM6	YDR378C	CHO1	P08456	276 aa		5.19	□□□□□ -1.58
LSM6	YDR378C	MDM10	P18409	493 aa		5.19	□□□□□ -1.58
LSM6	YDR378C	SAC1	P32368	623 aa	Known RBP	5.19	□□□□□ -1.58
LSM6	YDR378C	YKL050C	P35736	922 aa		5.19	□□□□□ -1.58
LSM6	YDR378C	AUR1	P36107	401 aa	Predicted RBP	5.19	□□□□□ -1.58
LSM6	YDR378C	PXL1	P36166	706 aa		5.19	□□□□□ -1.58
LSM6	YDR378C	SCO2	P38072	301 aa		5.19	□□□□□ -1.58
LSM6	YDR378C	DIA4	P38705	446 aa	Predicted RBP	5.19	□□□□□ -1.58
LSM6	YDR378C	UIP3	P39547	235 aa		5.19	□□□□□ -1.58
LSM6	YDR378C	ERP2	P39704	215 aa		5.19	□□□□□ -1.58
LSM6	YDR378C	FRE3	Q08905	711 aa		5.19	□□□□□ -1.58
LSM6	YDR378C	APL4	Q12028	832 aa		5.19	□□□□□ -1.58
LSM6	YDR378C	INP53	Q12271	1107 aa		5.19	□□□□□ -1.58
LSM6	YDR378C	MED1	Q12321	566 aa		5.19	□□□□□ -1.58
LSM6	YDR378C	NOP58	Q12499	511 aa	Known RBP	5.19	□□□□□ -1.58
LSM6	YDR378C	GAL4	P04386	881 aa		5.18	□□□□□ -1.58
LSM6	YDR378C	HSC82	P15108	705 aa	Known RBP	5.18	□□□□□ -1.58
LSM6	YDR378C	FLO5	P38894	1075 aa		5.18	□□□□□ -1.58
LSM6	YDR378C	RPS7B	P48164	190 aa	Known RBP	5.18	□□□□□ -1.58
LSM6	YDR378C	VTC3	Q02725	835 aa		5.18	□□□□□ -1.58
LSM6	YDR378C	PWP1	P21304	576 aa	Known RBP	5.17	□□□□□ -1.58
LSM6	YDR378C	STE50	P25344	346 aa		5.17	□□□□□ -1.58
LSM6	YDR378C	ADH7	P25377	361 aa		5.17	□□□□□ -1.58
LSM6	YDR378C	TOM71	P38825	639 aa	Known RBP	5.17	□□□□□ -1.58
LSM6	YDR378C	VPS25	P47142	202 aa		5.17	□□□□□ -1.58
LSM6	YDR378C	DIA3	P52290	468 aa		5.17	□□□□□ -1.58
LSM6	YDR378C	ZDS2	P54786	942 aa		5.17	□□□□□ -1.58
LSM6	YDR378C	STP1	Q00947	519 aa		5.17	□□□□□ -1.58
LSM6	YDR378C	YMR178W	Q03219	274 aa	Known RBP	5.17	□□□□□ -1.58
LSM6	YDR378C	ATG9	Q12142	997 aa		5.17	□□□□□ -1.58
LSM6	YDR378C	KRS1	P15180	591 aa	Known RBP	5.16	□□□□□ -1.58
LSM6	YDR378C	LCB1	P25045	558 aa	Known RBP	5.16	□□□□□ -1.58
LSM6	YDR378C	SNU114	P36048	1008 aa	Known RBP	5.16	□□□□□ -1.58
LSM6	YDR378C	VPS41	P38959	992 aa		5.16	□□□□□ -1.58
LSM6	YDR378C	FLC2	P39719	783 aa		5.16	□□□□□ -1.58
LSM6	YDR378C	AFG3	P39925	761 aa		5.16	□□□□□ -1.58
LSM6	YDR378C	LYS4	P49367	693 aa	Predicted RBP	5.16	□□□□□ -1.58
LSM6	YDR378C	STR3	P53101	465 aa	Known RBP	5.16	□□□□□ -1.58
LSM6	YDR378C	EAF7	P53911	425 aa	Known RBP	5.16	□□□□□ -1.58
LSM6	YDR378C	BUD22	Q04347	519 aa	Known RBP	5.16	□□□□□ -1.58
LSM6	YDR378C	ARP9	Q05123	467 aa		5.16	□□□□□ -1.58
LSM6	YDR378C	NMD4	Q12129	218 aa		5.16	□□□□□ -1.58
LSM6	YDR378C	POL4	P25615	582 aa		5.15	□□□□□ -1.59
LSM6	YDR378C	YPT53	P36019	220 aa		5.15	□□□□□ -1.59
LSM6	YDR378C	YPT11	P48559	417 aa		5.15	□□□□□ -1.59
LSM6	YDR378C	ASI1	P54074	624 aa		5.15	□□□□□ -1.59
LSM6	YDR378C	YML037C	Q03703	340 aa		5.15	□□□□□ -1.59
LSM6	YDR378C	TSR2	Q06672	205 aa	Known RBP	5.15	□□□□□ -1.59
LSM6	YDR378C	POS5	Q06892	414 aa		5.15	□□□□□ -1.59
LSM6	YDR378C	RCN2	Q12044	265 aa		5.15	□□□□□ -1.59
LSM6	YDR378C	YPR089W	O13585	888 aa		5.14	□□□□□ -1.59
LSM6	YDR378C	SGF29	P25554	259 aa		5.14	□□□□□ -1.59
LSM6	YDR378C	YIH1	P25637	258 aa		5.14	□□□□□ -1.59
LSM6	YDR378C	PEP3	P27801	918 aa		5.14	□□□□□ -1.59
LSM6	YDR378C	VRG4	P40107	337 aa		5.14	□□□□□ -1.59
LSM6	YDR378C	MRPL1	Q04599	285 aa		5.14	□□□□□ -1.59
LSM6	YDR378C	IMH1	Q06704	911 aa	Known RBP	5.14	□□□□□ -1.59
LSM6	YDR378C	ATX2	Q12067	313 aa		5.14	□□□□□ -1.59
LSM6	YDR378C	LEU9	Q12166	604 aa	Known RBP	5.14	□□□□□ -1.59
LSM6	YDR378C	INH1	P01097	85 aa		5.13	□□□□□ -1.59
LSM6	YDR378C	KAR3	P17119	729 aa		5.13	□□□□□ -1.59
LSM6	YDR378C	CLB2	P24869	491 aa		5.13	□□□□□ -1.59
LSM6	YDR378C	CMK1	P27466	446 aa	Known RBP	5.13	□□□□□ -1.59
LSM6	YDR378C	YMR124W	P39523	943 aa	Known RBP	5.13	□□□□□ -1.59
LSM6	YDR378C	IRC8	P47046	822 aa		5.13	□□□□□ -1.59
LSM6	YDR378C	DSD1	P53095	428 aa		5.13	□□□□□ -1.59
LSM6	YDR378C	RBG2	P53295	368 aa	Known RBP	5.13	□□□□□ -1.59
LSM6	YDR378C	YTP1	P53584	459 aa		5.13	□□□□□ -1.59
LSM6	YDR378C	NGL3	Q03210	505 aa		5.13	□□□□□ -1.59
LSM6	YDR378C	CTI6	Q08923	506 aa		5.13	□□□□□ -1.59
LSM6	YDR378C	RTP1	Q12751	981 aa		5.13	□□□□□ -1.59
LSM6	YDR378C	GCN4	P03069	281 aa		5.12	□□□□□ -1.59
LSM6	YDR378C	ARD1	P07347	238 aa	Predicted RBP	5.12	□□□□□ -1.59
LSM6	YDR378C	MRP7	P12687	371 aa		5.12	□□□□□ -1.59
LSM6	YDR378C	RPB8	P20436	146 aa		5.12	□□□□□ -1.59
LSM6	YDR378C	OLE1	P21147	510 aa	Known RBP	5.12	□□□□□ -1.59
LSM6	YDR378C	STV1	P37296	890 aa		5.12	□□□□□ -1.59
LSM6	YDR378C	MNN2	P38069	597 aa		5.12	□□□□□ -1.59
LSM6	YDR378C	RFC1	P38630	861 aa	Known RBP	5.12	□□□□□ -1.59
LSM6	YDR378C	ELO1	P39540	310 aa		5.12	□□□□□ -1.59
LSM6	YDR378C	NDE1	P40215	560 aa		5.12	□□□□□ -1.59
LSM6	YDR378C	PTR3	P43606	678 aa		5.12	□□□□□ -1.59
LSM6	YDR378C	GLO1	P50107	326 aa		5.12	□□□□□ -1.59
LSM6	YDR378C	LCL3	P53153	274 aa		5.12	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms