RNA–Protein interactions for RNA: YBR165W

UBS1, Transcript of Ubiquitin-conjugating enzyme suppressor that regulates Cdc34p, yeast

Gene UBS1, Length 834 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBS1	YBR165W	CDC15	P27636	974 aa		4.78	□□□□□ -1.64
UBS1	YBR165W	RGT1	P32862	1170 aa		4.78	□□□□□ -1.64
UBS1	YBR165W	VRG4	P40107	337 aa		4.78	□□□□□ -1.64
UBS1	YBR165W	YFR020W	P43600	232 aa		4.78	□□□□□ -1.64
UBS1	YBR165W	SGF73	P53165	657 aa		4.78	□□□□□ -1.64
UBS1	YBR165W	PSR2	Q07949	397 aa		4.78	□□□□□ -1.64
UBS1	YBR165W	PPZ1	P26570	692 aa		4.77	□□□□□ -1.65
UBS1	YBR165W	TEF4	P36008	412 aa	Known RBP	4.77	□□□□□ -1.65
UBS1	YBR165W	ESL2	P36168	1195 aa		4.77	□□□□□ -1.65
UBS1	YBR165W	PSD1	P39006	500 aa		4.77	□□□□□ -1.65
UBS1	YBR165W	CCT4	P39078	528 aa	Known RBP	4.77	□□□□□ -1.65
UBS1	YBR165W	PKP1	P40530	394 aa		4.77	□□□□□ -1.65
UBS1	YBR165W	SAD1	P43589	448 aa		4.77	□□□□□ -1.65
UBS1	YBR165W	YJR008W	P47085	338 aa		4.77	□□□□□ -1.65
UBS1	YBR165W	REG1	Q00816	1014 aa		4.77	□□□□□ -1.65
UBS1	YBR165W	RSF1	Q05043	376 aa		4.77	□□□□□ -1.65
UBS1	YBR165W	PSK2	Q08217	1101 aa		4.77	□□□□□ -1.65
UBS1	YBR165W	TRM8	Q12009	286 aa		4.77	□□□□□ -1.65
UBS1	YBR165W	TAH18	Q12181	623 aa		4.77	□□□□□ -1.65
UBS1	YBR165W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.76	□□□□□ -1.65	not detected
UBS1	YBR165W	HNM1	P19807	563 aa		4.76	□□□□□ -1.65
UBS1	YBR165W	GAC1	P28006	793 aa		4.76	□□□□□ -1.65
UBS1	YBR165W	PDR3	P33200	976 aa		4.76	□□□□□ -1.65
UBS1	YBR165W	PSY4	P38193	441 aa		4.76	□□□□□ -1.65
UBS1	YBR165W	RFC1	P38630	861 aa	Known RBP	4.76	□□□□□ -1.65
UBS1	YBR165W	BZZ1	P38822	633 aa		4.76	□□□□□ -1.65
UBS1	YBR165W	IAH1	P41734	238 aa		4.76	□□□□□ -1.65
UBS1	YBR165W	YNL234W	P53857	426 aa		4.76	□□□□□ -1.65
UBS1	YBR165W	SNF1	P06782	633 aa	Known RBP	4.75	□□□□□ -1.65
UBS1	YBR165W	RPB2	P08518	1224 aa	Known RBP	4.75	□□□□□ -1.65
UBS1	YBR165W	MGR1	P25573	417 aa		4.75	□□□□□ -1.65
UBS1	YBR165W	RAD24	P32641	659 aa		4.75	□□□□□ -1.65
UBS1	YBR165W	MIA40	P36046	403 aa		4.75	□□□□□ -1.65
UBS1	YBR165W	UME6	P39001	836 aa		4.75	□□□□□ -1.65
UBS1	YBR165W	RIC1	P40395	1056 aa		4.75	□□□□□ -1.65
UBS1	YBR165W	SMC3	P47037	1230 aa		4.75	□□□□□ -1.65
UBS1	YBR165W	HOS2	P53096	452 aa	Predicted RBP	4.75	□□□□□ -1.65
UBS1	YBR165W	YMR178W	Q03219	274 aa	Known RBP	4.75	□□□□□ -1.65
UBS1	YBR165W	EKI1	Q03764	534 aa		4.75	□□□□□ -1.65
UBS1	YBR165W	RCO1	Q04779	684 aa		4.75	□□□□□ -1.65
UBS1	YBR165W	YMR317W	Q04893	1140 aa		4.75	□□□□□ -1.65
UBS1	YBR165W	VID22	Q05934	901 aa		4.75	□□□□□ -1.65
UBS1	YBR165W	NUS1	Q12063	375 aa		4.75	□□□□□ -1.65
UBS1	YBR165W	YOR019W	Q99248	730 aa		4.75	□□□□□ -1.65
UBS1	YBR165W	SSM4	P40318	1319 aa		4.74	□□□□□ -1.65
UBS1	YBR165W	HXK2	P04807	486 aa	Known RBP	4.74	□□□□□ -1.65
UBS1	YBR165W	GUK1	P15454	187 aa	Known RBP	4.74	□□□□□ -1.65
UBS1	YBR165W	SEC1	P30619	724 aa	Known RBP	4.74	□□□□□ -1.65
UBS1	YBR165W	RTS2	P40962	232 aa		4.74	□□□□□ -1.65
UBS1	YBR165W	ATG27	P46989	271 aa		4.74	□□□□□ -1.65
UBS1	YBR165W	SMA1	Q02651	245 aa		4.74	□□□□□ -1.65
UBS1	YBR165W	YLR352W	Q06479	807 aa		4.74	□□□□□ -1.65
UBS1	YBR165W	ATG9	Q12142	997 aa		4.74	□□□□□ -1.65
UBS1	YBR165W	YLR302C	O13544	120 aa		4.73	□□□□□ -1.65
UBS1	YBR165W	RPB8	P20436	146 aa		4.73	□□□□□ -1.65
UBS1	YBR165W	RPN2	P32565	945 aa	Known RBP	4.73	□□□□□ -1.65
UBS1	YBR165W	CNS1	P33313	385 aa		4.73	□□□□□ -1.65
UBS1	YBR165W	ARP1	P38696	384 aa		4.73	□□□□□ -1.65
UBS1	YBR165W	PHO90	P39535	881 aa		4.73	□□□□□ -1.65
UBS1	YBR165W	IME4	P41833	600 aa		4.73	□□□□□ -1.65
UBS1	YBR165W	DPB11	P47027	764 aa	Predicted RBP	4.73	□□□□□ -1.65
UBS1	YBR165W	CUL3	P53202	744 aa		4.73	□□□□□ -1.65
UBS1	YBR165W	MUB1	Q03162	620 aa		4.73	□□□□□ -1.65
UBS1	YBR165W	EDE1	P34216	1381 aa		4.73	□□□□□ -1.65
UBS1	YBR165W	GID7	P25569	745 aa		4.72	□□□□□ -1.65
UBS1	YBR165W	MRS6	P32864	603 aa	Known RBP	4.72	□□□□□ -1.65
UBS1	YBR165W	STV1	P37296	890 aa		4.72	□□□□□ -1.65
UBS1	YBR165W	RGI2	P40188	164 aa		4.72	□□□□□ -1.65
UBS1	YBR165W	YGL260W	P53056	76 aa		4.72	□□□□□ -1.65
UBS1	YBR165W	YGR021W	P53212	290 aa		4.72	□□□□□ -1.65
UBS1	YBR165W	GTR1	Q00582	310 aa		4.72	□□□□□ -1.65
UBS1	YBR165W	INA17	Q02888	182 aa		4.72	□□□□□ -1.65
UBS1	YBR165W	ATG16	Q03818	150 aa		4.72	□□□□□ -1.65
UBS1	YBR165W	PHO2	P07269	559 aa		4.71	□□□□□ -1.66
UBS1	YBR165W	SNU114	P36048	1008 aa	Known RBP	4.71	□□□□□ -1.66
UBS1	YBR165W	UIP3	P39547	235 aa		4.71	□□□□□ -1.66
UBS1	YBR165W	SEC24	P40482	926 aa	Known RBP	4.71	□□□□□ -1.66
UBS1	YBR165W	FET5	P43561	622 aa		4.71	□□□□□ -1.66
UBS1	YBR165W	PIL1	P53252	339 aa	Known RBP	4.71	□□□□□ -1.66
UBS1	YBR165W	NNF2	P53253	936 aa		4.71	□□□□□ -1.66
UBS1	YBR165W	YTH1	Q06102	208 aa	Predicted RBP	4.71	□□□□□ -1.66
UBS1	YBR165W	YDL218W	Q07629	317 aa		4.71	□□□□□ -1.66
UBS1	YBR165W	YOL159C	Q08300	171 aa		4.71	□□□□□ -1.66
UBS1	YBR165W	YBR085C-A	O43137	85 aa		4.7	□□□□□ -1.66
UBS1	YBR165W	BAR1	P12630	587 aa		4.7	□□□□□ -1.66
UBS1	YBR165W	PWP2	P25635	923 aa	Known RBP	4.7	□□□□□ -1.66
UBS1	YBR165W	MRP20	P32387	263 aa		4.7	□□□□□ -1.66
UBS1	YBR165W	CBF2	P32504	956 aa		4.7	□□□□□ -1.66
UBS1	YBR165W	VPS24	P36095	224 aa	Known RBP	4.7	□□□□□ -1.66
UBS1	YBR165W	YER010C	P40011	234 aa		4.7	□□□□□ -1.66
UBS1	YBR165W	YJL070C	P40361	888 aa		4.7	□□□□□ -1.66
UBS1	YBR165W	YIL060W	P40519	144 aa		4.7	□□□□□ -1.66
UBS1	YBR165W	YIR014W	P40570	242 aa		4.7	□□□□□ -1.66
UBS1	YBR165W	ZDS2	P54786	942 aa		4.7	□□□□□ -1.66
UBS1	YBR165W	NUP100	Q02629	959 aa		4.7	□□□□□ -1.66
UBS1	YBR165W	ATG26	Q06321	1198 aa		4.7	□□□□□ -1.66
UBS1	YBR165W	INP53	Q12271	1107 aa		4.7	□□□□□ -1.66
UBS1	YBR165W	YOL087C	Q99247	1116 aa		4.7	□□□□□ -1.66
UBS1	YBR165W	YKL050C	P35736	922 aa		4.69	□□□□□ -1.66
UBS1	YBR165W	FMP46	P36141	133 aa	Known RBP	4.69	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 33.1 ms