RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 TEX33O43247 280 aa13.08□□□□□ -0.32
ARHGEF1-220ENST00000600274 ORC4O43929 436 aa13.08□□□□□ -0.32
ARHGEF1-220ENST00000600274 URI1O94763 535 aaPredicted RBP13.08□□□□□ -0.32
ARHGEF1-220ENST00000600274 TXLNAP40222 546 aa13.08□□□□□ -0.32
ARHGEF1-220ENST00000600274 UBA7P41226 1012 aa13.08□□□□□ -0.32
ARHGEF1-220ENST00000600274 CUL4BQ13620 913 aa13.08□□□□□ -0.32
ARHGEF1-220ENST00000600274 RBM17Q96I25 401 aaKnown RBP13.08□□□□□ -0.32
ARHGEF1-220ENST00000600274 PPP1R13BQ96KQ4 1090 aa13.08□□□□□ -0.32
ARHGEF1-220ENST00000600274 BIN2Q9UBW5 565 aaPredicted RBP13.08□□□□□ -0.32
ARHGEF1-220ENST00000600274 AHDC1Q5TGY3 1603 aaPredicted RBP13.08□□□□□ -0.32
ARHGEF1-220ENST00000600274 CD44P16070 742 aaKnown RBP13.08□□□□□ -0.32
ARHGEF1-220ENST00000600274 CDK8P49336 464 aa13.08□□□□□ -0.32
ARHGEF1-220ENST00000600274 PFKFB3Q16875 520 aaPredicted RBP13.08□□□□□ -0.32
ARHGEF1-220ENST00000600274 SOGA3Q5TF21 947 aa13.08□□□□□ -0.32
ARHGEF1-220ENST00000600274 SYNRGQ9UMZ2 1314 aa13.07□□□□□ -0.32
ARHGEF1-220ENST00000600274 TULP1O00294 542 aaPredicted RBP13.07□□□□□ -0.32
ARHGEF1-220ENST00000600274 MARCH6O60337 910 aa13.07□□□□□ -0.32
ARHGEF1-220ENST00000600274 WWC2Q6AWC2 1192 aa13.07□□□□□ -0.32
ARHGEF1-220ENST00000600274 FNBP4Q8N3X1 1017 aaPredicted RBP13.07□□□□□ -0.32
ARHGEF1-220ENST00000600274 ZC3H12CQ9C0D7 883 aaKnown RBP13.07□□□□□ -0.32
ARHGEF1-220ENST00000600274 CCNT1O60563 726 aaKnown RBP13.07□□□□□ -0.32
ARHGEF1-220ENST00000600274 PPP2R5BQ15173 497 aa13.07□□□□□ -0.32
ARHGEF1-220ENST00000600274 KANK3Q6NY19 840 aa13.07□□□□□ -0.32
ARHGEF1-220ENST00000600274 IQUBQ8NA54 791 aa13.07□□□□□ -0.32
ARHGEF1-220ENST00000600274 MLKLQ8NB16 471 aa13.07□□□□□ -0.32
ARHGEF1-220ENST00000600274 CEP95Q96GE4 821 aa13.07□□□□□ -0.32
ARHGEF1-220ENST00000600274 ZSWIM4Q9H7M6 989 aa13.07□□□□□ -0.32
ARHGEF1-220ENST00000600274 SEC63Q9UGP8 760 aaKnown RBP13.07□□□□□ -0.32
ARHGEF1-220ENST00000600274 GDAQ9Y2T3 454 aa13.07□□□□□ -0.32
ARHGEF1-220ENST00000600274 SLFN14P0C7P3 912 aa13.07□□□□□ -0.32
ARHGEF1-220ENST00000600274 CCDC96Q2M329 555 aa13.07□□□□□ -0.32
ARHGEF1-220ENST00000600274 BPIFA3Q9BQP9 254 aa13.07□□□□□ -0.32
ARHGEF1-220ENST00000600274 TMX4Q9H1E5 349 aaPredicted RBP13.07□□□□□ -0.32
ARHGEF1-220ENST00000600274 TTF2Q9UNY4 1162 aaKnown RBP13.07□□□□□ -0.32
ARHGEF1-220ENST00000600274 MYH13Q9UKX3 1938 aa13.07□□□□□ -0.32
ARHGEF1-220ENST00000600274 PARP1P09874 1014 aaKnown RBP13.06□□□□□ -0.32
ARHGEF1-220ENST00000600274 MDM2Q00987 491 aaPredicted RBP13.06□□□□□ -0.32
ARHGEF1-220ENST00000600274 DTHD1Q6ZMT9 781 aa13.06□□□□□ -0.32
ARHGEF1-220ENST00000600274 PPFIBP1Q86W92 1011 aa13.06□□□□□ -0.32
ARHGEF1-220ENST00000600274 KLHL34Q8N239 644 aa13.06□□□□□ -0.32
ARHGEF1-220ENST00000600274 COA7Q96BR5 231 aa13.06□□□□□ -0.32
ARHGEF1-220ENST00000600274 PIGSQ96S52 555 aa13.06□□□□□ -0.32
ARHGEF1-220ENST00000600274 TMEM60Q9H2L4 133 aa13.06□□□□□ -0.32
ARHGEF1-220ENST00000600274 DBNDD1Q9H9R9 158 aa13.06□□□□□ -0.32
ARHGEF1-220ENST00000600274 TAB2Q9NYJ8 693 aa13.06□□□□□ -0.32
ARHGEF1-220ENST00000600274 IMPACTQ9P2X3 320 aa13.06□□□□□ -0.32
ARHGEF1-220ENST00000600274 CYTH3O43739 400 aa13.06□□□□□ -0.32
ARHGEF1-220ENST00000600274 RASA1P20936 1047 aa13.06□□□□□ -0.32
ARHGEF1-220ENST00000600274 DDR1Q08345 913 aa13.06□□□□□ -0.32
ARHGEF1-220ENST00000600274 DPP8Q6V1X1 898 aaPredicted RBP13.06□□□□□ -0.32
ARHGEF1-220ENST00000600274 TBC1D16Q8TBP0 767 aa13.06□□□□□ -0.32
ARHGEF1-220ENST00000600274 LZTFL1Q9NQ48 299 aa13.06□□□□□ -0.32
ARHGEF1-220ENST00000600274 INTS13Q9NVM9 706 aa13.06□□□□□ -0.32
ARHGEF1-220ENST00000600274 DDX60Q8IY21 1712 aaKnown RBP13.06□□□□□ -0.32
ARHGEF1-220ENST00000600274 USP17L5A8MUK1 530 aa13.06□□□□□ -0.32
ARHGEF1-220ENST00000600274 N4BP3O15049 544 aa13.06□□□□□ -0.32
ARHGEF1-220ENST00000600274 CALML3P27482 149 aa13.06□□□□□ -0.32
ARHGEF1-220ENST00000600274 SLC16A2P36021 539 aa13.06□□□□□ -0.32
ARHGEF1-220ENST00000600274 MORC3Q14149 939 aa13.06□□□□□ -0.32
ARHGEF1-220ENST00000600274 MTF1Q14872 753 aa13.06□□□□□ -0.32
ARHGEF1-220ENST00000600274 ELF2Q15723 593 aa13.06□□□□□ -0.32
ARHGEF1-220ENST00000600274 NPY5RQ15761 445 aa13.06□□□□□ -0.32
ARHGEF1-220ENST00000600274 VSTM4Q8IW00 320 aa13.06□□□□□ -0.32
ARHGEF1-220ENST00000600274 FERMT2Q96AC1 680 aa13.06□□□□□ -0.32
ARHGEF1-220ENST00000600274 BAG1Q99933 345 aaPredicted RBP13.06□□□□□ -0.32
ARHGEF1-220ENST00000600274 OSBPL5Q9H0X9 879 aaPredicted RBP13.06□□□□□ -0.32
ARHGEF1-220ENST00000600274 SMCO2A6NFE2 343 aa13.05□□□□□ -0.32
ARHGEF1-220ENST00000600274 KIAA0825Q8IV33 1275 aa13.05□□□□□ -0.32
ARHGEF1-220ENST00000600274 TMEM260Q9NX78 707 aa13.05□□□□□ -0.32
ARHGEF1-220ENST00000600274 PAXBP1Q9Y5B6 917 aa13.05□□□□□ -0.32
ARHGEF1-220ENST00000600274 GNG11P61952 73 aa13.05□□□□□ -0.32
ARHGEF1-220ENST00000600274 IKQ13123 557 aaPredicted RBP13.05□□□□□ -0.32
ARHGEF1-220ENST00000600274 IL17AQ16552 155 aa13.05□□□□□ -0.32
ARHGEF1-220ENST00000600274 CCDC178Q5BJE1 867 aa13.05□□□□□ -0.32
ARHGEF1-220ENST00000600274 PCMTD1Q96MG8 357 aaPredicted RBP13.05□□□□□ -0.32
ARHGEF1-220ENST00000600274 MAD2L2Q9UI95 211 aa13.05□□□□□ -0.32
ARHGEF1-220ENST00000600274 C4AP0C0L4 1744 aa13.05□□□□□ -0.32
ARHGEF1-220ENST00000600274 C4BP0C0L5 1744 aa13.05□□□□□ -0.32
ARHGEF1-220ENST00000600274 FLT1P17948 1338 aa13.05□□□□□ -0.32
ARHGEF1-220ENST00000600274 TRIM49BA6NDI0 452 aa13.04□□□□□ -0.32
ARHGEF1-220ENST00000600274 SSBP05455 408 aaKnown RBP eCLIP13.04□□□□□ -0.32
ARHGEF1-220ENST00000600274 TXKP42681 527 aa13.04□□□□□ -0.32
ARHGEF1-220ENST00000600274 NCBP1Q09161 790 aaKnown RBP13.04□□□□□ -0.32
ARHGEF1-220ENST00000600274 IGSF22Q8N9C0 903 aa13.04□□□□□ -0.32
ARHGEF1-220ENST00000600274 MED15Q96RN5 788 aa13.04□□□□□ -0.32
ARHGEF1-220ENST00000600274 MTA3Q9BTC8 594 aa13.04□□□□□ -0.32
ARHGEF1-220ENST00000600274 RTFDC1Q9BY42 306 aaPredicted RBP13.04□□□□□ -0.32
ARHGEF1-220ENST00000600274 PCDHA4Q9UN74 947 aa13.04□□□□□ -0.32
ARHGEF1-220ENST00000600274 ATP2B4P23634 1241 aa13.04□□□□□ -0.32
ARHGEF1-220ENST00000600274 TECP42680 631 aa13.04□□□□□ -0.32
ARHGEF1-220ENST00000600274 TNNI2P48788 182 aa13.04□□□□□ -0.32
ARHGEF1-220ENST00000600274 SBK1Q52WX2 424 aa13.04□□□□□ -0.32
ARHGEF1-220ENST00000600274 SPECC1LQ69YQ0 1117 aa13.04□□□□□ -0.32
ARHGEF1-220ENST00000600274 GJA10Q969M2 543 aa13.04□□□□□ -0.32
ARHGEF1-220ENST00000600274 LRP5O75197 1615 aa13.04□□□□□ -0.32
ARHGEF1-220ENST00000600274 PPEF1O14829 653 aaPredicted RBP13.04□□□□□ -0.32
ARHGEF1-220ENST00000600274 PCP11498 1178 aaKnown RBP13.04□□□□□ -0.32
ARHGEF1-220ENST00000600274 ATP2C1P98194 919 aaPredicted RBP13.04□□□□□ -0.32
ARHGEF1-220ENST00000600274 DPYDQ12882 1025 aa13.04□□□□□ -0.32
ARHGEF1-220ENST00000600274 FILIP1LQ4L180 1135 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms