RNA–Protein interactions for RNA: YCR088W

ABP1, Transcript of Actin-binding protein of the cortical actin cytoskeleton, yeastyeast

Gene ABP1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP1YCR088W IMA1P53051 589 aa7.92□□□□□ -1.14
ABP1YCR088W ASI1P54074 624 aa7.92□□□□□ -1.14
ABP1YCR088W HXT15P54854 567 aa7.92□□□□□ -1.14
ABP1YCR088W YKR005CQ02203 525 aa7.92□□□□□ -1.14
ABP1YCR088W YML020WQ03722 664 aa7.92□□□□□ -1.14
ABP1YCR088W TAF12Q03761 539 aa7.92□□□□□ -1.14
ABP1YCR088W ENT5Q03769 411 aaKnown RBP7.92□□□□□ -1.14
ABP1YCR088W RSM24Q03976 319 aa7.92□□□□□ -1.14
ABP1YCR088W YMR226CQ05016 267 aaKnown RBP7.92□□□□□ -1.14
ABP1YCR088W MCM21Q06675 368 aa7.92□□□□□ -1.14
ABP1YCR088W TRE2Q08693 809 aa7.92□□□□□ -1.14
ABP1YCR088W NSL1Q12143 216 aa7.92□□□□□ -1.14
ABP1YCR088W AFI1Q99222 893 aa7.92□□□□□ -1.14
ABP1YCR088W MIS1P09440 975 aaKnown RBP7.91□□□□□ -1.14
ABP1YCR088W PHO81P17442 1178 aa7.91□□□□□ -1.14
ABP1YCR088W CLB2P24869 491 aa7.91□□□□□ -1.14
ABP1YCR088W POL4P25615 582 aa7.91□□□□□ -1.14
ABP1YCR088W BUB2P26448 306 aaPredicted RBP7.91□□□□□ -1.14
ABP1YCR088W ATP7P30902 174 aa7.91□□□□□ -1.14
ABP1YCR088W SAC1P32368 623 aaKnown RBP7.91□□□□□ -1.14
ABP1YCR088W CYS4P32582 507 aaKnown RBP7.91□□□□□ -1.14
ABP1YCR088W RPT5P33297 434 aaKnown RBP7.91□□□□□ -1.14
ABP1YCR088W DRE2P36152 348 aa7.91□□□□□ -1.14
ABP1YCR088W YBR056WP38081 501 aa7.91□□□□□ -1.14
ABP1YCR088W SHE3P38272 425 aaKnown RBP7.91□□□□□ -1.14
ABP1YCR088W AVT6P40074 448 aa7.91□□□□□ -1.14
ABP1YCR088W ELO3P40319 345 aa7.91□□□□□ -1.14
ABP1YCR088W RIC1P40395 1056 aa7.91□□□□□ -1.14
ABP1YCR088W SKP2P42843 763 aa7.91□□□□□ -1.14
ABP1YCR088W STB1P42845 420 aa7.91□□□□□ -1.14
ABP1YCR088W YGR053CP53234 283 aa7.91□□□□□ -1.14
ABP1YCR088W YGR054WP53235 642 aaKnown RBP7.91□□□□□ -1.14
ABP1YCR088W SPC98P53540 846 aa7.91□□□□□ -1.14
ABP1YCR088W YNL134CP53912 376 aaKnown RBP7.91□□□□□ -1.14
ABP1YCR088W YNL018CP53976 612 aa7.91□□□□□ -1.14
ABP1YCR088W SED5Q01590 340 aa7.91□□□□□ -1.14
ABP1YCR088W AIM32Q04689 311 aa7.91□□□□□ -1.14
ABP1YCR088W RIF2Q06208 395 aa7.91□□□□□ -1.14
ABP1YCR088W GPM2Q12008 311 aa7.91□□□□□ -1.14
ABP1YCR088W IES3Q12345 250 aa7.91□□□□□ -1.14
ABP1YCR088W HIS1P00498 297 aaKnown RBP7.9□□□□□ -1.14
ABP1YCR088W BCY1P07278 416 aaKnown RBP7.9□□□□□ -1.14
ABP1YCR088W ACO1P19414 778 aaKnown RBP RIP-Chip data7.9□□□□□ -1.14not detected
ABP1YCR088W YCK2P23292 546 aaKnown RBP7.9□□□□□ -1.14
ABP1YCR088W DBR1P24309 405 aaKnown RBP7.9□□□□□ -1.14
ABP1YCR088W COQ8P27697 501 aa7.9□□□□□ -1.14
ABP1YCR088W MUP3P38734 546 aa7.9□□□□□ -1.14
ABP1YCR088W YAP1801P38856 637 aa7.9□□□□□ -1.14
ABP1YCR088W SWD1P39706 426 aa7.9□□□□□ -1.14
ABP1YCR088W IMA5P40884 581 aa7.9□□□□□ -1.14
ABP1YCR088W ARE2P53629 642 aaKnown RBP7.9□□□□□ -1.14
ABP1YCR088W MET14Q02196 202 aa7.9□□□□□ -1.14
ABP1YCR088W GGA1Q06336 557 aa7.9□□□□□ -1.14
ABP1YCR088W UPC2Q12151 913 aa7.9□□□□□ -1.14
ABP1YCR088W TY3A-GQ12173 290 aa7.9□□□□□ -1.14
ABP1YCR088W TY3A-IQ99219 290 aa7.9□□□□□ -1.14
ABP1YCR088W CCP1P00431 361 aa7.89□□□□□ -1.15
ABP1YCR088W GAL80P04387 435 aa7.89□□□□□ -1.15
ABP1YCR088W SEC53P07283 254 aaKnown RBP7.89□□□□□ -1.15
ABP1YCR088W AMD1P15274 810 aaKnown RBP7.89□□□□□ -1.15
ABP1YCR088W IDI1P15496 288 aa7.89□□□□□ -1.15
ABP1YCR088W YAP1P19880 650 aaKnown RBP7.89□□□□□ -1.15
ABP1YCR088W HBS1P32769 611 aaKnown RBP7.89□□□□□ -1.15
ABP1YCR088W TKL2P33315 681 aa7.89□□□□□ -1.15
ABP1YCR088W DEF1P35732 738 aaKnown RBP7.89□□□□□ -1.15
ABP1YCR088W MAE1P36013 669 aaKnown RBP7.89□□□□□ -1.15
ABP1YCR088W SRL3P36167 246 aa7.89□□□□□ -1.15
ABP1YCR088W DSF2P38213 736 aa7.89□□□□□ -1.15
ABP1YCR088W YHL026CP38740 315 aa7.89□□□□□ -1.15
ABP1YCR088W FAD1P38913 306 aa7.89□□□□□ -1.15
ABP1YCR088W RCR2Q03446 210 aaKnown RBP7.89□□□□□ -1.15
ABP1YCR088W FMP42Q04991 504 aa7.89□□□□□ -1.15
ABP1YCR088W PIB1Q06651 286 aa7.89□□□□□ -1.15
ABP1YCR088W YDL073WQ07454 984 aa7.89□□□□□ -1.15
ABP1YCR088W DTD1Q07648 150 aaKnown RBP7.89□□□□□ -1.15
ABP1YCR088W YOL019WQ08157 551 aa7.89□□□□□ -1.15
ABP1YCR088W MRH1Q12117 320 aaPredicted RBP7.89□□□□□ -1.15
ABP1YCR088W AFT1P22149 690 aa7.89□□□□□ -1.15
ABP1YCR088W RPS5P26783 225 aaKnown RBP7.89□□□□□ -1.15
ABP1YCR088W PHO91P27514 894 aa7.89□□□□□ -1.15
ABP1YCR088W STE14P32584 239 aa7.89□□□□□ -1.15
ABP1YCR088W NUF2P33895 451 aa7.89□□□□□ -1.15
ABP1YCR088W GPT2P36148 743 aa7.89□□□□□ -1.15
ABP1YCR088W ROT2P38138 954 aa7.89□□□□□ -1.15
ABP1YCR088W SIF2P38262 535 aa7.89□□□□□ -1.15
ABP1YCR088W URA8P38627 578 aaPredicted RBP7.89□□□□□ -1.15
ABP1YCR088W PEX18P38855 283 aa7.89□□□□□ -1.15
ABP1YCR088W ELP2P42935 788 aa7.89□□□□□ -1.15
ABP1YCR088W PTR3P43606 678 aa7.89□□□□□ -1.15
ABP1YCR088W RTT101P47050 842 aa7.89□□□□□ -1.15
ABP1YCR088W GCV2P49095 1034 aa7.89□□□□□ -1.15
ABP1YCR088W DIA3P52290 468 aa7.89□□□□□ -1.15
ABP1YCR088W REG1Q00816 1014 aa7.89□□□□□ -1.15
ABP1YCR088W RPN9Q04062 393 aaKnown RBP7.89□□□□□ -1.15
ABP1YCR088W PSR1Q07800 427 aa7.89□□□□□ -1.15
ABP1YCR088W YLR049CQ12110 428 aa7.89□□□□□ -1.15
ABP1YCR088W PHO3P24031 467 aa7.88□□□□□ -1.15
ABP1YCR088W YCR099CP25657 155 aa7.88□□□□□ -1.15
ABP1YCR088W ITR2P30606 609 aa7.88□□□□□ -1.15
ABP1YCR088W FUN30P31380 1131 aa7.88□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 55.6 ms