RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 KIAA1755Q5JYT7 1200 aa16.24■□□□□ 0.19
SMAD3-214ENST00000560402 CTR9Q6PD62 1173 aa16.24■□□□□ 0.19
SMAD3-214ENST00000560402 NCAPG2Q86XI2 1143 aa16.24■□□□□ 0.19
SMAD3-214ENST00000560402 SIAH1Q8IUQ4 282 aa16.24■□□□□ 0.19
SMAD3-214ENST00000560402 TDHQ8IZJ6 230 aa16.24■□□□□ 0.19
SMAD3-214ENST00000560402 PUS7LQ9H0K6 701 aaKnown RBP16.24■□□□□ 0.19
SMAD3-214ENST00000560402 CYP2D7A0A087X1C5 515 aa16.23■□□□□ 0.19
SMAD3-214ENST00000560402 EEF2P13639 858 aaKnown RBP16.23■□□□□ 0.19
SMAD3-214ENST00000560402 SYN1P17600 705 aa16.23■□□□□ 0.19
SMAD3-214ENST00000560402 PLS1Q14651 629 aa16.23■□□□□ 0.19
SMAD3-214ENST00000560402 LRRFIP1Q32MZ4 808 aaKnown RBP16.23■□□□□ 0.19
SMAD3-214ENST00000560402 LRIT3Q3SXY7 679 aa16.23■□□□□ 0.19
SMAD3-214ENST00000560402 SPICE1Q8N0Z3 855 aa16.23■□□□□ 0.19
SMAD3-214ENST00000560402 APPBP2Q92624 585 aa16.23■□□□□ 0.19
SMAD3-214ENST00000560402 TSHZ2Q9NRE2 1034 aa16.23■□□□□ 0.19
SMAD3-214ENST00000560402 SOX1O00570 391 aaPredicted RBP16.22■□□□□ 0.19
SMAD3-214ENST00000560402 SEPT4O43236 478 aa16.22■□□□□ 0.19
SMAD3-214ENST00000560402 SMARCA5O60264 1052 aaPredicted RBP16.22■□□□□ 0.19
SMAD3-214ENST00000560402 CHGBP05060 677 aa16.22■□□□□ 0.19
SMAD3-214ENST00000560402 FCER1AP12319 257 aa16.22■□□□□ 0.19
SMAD3-214ENST00000560402 GNAT2P19087 354 aa16.22■□□□□ 0.19
SMAD3-214ENST00000560402 STRBPQ96SI9 672 aaKnown RBP16.22■□□□□ 0.19
SMAD3-214ENST00000560402 UBE2OQ9C0C9 1292 aaKnown RBP16.22■□□□□ 0.19
SMAD3-214ENST00000560402 DCTPP1Q9H773 170 aa16.22■□□□□ 0.19
SMAD3-214ENST00000560402 NRBP1Q9UHY1 535 aa16.22■□□□□ 0.19
SMAD3-214ENST00000560402 PPP1R9AQ9ULJ8 1098 aa16.22■□□□□ 0.19
SMAD3-214ENST00000560402 ADAMTS5Q9UNA0 930 aa16.22■□□□□ 0.19
SMAD3-214ENST00000560402 DNAH12Q6ZR08 3092 aa16.22■□□□□ 0.19
SMAD3-214ENST00000560402 KBTBD13C9JR72 458 aa16.21■□□□□ 0.19
SMAD3-214ENST00000560402 TMEM132BQ14DG7 1078 aa16.21■□□□□ 0.19
SMAD3-214ENST00000560402 RIOX2Q8IUF8 465 aa16.21■□□□□ 0.19
SMAD3-214ENST00000560402 ARRDC4Q8NCT1 418 aa16.21■□□□□ 0.19
SMAD3-214ENST00000560402 TRPV1Q8NER1 839 aa16.21■□□□□ 0.19
SMAD3-214ENST00000560402 LRCH3Q96II8 777 aa16.21■□□□□ 0.19
SMAD3-214ENST00000560402 MAML3Q96JK9 1138 aa16.21■□□□□ 0.19
SMAD3-214ENST00000560402 ZNF287Q9HBT7 754 aa16.21■□□□□ 0.19
SMAD3-214ENST00000560402 COBLO75128 1261 aa16.2■□□□□ 0.18
SMAD3-214ENST00000560402 MMP19Q99542 508 aa16.2■□□□□ 0.18
SMAD3-214ENST00000560402 SENP6Q9GZR1 1112 aaPredicted RBP16.2■□□□□ 0.18
SMAD3-214ENST00000560402 NYAP2Q9P242 653 aa16.2■□□□□ 0.18
SMAD3-214ENST00000560402 SYNPO2Q9UMS6 1093 aa16.2■□□□□ 0.18
SMAD3-214ENST00000560402 DIS3Q9Y2L1 958 aaKnown RBP16.2■□□□□ 0.18
SMAD3-214ENST00000560402 TTC41PQ6P2S7 1318 aa16.19■□□□□ 0.18
SMAD3-214ENST00000560402 PLIN4Q96Q06 1357 aa16.19■□□□□ 0.18
SMAD3-214ENST00000560402 GSG1L2A8MUP6 293 aa16.19■□□□□ 0.18
SMAD3-214ENST00000560402 SMIM22K7EJ46 135 aa16.19■□□□□ 0.18
SMAD3-214ENST00000560402 VWA5AO00534 786 aa16.19■□□□□ 0.18
SMAD3-214ENST00000560402 ERC2O15083 957 aa16.19■□□□□ 0.18
SMAD3-214ENST00000560402 RNF113AO15541 343 aaKnown RBP16.19■□□□□ 0.18
SMAD3-214ENST00000560402 GPAA1O43292 621 aa16.19■□□□□ 0.18
SMAD3-214ENST00000560402 RASA1P20936 1047 aa16.19■□□□□ 0.18
SMAD3-214ENST00000560402 KCTD2Q14681 263 aa16.19■□□□□ 0.18
SMAD3-214ENST00000560402 OSBP2Q969R2 916 aa16.19■□□□□ 0.18
SMAD3-214ENST00000560402 MKNK2Q9HBH9 465 aa16.19■□□□□ 0.18
SMAD3-214ENST00000560402 FBXO28Q9NVF7 368 aa16.19■□□□□ 0.18
SMAD3-214ENST00000560402 PRKAG2Q9UGJ0 569 aa16.19■□□□□ 0.18
SMAD3-214ENST00000560402 ZNF214Q9UL59 606 aaPredicted RBP16.19■□□□□ 0.18
SMAD3-214ENST00000560402 STAT3P40763 770 aa16.18■□□□□ 0.18
SMAD3-214ENST00000560402 TDO2P48775 406 aa16.18■□□□□ 0.18
SMAD3-214ENST00000560402 FAM83BQ5T0W9 1011 aa16.18■□□□□ 0.18
SMAD3-214ENST00000560402 SAMD1Q6SPF0 538 aaPredicted RBP16.18■□□□□ 0.18
SMAD3-214ENST00000560402 REPS2Q8NFH8 660 aa16.18■□□□□ 0.18
SMAD3-214ENST00000560402 LBHD1Q9BQE6 289 aaPredicted RBP16.18■□□□□ 0.18
SMAD3-214ENST00000560402 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.18■□□□□ 0.18
SMAD3-214ENST00000560402 TEX13BQ9BXU2 312 aa16.18■□□□□ 0.18
SMAD3-214ENST00000560402 RAD21O60216 631 aa16.17■□□□□ 0.18
SMAD3-214ENST00000560402 RTP1P59025 263 aa16.17■□□□□ 0.18
SMAD3-214ENST00000560402 SLF1Q9BQI6 1058 aa16.17■□□□□ 0.18
SMAD3-214ENST00000560402 EPB41L4AQ9HCS5 686 aaPredicted RBP16.17■□□□□ 0.18
SMAD3-214ENST00000560402 IGKV6D-41A0A0C4DH26 115 aa16.16■□□□□ 0.18
SMAD3-214ENST00000560402 MINDY4BA8MYZ0 360 aa16.16■□□□□ 0.18
SMAD3-214ENST00000560402 ATN1P54259 1190 aaPredicted RBP16.16■□□□□ 0.18
SMAD3-214ENST00000560402 SNX17Q15036 470 aa16.16■□□□□ 0.18
SMAD3-214ENST00000560402 ZNF792Q3KQV3 632 aa16.16■□□□□ 0.18
SMAD3-214ENST00000560402 GJC2Q5T442 439 aaPredicted RBP16.16■□□□□ 0.18
SMAD3-214ENST00000560402 MSL3Q8N5Y2 521 aaKnown RBP16.16■□□□□ 0.18
SMAD3-214ENST00000560402 TINF2Q9BSI4 451 aa16.16■□□□□ 0.18
SMAD3-214ENST00000560402 NACAP1Q9BZK3 213 aa16.16■□□□□ 0.18
SMAD3-214ENST00000560402 SMCHD1A6NHR9 2005 aa16.16■□□□□ 0.18
SMAD3-214ENST00000560402 F5H6K3 240 aa16.15■□□□□ 0.18
SMAD3-214ENST00000560402 ATP2A1O14983 1001 aa16.15■□□□□ 0.18
SMAD3-214ENST00000560402 NDUFB10O96000 172 aa16.15■□□□□ 0.18
SMAD3-214ENST00000560402 RARBP10826 455 aa16.15■□□□□ 0.18
SMAD3-214ENST00000560402 MDM2Q00987 491 aaPredicted RBP16.15■□□□□ 0.18
SMAD3-214ENST00000560402 KLRC3Q07444 240 aa16.15■□□□□ 0.18
SMAD3-214ENST00000560402 LRRC41Q15345 812 aa16.15■□□□□ 0.18
SMAD3-214ENST00000560402 FAM47AQ5JRC9 791 aa16.15■□□□□ 0.18
SMAD3-214ENST00000560402 C1orf53Q5VUE5 145 aa16.15■□□□□ 0.18
SMAD3-214ENST00000560402 TSHZ3Q63HK5 1081 aa16.15■□□□□ 0.18
SMAD3-214ENST00000560402 SLC39A5Q6ZMH5 540 aa16.15■□□□□ 0.18
SMAD3-214ENST00000560402 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.15■□□□□ 0.18
SMAD3-214ENST00000560402 PRPF38AQ8NAV1 312 aaKnown RBP16.15■□□□□ 0.18
SMAD3-214ENST00000560402 RWDD1Q9H446 243 aaPredicted RBP16.15■□□□□ 0.18
SMAD3-214ENST00000560402 M0R2C6 588 aa16.14■□□□□ 0.17
SMAD3-214ENST00000560402 SLC3A2P08195 630 aaKnown RBP16.14■□□□□ 0.17
SMAD3-214ENST00000560402 AKR1A1P14550 325 aa16.14■□□□□ 0.17
SMAD3-214ENST00000560402 PDE4BQ07343 736 aa16.14■□□□□ 0.17
SMAD3-214ENST00000560402 PPP4R3BQ5MIZ7 849 aa16.14■□□□□ 0.17
SMAD3-214ENST00000560402 ANO1Q5XXA6 986 aa16.14■□□□□ 0.17
SMAD3-214ENST00000560402 SNRNP48Q6IEG0 339 aaKnown RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms