RNA–Protein interactions for RNA: ENST00000577422.5

CUEDC1-203, Transcript of CUE domain containing 1, humanhuman

TSL 3

Gene CUEDC1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-203ENST00000577422 ROBO3Q96MS0 1386 aa16.31■□□□□ 0.2
CUEDC1-203ENST00000577422 CNGA1P29973 690 aa16.31■□□□□ 0.2
CUEDC1-203ENST00000577422 SBK1Q52WX2 424 aa16.31■□□□□ 0.2
CUEDC1-203ENST00000577422 TSHZ3Q63HK5 1081 aa16.31■□□□□ 0.2
CUEDC1-203ENST00000577422 DCTPP1Q9H773 170 aa16.31■□□□□ 0.2
CUEDC1-203ENST00000577422 SH2D4AQ9H788 454 aa16.31■□□□□ 0.2
CUEDC1-203ENST00000577422 KANSL2Q9H9L4 492 aa16.31■□□□□ 0.2
CUEDC1-203ENST00000577422 EPB41L4AQ9HCS5 686 aaPredicted RBP16.31■□□□□ 0.2
CUEDC1-203ENST00000577422 ZNF214Q9UL59 606 aaPredicted RBP16.31■□□□□ 0.2
CUEDC1-203ENST00000577422 ZNFX1Q9P2E3 1918 aaKnown RBP16.31■□□□□ 0.2
CUEDC1-203ENST00000577422 SEPT4O43236 478 aa16.3■□□□□ 0.2
CUEDC1-203ENST00000577422 RASA1P20936 1047 aa16.3■□□□□ 0.2
CUEDC1-203ENST00000577422 MDM2Q00987 491 aaPredicted RBP16.3■□□□□ 0.2
CUEDC1-203ENST00000577422 PRAMEF19Q5SWL8 479 aa16.3■□□□□ 0.2
CUEDC1-203ENST00000577422 GJC2Q5T442 439 aaPredicted RBP16.3■□□□□ 0.2
CUEDC1-203ENST00000577422 ANO1Q5XXA6 986 aa16.3■□□□□ 0.2
CUEDC1-203ENST00000577422 Q7L0L9 218 aa16.3■□□□□ 0.2
CUEDC1-203ENST00000577422 NCAPG2Q86XI2 1143 aa16.3■□□□□ 0.2
CUEDC1-203ENST00000577422 KBTBD3Q8NAB2 608 aa16.3■□□□□ 0.2
CUEDC1-203ENST00000577422 UBE2OQ9C0C9 1292 aaKnown RBP16.3■□□□□ 0.2
CUEDC1-203ENST00000577422 ARPP21Q9UBL0 812 aaPredicted RBP16.3■□□□□ 0.2
CUEDC1-203ENST00000577422 VCANP13611 3396 aa16.29■□□□□ 0.2
CUEDC1-203ENST00000577422 IGKV6D-41A0A0C4DH26 115 aa16.29■□□□□ 0.2
CUEDC1-203ENST00000577422 VWA5AO00534 786 aa16.29■□□□□ 0.2
CUEDC1-203ENST00000577422 ATN1P54259 1190 aaPredicted RBP16.29■□□□□ 0.2
CUEDC1-203ENST00000577422 PLS1Q14651 629 aa16.29■□□□□ 0.2
CUEDC1-203ENST00000577422 SNX17Q15036 470 aa16.29■□□□□ 0.2
CUEDC1-203ENST00000577422 ZSCAN25Q6NSZ9 544 aa16.29■□□□□ 0.2
CUEDC1-203ENST00000577422 RIOX2Q8IUF8 465 aa16.29■□□□□ 0.2
CUEDC1-203ENST00000577422 PPP1R9AQ9ULJ8 1098 aa16.29■□□□□ 0.2
CUEDC1-203ENST00000577422 PRUNE2Q8WUY3 3088 aa16.28■□□□□ 0.2
CUEDC1-203ENST00000577422 RTP1P59025 263 aa16.28■□□□□ 0.2
CUEDC1-203ENST00000577422 FAM83BQ5T0W9 1011 aa16.28■□□□□ 0.2
CUEDC1-203ENST00000577422 GIMAP6Q6P9H5 292 aa16.28■□□□□ 0.2
CUEDC1-203ENST00000577422 PLXNA1Q9UIW2 1896 aa16.28■□□□□ 0.2
CUEDC1-203ENST00000577422 M0R2C6 588 aa16.27■□□□□ 0.2
CUEDC1-203ENST00000577422 SLC25A27O95847 323 aa16.27■□□□□ 0.2
CUEDC1-203ENST00000577422 PGK2P07205 417 aa16.27■□□□□ 0.2
CUEDC1-203ENST00000577422 FCER1AP12319 257 aa16.27■□□□□ 0.2
CUEDC1-203ENST00000577422 ZNF792Q3KQV3 632 aa16.27■□□□□ 0.2
CUEDC1-203ENST00000577422 FAM47AQ5JRC9 791 aa16.27■□□□□ 0.2
CUEDC1-203ENST00000577422 SLC39A5Q6ZMH5 540 aa16.27■□□□□ 0.2
CUEDC1-203ENST00000577422 AMOTL1Q8IY63 956 aa16.27■□□□□ 0.2
CUEDC1-203ENST00000577422 APPBP2Q92624 585 aa16.27■□□□□ 0.2
CUEDC1-203ENST00000577422 NUP88Q99567 741 aaPredicted RBP16.27■□□□□ 0.2
CUEDC1-203ENST00000577422 SPTBN5Q9NRC6 3674 aaKnown RBP16.27■□□□□ 0.19
CUEDC1-203ENST00000577422 RNF113AO15541 343 aaKnown RBP16.26■□□□□ 0.19
CUEDC1-203ENST00000577422 GPAA1O43292 621 aa16.26■□□□□ 0.19
CUEDC1-203ENST00000577422 TAL1P17542 331 aaPredicted RBP16.26■□□□□ 0.19
CUEDC1-203ENST00000577422 LRRC41Q15345 812 aa16.26■□□□□ 0.19
CUEDC1-203ENST00000577422 SAMD1Q6SPF0 538 aaPredicted RBP16.26■□□□□ 0.19
CUEDC1-203ENST00000577422 DEFB123Q8N688 67 aa16.26■□□□□ 0.19
CUEDC1-203ENST00000577422 PI4K2BQ8TCG2 481 aa16.26■□□□□ 0.19
CUEDC1-203ENST00000577422 DDRGK1Q96HY6 314 aa16.26■□□□□ 0.19
CUEDC1-203ENST00000577422 GOPCQ9HD26 462 aa16.26■□□□□ 0.19
CUEDC1-203ENST00000577422 MTMR10Q9NXD2 777 aa16.26■□□□□ 0.19
CUEDC1-203ENST00000577422 NYAP2Q9P242 653 aa16.26■□□□□ 0.19
CUEDC1-203ENST00000577422 RIPK3Q9Y572 518 aa16.26■□□□□ 0.19
CUEDC1-203ENST00000577422 SMCHD1A6NHR9 2005 aa16.25■□□□□ 0.19
CUEDC1-203ENST00000577422 F5H6K3 240 aa16.25■□□□□ 0.19
CUEDC1-203ENST00000577422 NDUFB10O96000 172 aa16.25■□□□□ 0.19
CUEDC1-203ENST00000577422 ZNF865P0CJ78 1059 aaPredicted RBP16.25■□□□□ 0.19
CUEDC1-203ENST00000577422 STAT3P40763 770 aa16.25■□□□□ 0.19
CUEDC1-203ENST00000577422 KLRC3Q07444 240 aa16.25■□□□□ 0.19
CUEDC1-203ENST00000577422 C1orf53Q5VUE5 145 aa16.25■□□□□ 0.19
CUEDC1-203ENST00000577422 STK11IPQ8N1F8 1099 aa16.25■□□□□ 0.19
CUEDC1-203ENST00000577422 ARRDC4Q8NCT1 418 aa16.25■□□□□ 0.19
CUEDC1-203ENST00000577422 OTUD7AQ8TE49 926 aaPredicted RBP16.25■□□□□ 0.19
CUEDC1-203ENST00000577422 SEC62Q99442 399 aaKnown RBP16.25■□□□□ 0.19
CUEDC1-203ENST00000577422 MMP19Q99542 508 aa16.25■□□□□ 0.19
CUEDC1-203ENST00000577422 TINF2Q9BSI4 451 aa16.25■□□□□ 0.19
CUEDC1-203ENST00000577422 SLC5A4Q9NY91 659 aa16.25■□□□□ 0.19
CUEDC1-203ENST00000577422 NRBP1Q9UHY1 535 aa16.25■□□□□ 0.19
CUEDC1-203ENST00000577422 DIS3Q9Y2L1 958 aaKnown RBP16.25■□□□□ 0.19
CUEDC1-203ENST00000577422 PCDHB15Q9Y5E8 787 aa16.25■□□□□ 0.19
CUEDC1-203ENST00000577422 MINDY4BA8MYZ0 360 aa16.24■□□□□ 0.19
CUEDC1-203ENST00000577422 POTEB2H3BUK9 544 aa16.24■□□□□ 0.19
CUEDC1-203ENST00000577422 ADCYAP1R1P41586 468 aa16.24■□□□□ 0.19
CUEDC1-203ENST00000577422 MKL1Q969V6 931 aa16.24■□□□□ 0.19
CUEDC1-203ENST00000577422 MYH4Q9Y623 1939 aa16.23■□□□□ 0.19
CUEDC1-203ENST00000577422 SALL3Q9BXA9 1300 aa16.23■□□□□ 0.19
CUEDC1-203ENST00000577422 DNAJC25-GNG10A0A024R161 153 aa16.23■□□□□ 0.19
CUEDC1-203ENST00000577422 ATP2A1O14983 1001 aa16.23■□□□□ 0.19
CUEDC1-203ENST00000577422 FOXP2O15409 715 aa16.23■□□□□ 0.19
CUEDC1-203ENST00000577422 PRDM1O75626 825 aa16.23■□□□□ 0.19
CUEDC1-203ENST00000577422 TRIM60Q495X7 471 aa16.23■□□□□ 0.19
CUEDC1-203ENST00000577422 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.23■□□□□ 0.19
CUEDC1-203ENST00000577422 SH3RF1Q7Z6J0 888 aa16.23■□□□□ 0.19
CUEDC1-203ENST00000577422 LENG1Q96BZ8 264 aaPredicted RBP16.23■□□□□ 0.19
CUEDC1-203ENST00000577422 SLF1Q9BQI6 1058 aa16.23■□□□□ 0.19
CUEDC1-203ENST00000577422 PDLIM7Q9NR12 457 aa16.23■□□□□ 0.19
CUEDC1-203ENST00000577422 ATP11BQ9Y2G3 1177 aa16.23■□□□□ 0.19
CUEDC1-203ENST00000577422 PLIN4Q96Q06 1357 aa16.23■□□□□ 0.19
CUEDC1-203ENST00000577422 TRIM43BA6NCK2 446 aa16.22■□□□□ 0.19
CUEDC1-203ENST00000577422 PATL2C9JE40 543 aaKnown RBP16.22■□□□□ 0.19
CUEDC1-203ENST00000577422 KBTBD13C9JR72 458 aa16.22■□□□□ 0.19
CUEDC1-203ENST00000577422 ADAMTS4O75173 837 aa16.22■□□□□ 0.19
CUEDC1-203ENST00000577422 ZFYP08048 801 aaPredicted RBP16.22■□□□□ 0.19
CUEDC1-203ENST00000577422 ITGB8P26012 769 aa16.22■□□□□ 0.19
CUEDC1-203ENST00000577422 KCTD2Q14681 263 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms