RNA–Protein interactions for RNA: ENST00000616833.5

CLN5-203, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,527 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-203ENST00000616833 CD44P16070 742 aaKnown RBP24.88■■□□□ 1.57
CLN5-203ENST00000616833 MORC3Q14149 939 aa24.88■■□□□ 1.57
CLN5-203ENST00000616833 INF2Q27J81 1249 aa24.88■■□□□ 1.57
CLN5-203ENST00000616833 INTS13Q9NVM9 706 aa24.88■■□□□ 1.57
CLN5-203ENST00000616833 CDK5RAP2Q96SN8 1893 aa24.88■■□□□ 1.57
CLN5-203ENST00000616833 FRMPD2Q68DX3 1309 aaPredicted RBP24.88■■□□□ 1.57
CLN5-203ENST00000616833 KLRF2D3W0D1 207 aa24.88■■□□□ 1.57
CLN5-203ENST00000616833 CDK11BP21127 795 aaKnown RBP24.88■■□□□ 1.57
CLN5-203ENST00000616833 SARSP49591 514 aaKnown RBP24.88■■□□□ 1.57
CLN5-203ENST00000616833 ATP2C1P98194 919 aaPredicted RBP24.88■■□□□ 1.57
CLN5-203ENST00000616833 PRIMPOLQ96LW4 560 aa24.88■■□□□ 1.57
CLN5-203ENST00000616833 SNED1Q8TER0 1413 aa24.88■■□□□ 1.57
CLN5-203ENST00000616833 C15orf52Q6ZUT6 534 aaKnown RBP24.87■■□□□ 1.57
CLN5-203ENST00000616833 PCDHAC2Q9Y5I4 1007 aa24.87■■□□□ 1.57
CLN5-203ENST00000616833 SFPQP23246 707 aaKnown RBP eCLIP24.86■■□□□ 1.57
CLN5-203ENST00000616833 LRRC47Q8N1G4 583 aaKnown RBP24.86■■□□□ 1.57
CLN5-203ENST00000616833 OSBPL5Q9H0X9 879 aaPredicted RBP24.86■■□□□ 1.57
CLN5-203ENST00000616833 DDX4Q9NQI0 724 aaKnown RBP24.86■■□□□ 1.57
CLN5-203ENST00000616833 DDX60LQ5H9U9 1706 aaKnown RBP24.86■■□□□ 1.57
CLN5-203ENST00000616833 DYNC1I1O14576 645 aa24.86■■□□□ 1.57
CLN5-203ENST00000616833 HOXA10P31260 410 aaPredicted RBP24.86■■□□□ 1.57
CLN5-203ENST00000616833 C16orf86Q6ZW13 317 aa24.86■■□□□ 1.57
CLN5-203ENST00000616833 TMEM60Q9H2L4 133 aa24.86■■□□□ 1.57
CLN5-203ENST00000616833 PCDHA4Q9UN74 947 aa24.86■■□□□ 1.57
CLN5-203ENST00000616833 ROBO3Q96MS0 1386 aa24.86■■□□□ 1.57
CLN5-203ENST00000616833 PCDHA6Q9UN73 950 aa24.85■■□□□ 1.57
CLN5-203ENST00000616833 TTF2Q9UNY4 1162 aaKnown RBP24.85■■□□□ 1.57
CLN5-203ENST00000616833 PCDHA8Q9Y5H6 950 aa24.85■■□□□ 1.57
CLN5-203ENST00000616833 CCDC194A0A1B0GVG4 234 aa24.85■■□□□ 1.57
CLN5-203ENST00000616833 USP17L5A8MUK1 530 aa24.85■■□□□ 1.57
CLN5-203ENST00000616833 SLFN14P0C7P3 912 aa24.85■■□□□ 1.57
CLN5-203ENST00000616833 KARSQ15046 597 aaKnown RBP24.85■■□□□ 1.57
CLN5-203ENST00000616833 FERMT2Q96AC1 680 aa24.85■■□□□ 1.57
CLN5-203ENST00000616833 CRAMP1Q96RY5 1269 aa24.85■■□□□ 1.57
CLN5-203ENST00000616833 PODXL2Q9NZ53 605 aa24.85■■□□□ 1.57
CLN5-203ENST00000616833 MAPK8IP1Q9UQF2 711 aa24.85■■□□□ 1.57
CLN5-203ENST00000616833 APBA3O96018 575 aa24.84■■□□□ 1.57
CLN5-203ENST00000616833 CACNB3P54284 484 aa24.84■■□□□ 1.57
CLN5-203ENST00000616833 NAA30Q147X3 362 aaPredicted RBP24.84■■□□□ 1.57
CLN5-203ENST00000616833 ZNF622Q969S3 477 aaKnown RBP eCLIP24.84■■□□□ 1.57
CLN5-203ENST00000616833 ZC3H12CQ9C0D7 883 aaKnown RBP24.84■■□□□ 1.57
CLN5-203ENST00000616833 DBNDD1Q9H9R9 158 aa24.84■■□□□ 1.57
CLN5-203ENST00000616833 GSDMDP57764 484 aa24.84■■□□□ 1.57
CLN5-203ENST00000616833 PALM3A6NDB9 673 aaPredicted RBP24.83■■□□□ 1.57
CLN5-203ENST00000616833 STXBP3O00186 592 aa24.83■■□□□ 1.57
CLN5-203ENST00000616833 MMP10P09238 476 aa24.83■■□□□ 1.57
CLN5-203ENST00000616833 CUL4BQ13620 913 aa24.83■■□□□ 1.57
CLN5-203ENST00000616833 NT5DC1Q5TFE4 455 aa24.83■■□□□ 1.57
CLN5-203ENST00000616833 CREBRFQ8IUR6 639 aa24.83■■□□□ 1.57
CLN5-203ENST00000616833 CCAR2Q8N163 923 aaKnown RBP24.83■■□□□ 1.57
CLN5-203ENST00000616833 MTRQ99707 1265 aa24.83■■□□□ 1.57
CLN5-203ENST00000616833 DPYDQ12882 1025 aa24.83■■□□□ 1.57
CLN5-203ENST00000616833 CEP135Q66GS9 1140 aa24.83■■□□□ 1.57
CLN5-203ENST00000616833 E4F1Q66K89 784 aaPredicted RBP24.83■■□□□ 1.57
CLN5-203ENST00000616833 PIGSQ96S52 555 aa24.83■■□□□ 1.57
CLN5-203ENST00000616833 IMPACTQ9P2X3 320 aa24.83■■□□□ 1.57
CLN5-203ENST00000616833 MYH1P12882 1939 aa24.83■■□□□ 1.56
CLN5-203ENST00000616833 G3V3G9 751 aa24.82■■□□□ 1.56
CLN5-203ENST00000616833 NEMFO60524 1076 aa24.82■■□□□ 1.56
CLN5-203ENST00000616833 SRGNP10124 158 aa24.82■■□□□ 1.56
CLN5-203ENST00000616833 NAPAP54920 295 aa24.82■■□□□ 1.56
CLN5-203ENST00000616833 ATP2B2Q01814 1243 aa24.82■■□□□ 1.56
CLN5-203ENST00000616833 DCAF8Q5TAQ9 597 aa24.82■■□□□ 1.56
CLN5-203ENST00000616833 SP8Q8IXZ3 490 aa24.82■■□□□ 1.56
CLN5-203ENST00000616833 ANKS1AQ92625 1134 aa24.82■■□□□ 1.56
CLN5-203ENST00000616833 ATP6V0A2Q9Y487 856 aa24.82■■□□□ 1.56
CLN5-203ENST00000616833 FAM196BA6NMK8 535 aa24.82■■□□□ 1.56
CLN5-203ENST00000616833 PARP1P09874 1014 aaKnown RBP24.82■■□□□ 1.56
CLN5-203ENST00000616833 AKR1B1P15121 316 aa24.82■■□□□ 1.56
CLN5-203ENST00000616833 DPP8Q6V1X1 898 aaPredicted RBP24.82■■□□□ 1.56
CLN5-203ENST00000616833 ZNF710Q8N1W2 664 aa24.82■■□□□ 1.56
CLN5-203ENST00000616833 MLKLQ8NB16 471 aa24.82■■□□□ 1.56
CLN5-203ENST00000616833 TOP1P11387 765 aaKnown RBP24.81■■□□□ 1.56
CLN5-203ENST00000616833 CALML3P27482 149 aa24.81■■□□□ 1.56
CLN5-203ENST00000616833 RASSF8Q8NHQ8 419 aa24.81■■□□□ 1.56
CLN5-203ENST00000616833 ADAMTSL1Q8N6G6 1762 aa24.81■■□□□ 1.56
CLN5-203ENST00000616833 RAD21O60216 631 aa24.81■■□□□ 1.56
CLN5-203ENST00000616833 PTPN14Q15678 1187 aa24.81■■□□□ 1.56
CLN5-203ENST00000616833 KANK3Q6NY19 840 aa24.81■■□□□ 1.56
CLN5-203ENST00000616833 C4orf32Q8N8J7 132 aa24.81■■□□□ 1.56
CLN5-203ENST00000616833 NEDD1Q8NHV4 660 aa24.81■■□□□ 1.56
CLN5-203ENST00000616833 SHROOM1Q2M3G4 852 aaPredicted RBP24.8■■□□□ 1.56
CLN5-203ENST00000616833 SH3RF1Q7Z6J0 888 aa24.8■■□□□ 1.56
CLN5-203ENST00000616833 VSTM4Q8IW00 320 aa24.8■■□□□ 1.56
CLN5-203ENST00000616833 GPCPD1Q9NPB8 672 aa24.8■■□□□ 1.56
CLN5-203ENST00000616833 TCP11L1Q9NUJ3 509 aa24.8■■□□□ 1.56
CLN5-203ENST00000616833 USP40Q9NVE5 1235 aa24.8■■□□□ 1.56
CLN5-203ENST00000616833 TMEM260Q9NX78 707 aa24.8■■□□□ 1.56
CLN5-203ENST00000616833 BARHL2Q9NY43 387 aa24.8■■□□□ 1.56
CLN5-203ENST00000616833 GAKO14976 1311 aa24.8■■□□□ 1.56
CLN5-203ENST00000616833 ADKP55263 362 aaKnown RBP24.8■■□□□ 1.56
CLN5-203ENST00000616833 SPATA20Q8TB22 786 aa24.8■■□□□ 1.56
CLN5-203ENST00000616833 CTNND2Q9UQB3 1225 aa24.8■■□□□ 1.56
CLN5-203ENST00000616833 ANKRD31Q8N7Z5 1873 aa24.8■■□□□ 1.56
CLN5-203ENST00000616833 E2F4Q16254 413 aa24.79■■□□□ 1.56
CLN5-203ENST00000616833 LETM2Q2VYF4 491 aa24.79■■□□□ 1.56
CLN5-203ENST00000616833 ZFPM1Q8IX07 1006 aa24.79■■□□□ 1.56
CLN5-203ENST00000616833 CCDC150Q8NCX0 1101 aa24.79■■□□□ 1.56
CLN5-203ENST00000616833 TBC1D22AQ8WUA7 517 aa24.79■■□□□ 1.56
CLN5-203ENST00000616833 BIN2Q9UBW5 565 aaPredicted RBP24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms