RNA–Protein interactions for RNA: YDR054C

CDC34, Transcript of Ubiquitin-conjugating enzyme (E2), yeastyeast

Gene CDC34, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC34YDR054C HLR1Q04429 423 aa6.26□□□□□ -1.41
CDC34YDR054C CIR2Q08822 631 aa6.26□□□□□ -1.41
CDC34YDR054C PUF2Q12221 1075 aaKnown RBP RIP-Chip data6.26□□□□□ -1.41not detected
CDC34YDR054C RPB2P08518 1224 aaKnown RBP6.25□□□□□ -1.41
CDC34YDR054C HEM15P16622 393 aa6.25□□□□□ -1.41
CDC34YDR054C MET16P18408 261 aaPredicted RBP6.25□□□□□ -1.41
CDC34YDR054C HOP1P20050 605 aa6.25□□□□□ -1.41
CDC34YDR054C PEX1P24004 1043 aa6.25□□□□□ -1.41
CDC34YDR054C NPP1P25353 742 aa6.25□□□□□ -1.41
CDC34YDR054C NFS1P25374 497 aa6.25□□□□□ -1.41
CDC34YDR054C KRR1P25586 316 aaPredicted RBP6.25□□□□□ -1.41
CDC34YDR054C RAD16P31244 790 aa6.25□□□□□ -1.41
CDC34YDR054C DAL1P32375 460 aa6.25□□□□□ -1.41
CDC34YDR054C YKL100CP34248 587 aa6.25□□□□□ -1.41
CDC34YDR054C VRP1P37370 817 aa6.25□□□□□ -1.41
CDC34YDR054C CCZ1P38273 704 aa6.25□□□□□ -1.41
CDC34YDR054C YBP1P38315 674 aa6.25□□□□□ -1.41
CDC34YDR054C HXT6P39003 570 aaKnown RBP6.25□□□□□ -1.41
CDC34YDR054C HXT7P39004 570 aa6.25□□□□□ -1.41
CDC34YDR054C SMX2P40204 77 aaKnown RBP6.25□□□□□ -1.41
CDC34YDR054C CTK3P46963 296 aaPredicted RBP6.25□□□□□ -1.41
CDC34YDR054C URB2P47108 1174 aa6.25□□□□□ -1.41
CDC34YDR054C TCB2P48231 1178 aa6.25□□□□□ -1.41
CDC34YDR054C HOS2P53096 452 aaPredicted RBP6.25□□□□□ -1.41
CDC34YDR054C CPR6P53691 371 aaKnown RBP6.25□□□□□ -1.41
CDC34YDR054C BIO5P53744 561 aaKnown RBP6.25□□□□□ -1.41
CDC34YDR054C MRPL19P53875 158 aa6.25□□□□□ -1.41
CDC34YDR054C MOT3P54785 490 aaKnown RBP6.25□□□□□ -1.41
CDC34YDR054C MTD1Q02046 320 aaKnown RBP6.25□□□□□ -1.41
CDC34YDR054C GCN5Q03330 439 aa6.25□□□□□ -1.41
CDC34YDR054C USA1Q03714 838 aa6.25□□□□□ -1.41
CDC34YDR054C ARA2Q04212 335 aa6.25□□□□□ -1.41
CDC34YDR054C YKU80Q04437 629 aa6.25□□□□□ -1.41
CDC34YDR054C ECM22Q05958 814 aaPredicted RBP6.25□□□□□ -1.41
CDC34YDR054C STE23Q06010 1027 aa6.25□□□□□ -1.41
CDC34YDR054C BRE4Q07660 1125 aa6.25□□□□□ -1.41
CDC34YDR054C AAD4Q07747 329 aa6.25□□□□□ -1.41
CDC34YDR054C PSR1Q07800 427 aa6.25□□□□□ -1.41
CDC34YDR054C YIG1Q08956 461 aa6.25□□□□□ -1.41
CDC34YDR054C ARP7Q12406 477 aa6.25□□□□□ -1.41
CDC34YDR054C AHC1Q12433 566 aa6.25□□□□□ -1.41
CDC34YDR054C CMD1P06787 147 aaKnown RBP6.24□□□□□ -1.41
CDC34YDR054C RPL11AP0C0W9 174 aaKnown RBP6.24□□□□□ -1.41
CDC34YDR054C ADH4P10127 382 aa6.24□□□□□ -1.41
CDC34YDR054C PDE1P22434 369 aa6.24□□□□□ -1.41
CDC34YDR054C YIH1P25637 258 aa6.24□□□□□ -1.41
CDC34YDR054C URK1P27515 501 aa6.24□□□□□ -1.41
CDC34YDR054C MAC1P35192 417 aa6.24□□□□□ -1.41
CDC34YDR054C DHR2P36009 735 aaPredicted RBP6.24□□□□□ -1.41
CDC34YDR054C OAF3P36023 863 aa6.24□□□□□ -1.41
CDC34YDR054C SDS22P36047 338 aa6.24□□□□□ -1.41
CDC34YDR054C YKR051WP36142 418 aa6.24□□□□□ -1.41
CDC34YDR054C TFA2P36145 328 aa6.24□□□□□ -1.41
CDC34YDR054C SHM2P37291 469 aaKnown RBP6.24□□□□□ -1.41
CDC34YDR054C YBR225WP38321 900 aa6.24□□□□□ -1.41
CDC34YDR054C DIA4P38705 446 aaPredicted RBP6.24□□□□□ -1.41
CDC34YDR054C AIM18P38884 321 aa6.24□□□□□ -1.41
CDC34YDR054C CIN4P39110 191 aa6.24□□□□□ -1.41
CDC34YDR054C YEL068CP39977 110 aa6.24□□□□□ -1.41
CDC34YDR054C VHR1P40522 640 aa6.24□□□□□ -1.41
CDC34YDR054C AAD14P42884 376 aa6.24□□□□□ -1.41
CDC34YDR054C TAH11P47112 604 aa6.24□□□□□ -1.41
CDC34YDR054C BFA1P47113 574 aa6.24□□□□□ -1.41
CDC34YDR054C YJR079WP47126 109 aa6.24□□□□□ -1.41
CDC34YDR054C UPF3P48412 387 aaKnown RBP6.24□□□□□ -1.41
CDC34YDR054C RFX1P48743 811 aa6.24□□□□□ -1.41
CDC34YDR054C UBC9P50623 157 aaPredicted RBP6.24□□□□□ -1.41
CDC34YDR054C PEX31P53203 462 aa6.24□□□□□ -1.41
CDC34YDR054C YGR127WP53275 312 aa6.24□□□□□ -1.41
CDC34YDR054C YNR065CP53751 1116 aa6.24□□□□□ -1.41
CDC34YDR054C YMR160WQ03823 816 aa6.24□□□□□ -1.41
CDC34YDR054C AIM32Q04689 311 aa6.24□□□□□ -1.41
CDC34YDR054C TPO1Q07824 586 aa6.24□□□□□ -1.41
CDC34YDR054C APC5Q08683 685 aa6.24□□□□□ -1.41
CDC34YDR054C YOR223WQ12015 292 aa6.24□□□□□ -1.41
CDC34YDR054C YLL056CQ12177 298 aa6.24□□□□□ -1.41
CDC34YDR054C LCB4Q12246 624 aa6.24□□□□□ -1.41
CDC34YDR054C AVL9Q12500 764 aa6.24□□□□□ -1.41
CDC34YDR054C RPL11BQ3E757 174 aaPredicted RBP6.24□□□□□ -1.41
CDC34YDR054C SEY1Q99287 776 aa6.24□□□□□ -1.41
CDC34YDR054C LAA1P39526 2014 aa6.24□□□□□ -1.41
CDC34YDR054C SPE1P08432 466 aa6.23□□□□□ -1.41
CDC34YDR054C POL3P15436 1097 aa6.23□□□□□ -1.41
CDC34YDR054C PHO3P24031 467 aa6.23□□□□□ -1.41
CDC34YDR054C APM3P38153 483 aa6.23□□□□□ -1.41
CDC34YDR054C FSH1P38777 243 aaKnown RBP6.23□□□□□ -1.41
CDC34YDR054C STL1P39932 569 aa6.23□□□□□ -1.41
CDC34YDR054C SCC4P40090 624 aa6.23□□□□□ -1.41
CDC34YDR054C ATM1P40416 690 aa6.23□□□□□ -1.41
CDC34YDR054C NEO1P40527 1151 aa6.23□□□□□ -1.41
CDC34YDR054C VPS25P47142 202 aa6.23□□□□□ -1.41
CDC34YDR054C MCM6P53091 1017 aaKnown RBP6.23□□□□□ -1.41
CDC34YDR054C MRPL13Q02204 264 aa6.23□□□□□ -1.41
CDC34YDR054C PIR3Q03180 325 aa6.23□□□□□ -1.41
CDC34YDR054C PRP3Q03338 469 aaPredicted RBP6.23□□□□□ -1.41
CDC34YDR054C YLR257WQ06146 321 aaKnown RBP6.23□□□□□ -1.41
CDC34YDR054C OMS1Q06668 471 aa6.23□□□□□ -1.41
CDC34YDR054C SOG2Q08817 791 aa6.23□□□□□ -1.41
CDC34YDR054C RPS21BQ3E754 87 aaKnown RBP6.23□□□□□ -1.41
CDC34YDR054C AI5_ALPHAQ9ZZX1 630 aa6.23□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms