RNA–Protein interactions for RNA: YDL231C

BRE4, Transcript of Zinc finger protein containing five transmembrane domains, yeast

Gene BRE4, Length 3,378 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BRE4	YDL231C	YEL077C	Q3E7X8	1277 aa		4.2	□□□□□ -1.74
BRE4	YDL231C	BEM2	P39960	2167 aa	Known RBP	4.19	□□□□□ -1.74
BRE4	YDL231C	ARG81	P05085	880 aa		4.19	□□□□□ -1.74
BRE4	YDL231C	TPK1	P06244	397 aa		4.19	□□□□□ -1.74
BRE4	YDL231C	HEM1	P09950	548 aa	Predicted RBP	4.19	□□□□□ -1.74
BRE4	YDL231C	SCH9	P11792	824 aa	Known RBP	4.19	□□□□□ -1.74
BRE4	YDL231C	SPT15	P13393	240 aa	Known RBP	4.19	□□□□□ -1.74
BRE4	YDL231C	CCA1	P21269	546 aa		4.19	□□□□□ -1.74
BRE4	YDL231C	DAL81	P21657	970 aa		4.19	□□□□□ -1.74
BRE4	YDL231C	YCK2	P23292	546 aa	Known RBP	4.19	□□□□□ -1.74
BRE4	YDL231C	PGS1	P25578	521 aa		4.19	□□□□□ -1.74
BRE4	YDL231C	BUD14	P27637	709 aa		4.19	□□□□□ -1.74
BRE4	YDL231C	HEM12	P32347	362 aa	Predicted RBP	4.19	□□□□□ -1.74
BRE4	YDL231C	HES1	P35843	434 aa		4.19	□□□□□ -1.74
BRE4	YDL231C	DCW1	P36091	449 aa		4.19	□□□□□ -1.74
BRE4	YDL231C	PDX3	P38075	228 aa	Known RBP	4.19	□□□□□ -1.74
BRE4	YDL231C	RAD55	P38953	406 aa		4.19	□□□□□ -1.74
BRE4	YDL231C	YEN1	P40028	759 aa		4.19	□□□□□ -1.74
BRE4	YDL231C	DPH1	P40487	425 aa	Known RBP	4.19	□□□□□ -1.74
BRE4	YDL231C	ARF3	P40994	183 aa	RIP-Chip data	4.19	□□□□□ -1.74	not detected
BRE4	YDL231C	NPY1	P53164	384 aa		4.19	□□□□□ -1.74
BRE4	YDL231C	COS6	P53344	381 aa		4.19	□□□□□ -1.74
BRE4	YDL231C	SEG1	Q04279	960 aa		4.19	□□□□□ -1.74
BRE4	YDL231C	SWA2	Q06677	668 aa		4.19	□□□□□ -1.74
BRE4	YDL231C	COS2	P0CX12	379 aa		4.19	□□□□□ -1.74
BRE4	YDL231C	COS3	P0CX13	379 aa		4.19	□□□□□ -1.74
BRE4	YDL231C	YSP3	P25036	478 aa		4.19	□□□□□ -1.74
BRE4	YDL231C	IDH2	P28241	369 aa	Known RBP	4.19	□□□□□ -1.74
BRE4	YDL231C	PYC2	P32327	1180 aa	Known RBP	4.19	□□□□□ -1.74
BRE4	YDL231C	CUE2	P36075	443 aa	Known RBP	4.19	□□□□□ -1.74
BRE4	YDL231C	RDH54	P38086	958 aa		4.19	□□□□□ -1.74
BRE4	YDL231C	RFS1	P38234	210 aa	Known RBP	4.19	□□□□□ -1.74
BRE4	YDL231C	MMS21	P38632	267 aa		4.19	□□□□□ -1.74
BRE4	YDL231C	LAS21	P40367	830 aa		4.19	□□□□□ -1.74
BRE4	YDL231C	YIL161W	P40449	235 aa	Known RBP	4.19	□□□□□ -1.74
BRE4	YDL231C	COS4	P43542	379 aa		4.19	□□□□□ -1.74
BRE4	YDL231C	YNL181W	P53878	407 aa		4.19	□□□□□ -1.74
BRE4	YDL231C	SPO19	Q03029	223 aa		4.19	□□□□□ -1.74
BRE4	YDL231C	NSE5	Q03718	556 aa		4.19	□□□□□ -1.74
BRE4	YDL231C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
BRE4	YDL231C	TMA46	Q12000	345 aa	Known RBP	4.19	□□□□□ -1.74
BRE4	YDL231C	YLR049C	Q12110	428 aa		4.19	□□□□□ -1.74
BRE4	YDL231C	AVL9	Q12500	764 aa		4.19	□□□□□ -1.74
BRE4	YDL231C	CAR1	P00812	333 aa	Known RBP	4.19	□□□□□ -1.74
BRE4	YDL231C	ENO1	P00924	437 aa	Known RBP	4.19	□□□□□ -1.74
BRE4	YDL231C	HEM2	P05373	342 aa		4.19	□□□□□ -1.74
BRE4	YDL231C	MSF1	P08425	469 aa		4.19	□□□□□ -1.74
BRE4	YDL231C	MIH1	P23748	554 aa		4.19	□□□□□ -1.74
BRE4	YDL231C	PEX6	P33760	1030 aa		4.19	□□□□□ -1.74
BRE4	YDL231C	ATG12	P38316	186 aa		4.19	□□□□□ -1.74
BRE4	YDL231C	YAP1801	P38856	637 aa		4.19	□□□□□ -1.74
BRE4	YDL231C	YJR154W	P47181	346 aa		4.19	□□□□□ -1.74
BRE4	YDL231C	NUP100	Q02629	959 aa		4.19	□□□□□ -1.74
BRE4	YDL231C	YMR206W	Q03695	313 aa		4.19	□□□□□ -1.74
BRE4	YDL231C	ECM38	Q05902	660 aa	Predicted RBP	4.19	□□□□□ -1.74
BRE4	YDL231C	HBT1	Q07653	1046 aa	Known RBP	4.19	□□□□□ -1.74
BRE4	YDL231C	YOL036W	Q08206	761 aa		4.19	□□□□□ -1.74
BRE4	YDL231C	RGT2	Q12300	763 aa		4.19	□□□□□ -1.74
BRE4	YDL231C	PEX11	Q12462	236 aa		4.19	□□□□□ -1.74
BRE4	YDL231C	YPL247C	Q12523	523 aa		4.19	□□□□□ -1.74
BRE4	YDL231C	RHO2	P06781	192 aa		4.18	□□□□□ -1.74
BRE4	YDL231C	CMP2	P14747	604 aa		4.18	□□□□□ -1.74
BRE4	YDL231C	SKT5	P34226	696 aa		4.18	□□□□□ -1.74
BRE4	YDL231C	SLX1	P38324	304 aa		4.18	□□□□□ -1.74
BRE4	YDL231C	LEM3	P42838	414 aa		4.18	□□□□□ -1.74
BRE4	YDL231C	RSC8	P43609	557 aa	Known RBP	4.18	□□□□□ -1.74
BRE4	YDL231C	IML2	P47031	731 aa		4.18	□□□□□ -1.74
BRE4	YDL231C	BOL2	P53082	120 aa		4.18	□□□□□ -1.74
BRE4	YDL231C	PUS2	P53167	370 aa		4.18	□□□□□ -1.74
BRE4	YDL231C	FRE4	P53746	719 aa		4.18	□□□□□ -1.74
BRE4	YDL231C	YNR065C	P53751	1116 aa		4.18	□□□□□ -1.74
BRE4	YDL231C	RCO1	Q04779	684 aa		4.18	□□□□□ -1.74
BRE4	YDL231C	ESA1	Q08649	445 aa		4.18	□□□□□ -1.74
BRE4	YDL231C	RPN5	Q12250	445 aa	Known RBP	4.18	□□□□□ -1.74
BRE4	YDL231C	GPM3	Q12326	303 aa		4.18	□□□□□ -1.74
BRE4	YDL231C	SEC39	Q12745	709 aa		4.18	□□□□□ -1.74
BRE4	YDL231C	YOL087C	Q99247	1116 aa		4.18	□□□□□ -1.74
BRE4	YDL231C	ARG3	P05150	338 aa		4.18	□□□□□ -1.74
BRE4	YDL231C	CLN1	P20437	546 aa		4.18	□□□□□ -1.74
BRE4	YDL231C	SPS22	P25380	463 aa		4.18	□□□□□ -1.74
BRE4	YDL231C	RAD16	P31244	790 aa		4.18	□□□□□ -1.74
BRE4	YDL231C	IMP3	P32899	183 aa	Predicted RBP	4.18	□□□□□ -1.74
BRE4	YDL231C	TAT2	P38967	592 aa		4.18	□□□□□ -1.74
BRE4	YDL231C	ALG5	P40350	334 aa		4.18	□□□□□ -1.74
BRE4	YDL231C	MEP2	P41948	499 aa		4.18	□□□□□ -1.74
BRE4	YDL231C	RTT101	P47050	842 aa		4.18	□□□□□ -1.74
BRE4	YDL231C	NOP19	P53317	196 aa	Predicted RBP	4.18	□□□□□ -1.74
BRE4	YDL231C	PIR3	Q03180	325 aa		4.18	□□□□□ -1.74
BRE4	YDL231C	GOT1	Q03554	138 aa		4.18	□□□□□ -1.74
BRE4	YDL231C	RSC2	Q06488	889 aa		4.18	□□□□□ -1.74
BRE4	YDL231C	YPL191C	Q08930	360 aa		4.18	□□□□□ -1.74
BRE4	YDL231C	TOR2	P32600	2474 aa	Known RBP	4.18	□□□□□ -1.74
BRE4	YDL231C	RAS2	P01120	322 aa	Known RBP	4.17	□□□□□ -1.74
BRE4	YDL231C	CDC21	P06785	304 aa		4.17	□□□□□ -1.74
BRE4	YDL231C	ATP1	P07251	545 aa	Known RBP	4.17	□□□□□ -1.74
BRE4	YDL231C	EXO70	P19658	623 aa		4.17	□□□□□ -1.74
BRE4	YDL231C	CLB4	P24871	460 aa		4.17	□□□□□ -1.74
BRE4	YDL231C	MRPL9	P31334	269 aa		4.17	□□□□□ -1.74
BRE4	YDL231C	SIN4	P32259	974 aa		4.17	□□□□□ -1.74
BRE4	YDL231C	ATP11	P32453	318 aa		4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 10 ms