RNA–Protein interactions for RNA: YDR254W

CHL4, Transcript of Outer kinetochore protein required for chromosome stability, yeast

Gene CHL4, Length 1,377 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CHL4	YDR254W	MUK1	Q02866	612 aa		5.97	□□□□□ -1.45
CHL4	YDR254W	RSM28	Q03430	361 aa		5.97	□□□□□ -1.45
CHL4	YDR254W	CSI1	Q04368	295 aa		5.97	□□□□□ -1.45
CHL4	YDR254W	YLR297W	Q05899	129 aa		5.97	□□□□□ -1.45
CHL4	YDR254W	ENT4	Q07872	247 aa		5.97	□□□□□ -1.45
CHL4	YDR254W	YPL277C	Q08989	487 aa		5.97	□□□□□ -1.45
CHL4	YDR254W	ISN1	Q99312	450 aa		5.97	□□□□□ -1.45
CHL4	YDR254W	YLR302C	O13544	120 aa		5.96	□□□□□ -1.45
CHL4	YDR254W	CBP2	P03874	630 aa	Predicted RBP	5.96	□□□□□ -1.45
CHL4	YDR254W	HXK2	P04807	486 aa	Known RBP	5.96	□□□□□ -1.45
CHL4	YDR254W	TAL1	P15019	335 aa	Known RBP	5.96	□□□□□ -1.45
CHL4	YDR254W	OSM1	P21375	501 aa	Known RBP	5.96	□□□□□ -1.45
CHL4	YDR254W	DAL81	P21657	970 aa		5.96	□□□□□ -1.45
CHL4	YDR254W	ERG6	P25087	383 aa	Known RBP	5.96	□□□□□ -1.45
CHL4	YDR254W	CRM1	P30822	1084 aa	Known RBP	5.96	□□□□□ -1.45
CHL4	YDR254W	MRP20	P32387	263 aa		5.96	□□□□□ -1.45
CHL4	YDR254W	BZZ1	P38822	633 aa		5.96	□□□□□ -1.45
CHL4	YDR254W	SSP120	P39931	234 aa	Known RBP	5.96	□□□□□ -1.45
CHL4	YDR254W	RTR1	P40084	226 aa	Predicted RBP	5.96	□□□□□ -1.45
CHL4	YDR254W	TAF4	P50105	388 aa		5.96	□□□□□ -1.45
CHL4	YDR254W	RIM8	P53179	542 aa		5.96	□□□□□ -1.45
CHL4	YDR254W	YGR067C	P53243	804 aa		5.96	□□□□□ -1.45
CHL4	YDR254W	YGR111W	P53265	400 aa		5.96	□□□□□ -1.45
CHL4	YDR254W	YMR210W	Q03649	449 aa		5.96	□□□□□ -1.45
CHL4	YDR254W	PUS7	Q08647	676 aa	Known RBP	5.96	□□□□□ -1.45
CHL4	YDR254W	LEU9	Q12166	604 aa	Known RBP	5.96	□□□□□ -1.45
CHL4	YDR254W	HOS1	Q12214	470 aa		5.96	□□□□□ -1.45
CHL4	YDR254W	COX17	Q12287	69 aa		5.96	□□□□□ -1.45
CHL4	YDR254W	MED4	Q12343	284 aa		5.96	□□□□□ -1.45
CHL4	YDR254W	LAG2	Q92325	660 aa		5.96	□□□□□ -1.45
CHL4	YDR254W	GLN4	P13188	809 aa	Known RBP	5.95	□□□□□ -1.46
CHL4	YDR254W	RIT1	P23796	513 aa		5.95	□□□□□ -1.46
CHL4	YDR254W	DGR2	P32330	852 aa		5.95	□□□□□ -1.46
CHL4	YDR254W	SEF1	P34228	1148 aa		5.95	□□□□□ -1.46
CHL4	YDR254W	KKQ8	P36004	724 aa		5.95	□□□□□ -1.46
CHL4	YDR254W	RSM22	P36056	628 aa		5.95	□□□□□ -1.46
CHL4	YDR254W	SMF2	P38778	549 aa		5.95	□□□□□ -1.46
CHL4	YDR254W	MNN9	P39107	395 aa	Known RBP	5.95	□□□□□ -1.46
CHL4	YDR254W	CAK1	P43568	368 aa	Predicted RBP	5.95	□□□□□ -1.46
CHL4	YDR254W	YFR018C	P43599	363 aa		5.95	□□□□□ -1.46
CHL4	YDR254W	SMC3	P47037	1230 aa		5.95	□□□□□ -1.46
CHL4	YDR254W	ESBP6	P53918	673 aa		5.95	□□□□□ -1.46
CHL4	YDR254W	RSN1	Q03516	953 aa		5.95	□□□□□ -1.46
CHL4	YDR254W	TPP1	Q03796	238 aa		5.95	□□□□□ -1.46
CHL4	YDR254W	ARX1	Q03862	593 aa	Known RBP	5.95	□□□□□ -1.46
CHL4	YDR254W	RAD30	Q04049	632 aa		5.95	□□□□□ -1.46
CHL4	YDR254W	YLR173W	Q06247	608 aa		5.95	□□□□□ -1.46
CHL4	YDR254W	DCI1	Q08558	271 aa		5.95	□□□□□ -1.46
CHL4	YDR254W	TEF1	P02994	458 aa	Known RBP	5.94	□□□□□ -1.46
CHL4	YDR254W	PET494	P07390	489 aa	Predicted RBP	5.94	□□□□□ -1.46
CHL4	YDR254W	YEL076C-A	P0CX16	216 aa		5.94	□□□□□ -1.46
CHL4	YDR254W	YLR464W	P0CX17	216 aa		5.94	□□□□□ -1.46
CHL4	YDR254W	CDC26	P14724	124 aa		5.94	□□□□□ -1.46
CHL4	YDR254W	YPK2	P18961	677 aa		5.94	□□□□□ -1.46
CHL4	YDR254W	YCR016W	P25617	290 aa	Known RBP	5.94	□□□□□ -1.46
CHL4	YDR254W	REG2	P38232	338 aa		5.94	□□□□□ -1.46
CHL4	YDR254W	ATG14	P38270	344 aa		5.94	□□□□□ -1.46
CHL4	YDR254W	YHR182W	P38870	785 aa		5.94	□□□□□ -1.46
CHL4	YDR254W	YEL076C	P39971	216 aa		5.94	□□□□□ -1.46
CHL4	YDR254W	HXT16	P47185	567 aa		5.94	□□□□□ -1.46
CHL4	YDR254W	RRP46	P53256	223 aa	Predicted RBP	5.94	□□□□□ -1.46
CHL4	YDR254W	REG1	Q00816	1014 aa		5.94	□□□□□ -1.46
CHL4	YDR254W	RLI1	Q03195	608 aa	Known RBP	5.94	□□□□□ -1.46
CHL4	YDR254W	PPM1	Q04081	328 aa		5.94	□□□□□ -1.46
CHL4	YDR254W	ECM11	Q04110	302 aa		5.94	□□□□□ -1.46
CHL4	YDR254W	GTO3	Q04806	366 aa		5.94	□□□□□ -1.46
CHL4	YDR254W	YLR455W	Q06188	304 aa		5.94	□□□□□ -1.46
CHL4	YDR254W	DSE3	Q08729	430 aa		5.94	□□□□□ -1.46
CHL4	YDR254W	RTK1	Q12100	620 aa	Predicted RBP	5.94	□□□□□ -1.46
CHL4	YDR254W	RIO1	Q12196	484 aa	Known RBP	5.94	□□□□□ -1.46
CHL4	YDR254W	YDL177C	Q12257	170 aa		5.94	□□□□□ -1.46
CHL4	YDR254W	TFB5	Q3E7C1	72 aa	Predicted RBP	5.94	□□□□□ -1.46
CHL4	YDR254W	NBL1	Q3E7Y6	73 aa		5.94	□□□□□ -1.46
CHL4	YDR254W	YKR051W	P36142	418 aa		5.93	□□□□□ -1.46
CHL4	YDR254W	VID24	P38263	362 aa		5.93	□□□□□ -1.46
CHL4	YDR254W	PNT1	P38969	423 aa		5.93	□□□□□ -1.46
CHL4	YDR254W	RGI2	P40188	164 aa		5.93	□□□□□ -1.46
CHL4	YDR254W	EMC2	P47133	292 aa	Known RBP	5.93	□□□□□ -1.46
CHL4	YDR254W	IMA1	P53051	589 aa		5.93	□□□□□ -1.46
CHL4	YDR254W	YGL138C	P53122	345 aa		5.93	□□□□□ -1.46
CHL4	YDR254W	YMR102C	Q03177	834 aa		5.93	□□□□□ -1.46
CHL4	YDR254W	RCO1	Q04779	684 aa		5.93	□□□□□ -1.46
CHL4	YDR254W	CRF1	Q04930	467 aa		5.93	□□□□□ -1.46
CHL4	YDR254W	RCL1	Q08096	367 aa	Predicted RBP	5.93	□□□□□ -1.46
CHL4	YDR254W	GSH2	Q08220	491 aa		5.93	□□□□□ -1.46
CHL4	YDR254W	VIK1	Q12045	647 aa		5.93	□□□□□ -1.46
CHL4	YDR254W	RSR1	P13856	272 aa		5.93	□□□□□ -1.46
CHL4	YDR254W	AFG1	P32317	509 aa		5.93	□□□□□ -1.46
CHL4	YDR254W	OCT1	P35999	772 aa		5.93	□□□□□ -1.46
CHL4	YDR254W	ATP3	P38077	311 aa	Known RBP	5.93	□□□□□ -1.46
CHL4	YDR254W	UBP13	P38187	747 aa		5.93	□□□□□ -1.46
CHL4	YDR254W	FSH1	P38777	243 aa	Known RBP	5.93	□□□□□ -1.46
CHL4	YDR254W	SSO2	P39926	295 aa		5.93	□□□□□ -1.46
CHL4	YDR254W	RRT14	P40470	206 aa		5.93	□□□□□ -1.46
CHL4	YDR254W	MET28	P40573	187 aa		5.93	□□□□□ -1.46
CHL4	YDR254W	MAD2	P40958	196 aa		5.93	□□□□□ -1.46
CHL4	YDR254W	VMA13	P41807	478 aa	Known RBP	5.93	□□□□□ -1.46
CHL4	YDR254W	DLD2	P46681	530 aa	Known RBP	5.93	□□□□□ -1.46
CHL4	YDR254W	GLO1	P50107	326 aa		5.93	□□□□□ -1.46
CHL4	YDR254W	YNL143C	P53908	130 aa		5.93	□□□□□ -1.46

Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms