RNA–Protein interactions for RNA: ENST00000537619.6

PTPRR-205, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best)

Gene PTPRR, Length 1,927 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-205ENST00000537619 SLFN14P0C7P3 912 aa10.63□□□□□ -0.71
PTPRR-205ENST00000537619 GOLGA8HP0CJ92 632 aa10.63□□□□□ -0.71
PTPRR-205ENST00000537619 CD44P16070 742 aaKnown RBP10.63□□□□□ -0.71
PTPRR-205ENST00000537619 ZNF18P17022 549 aa10.63□□□□□ -0.71
PTPRR-205ENST00000537619 MCM7P33993 719 aa10.63□□□□□ -0.71
PTPRR-205ENST00000537619 AFMP43652 599 aa10.63□□□□□ -0.71
PTPRR-205ENST00000537619 NT5C2P49902 561 aa10.63□□□□□ -0.71
PTPRR-205ENST00000537619 GTF2IP78347 998 aa10.63□□□□□ -0.71
PTPRR-205ENST00000537619 HSP90AA4PQ58FG1 418 aa10.63□□□□□ -0.71
PTPRR-205ENST00000537619 COL23A1Q86Y22 540 aaPredicted RBP10.63□□□□□ -0.71
PTPRR-205ENST00000537619 SP8Q8IXZ3 490 aa10.63□□□□□ -0.71
PTPRR-205ENST00000537619 ZNF444Q8N0Y2 327 aaPredicted RBP10.63□□□□□ -0.71
PTPRR-205ENST00000537619 AKT1S1Q96B36 256 aa10.63□□□□□ -0.71
PTPRR-205ENST00000537619 DDX4Q9NQI0 724 aaKnown RBP10.63□□□□□ -0.71
PTPRR-205ENST00000537619 MYH1P12882 1939 aa10.63□□□□□ -0.71
PTPRR-205ENST00000537619 TRAPPC10P48553 1259 aa10.62□□□□□ -0.71
PTPRR-205ENST00000537619 NOVP48745 357 aa10.62□□□□□ -0.71
PTPRR-205ENST00000537619 GSDMDP57764 484 aa10.62□□□□□ -0.71
PTPRR-205ENST00000537619 TPM4P67936 248 aa10.62□□□□□ -0.71
PTPRR-205ENST00000537619 GOLGA8FQ08AF8 430 aa10.62□□□□□ -0.71
PTPRR-205ENST00000537619 GOLGA8DPQ0D2H9 430 aa10.62□□□□□ -0.71
PTPRR-205ENST00000537619 DPYDQ12882 1025 aa10.62□□□□□ -0.71
PTPRR-205ENST00000537619 NEDD1Q8NHV4 660 aa10.62□□□□□ -0.71
PTPRR-205ENST00000537619 MTRQ99707 1265 aa10.62□□□□□ -0.71
PTPRR-205ENST00000537619 SH3GLB2Q9NR46 395 aa10.62□□□□□ -0.71
PTPRR-205ENST00000537619 PCDHA4Q9UN74 947 aa10.62□□□□□ -0.71
PTPRR-205ENST00000537619 STX8Q9UNK0 236 aa10.62□□□□□ -0.71
PTPRR-205ENST00000537619 ATP6V0A2Q9Y487 856 aa10.62□□□□□ -0.71
PTPRR-205ENST00000537619 QSER1Q2KHR3 1735 aa10.62□□□□□ -0.71
PTPRR-205ENST00000537619 SRGNP10124 158 aa10.62□□□□□ -0.71
PTPRR-205ENST00000537619 TNNT1P13805 278 aa10.62□□□□□ -0.71
PTPRR-205ENST00000537619 UBASH3AP57075 661 aa10.62□□□□□ -0.71
PTPRR-205ENST00000537619 PDXDC2PQ6P474 469 aa10.62□□□□□ -0.71
PTPRR-205ENST00000537619 AMOTL1Q8IY63 956 aa10.62□□□□□ -0.71
PTPRR-205ENST00000537619 ZNF710Q8N1W2 664 aa10.62□□□□□ -0.71
PTPRR-205ENST00000537619 TRIML1Q8N9V2 468 aa10.62□□□□□ -0.71
PTPRR-205ENST00000537619 MLKLQ8NB16 471 aa10.62□□□□□ -0.71
PTPRR-205ENST00000537619 DAGLBQ8NCG7 672 aa10.62□□□□□ -0.71
PTPRR-205ENST00000537619 TBC1D22AQ8WUA7 517 aa10.62□□□□□ -0.71
PTPRR-205ENST00000537619 STAMQ92783 540 aa10.62□□□□□ -0.71
PTPRR-205ENST00000537619 CEP95Q96GE4 821 aa10.62□□□□□ -0.71
PTPRR-205ENST00000537619 TMEM60Q9H2L4 133 aa10.62□□□□□ -0.71
PTPRR-205ENST00000537619 HOOK1Q9UJC3 728 aaKnown RBP10.62□□□□□ -0.71
PTPRR-205ENST00000537619 PCDHA6Q9UN73 950 aa10.62□□□□□ -0.71
PTPRR-205ENST00000537619 NFE2L3Q9Y4A8 694 aa10.62□□□□□ -0.71
PTPRR-205ENST00000537619 PCDHA8Q9Y5H6 950 aa10.62□□□□□ -0.71
PTPRR-205ENST00000537619 PLCG2P16885 1265 aa10.61□□□□□ -0.71
PTPRR-205ENST00000537619 CALML3P27482 149 aa10.61□□□□□ -0.71
PTPRR-205ENST00000537619 GNAQP50148 359 aa10.61□□□□□ -0.71
PTPRR-205ENST00000537619 GABPAQ06546 454 aa10.61□□□□□ -0.71
PTPRR-205ENST00000537619 CUL4BQ13620 913 aa10.61□□□□□ -0.71
PTPRR-205ENST00000537619 TPD52L1Q16890 204 aaPredicted RBP10.61□□□□□ -0.71
PTPRR-205ENST00000537619 CCDC178Q5BJE1 867 aa10.61□□□□□ -0.71
PTPRR-205ENST00000537619 E4F1Q66K89 784 aaPredicted RBP10.61□□□□□ -0.71
PTPRR-205ENST00000537619 KANK3Q6NY19 840 aa10.61□□□□□ -0.71
PTPRR-205ENST00000537619 USP17L2Q6R6M4 530 aa10.61□□□□□ -0.71
PTPRR-205ENST00000537619 NYAP1Q6ZVC0 841 aa10.61□□□□□ -0.71
PTPRR-205ENST00000537619 HEATR3Q7Z4Q2 680 aa10.61□□□□□ -0.71
PTPRR-205ENST00000537619 CERS3Q8IU89 383 aa10.61□□□□□ -0.71
PTPRR-205ENST00000537619 VSTM4Q8IW00 320 aa10.61□□□□□ -0.71
PTPRR-205ENST00000537619 CCAR2Q8N163 923 aaKnown RBP10.61□□□□□ -0.71
PTPRR-205ENST00000537619 CCDC150Q8NCX0 1101 aa10.61□□□□□ -0.71
PTPRR-205ENST00000537619 ENOX1Q8TC92 643 aaKnown RBP10.61□□□□□ -0.71
PTPRR-205ENST00000537619 KCND1Q9NSA2 647 aa10.61□□□□□ -0.71
PTPRR-205ENST00000537619 SAMSN1Q9NSI8 373 aaKnown RBP10.61□□□□□ -0.71
PTPRR-205ENST00000537619 TRMT1Q9NXH9 659 aaKnown RBP10.61□□□□□ -0.71
PTPRR-205ENST00000537619 BARHL2Q9NY43 387 aa10.61□□□□□ -0.71
PTPRR-205ENST00000537619 KLRF2D3W0D1 207 aa10.6□□□□□ -0.71
PTPRR-205ENST00000537619 F8W031 263 aaPredicted RBP10.6□□□□□ -0.71
PTPRR-205ENST00000537619 SERPINC1P01008 464 aa10.6□□□□□ -0.71
PTPRR-205ENST00000537619 SLURP2P0DP57 97 aa10.6□□□□□ -0.71
PTPRR-205ENST00000537619 DOK7Q18PE1 504 aa10.6□□□□□ -0.71
PTPRR-205ENST00000537619 CLEC10AQ8IUN9 316 aa10.6□□□□□ -0.71
PTPRR-205ENST00000537619 SMYD4Q8IYR2 804 aaPredicted RBP10.6□□□□□ -0.71
PTPRR-205ENST00000537619 LRRC15Q8TF66 581 aa10.6□□□□□ -0.71
PTPRR-205ENST00000537619 SPZ1Q9BXG8 430 aa10.6□□□□□ -0.71
PTPRR-205ENST00000537619 COA1Q9GZY4 146 aa10.6□□□□□ -0.71
PTPRR-205ENST00000537619 PLIN4Q96Q06 1357 aa10.6□□□□□ -0.71
PTPRR-205ENST00000537619 IGKV6D-41A0A0C4DH26 115 aa10.6□□□□□ -0.71
PTPRR-205ENST00000537619 PP2D1A8MPX8 630 aa10.6□□□□□ -0.71
PTPRR-205ENST00000537619 USP17L5A8MUK1 530 aa10.6□□□□□ -0.71
PTPRR-205ENST00000537619 PPP1R3GB7ZBB8 358 aa10.6□□□□□ -0.71
PTPRR-205ENST00000537619 CDC25AP30304 524 aa10.6□□□□□ -0.71
PTPRR-205ENST00000537619 PICALMQ13492 652 aa10.6□□□□□ -0.71
PTPRR-205ENST00000537619 INF2Q27J81 1249 aa10.6□□□□□ -0.71
PTPRR-205ENST00000537619 CFAP100Q494V2 611 aa10.6□□□□□ -0.71
PTPRR-205ENST00000537619 APTXQ7Z2E3 356 aaKnown RBP10.6□□□□□ -0.71
PTPRR-205ENST00000537619 TMC4Q7Z404 712 aa10.6□□□□□ -0.71
PTPRR-205ENST00000537619 BLZF1Q9H2G9 400 aa10.6□□□□□ -0.71
PTPRR-205ENST00000537619 CBFA2T2O43439 604 aa10.59□□□□□ -0.71
PTPRR-205ENST00000537619 MYO1BO43795 1136 aa10.59□□□□□ -0.71
PTPRR-205ENST00000537619 AKR1B1P15121 316 aa10.59□□□□□ -0.71
PTPRR-205ENST00000537619 NPR1P16066 1061 aa10.59□□□□□ -0.71
PTPRR-205ENST00000537619 SFPQP23246 707 aaKnown RBP eCLIP10.59□□□□□ -0.71
PTPRR-205ENST00000537619 TBX2Q13207 712 aaPredicted RBP10.59□□□□□ -0.71
PTPRR-205ENST00000537619 TMEM139Q8IV31 216 aa10.59□□□□□ -0.71
PTPRR-205ENST00000537619 TMX1Q9H3N1 280 aa10.59□□□□□ -0.71
PTPRR-205ENST00000537619 COBLO75128 1261 aa10.58□□□□□ -0.72
PTPRR-205ENST00000537619 PARP1P09874 1014 aaKnown RBP10.58□□□□□ -0.72
PTPRR-205ENST00000537619 TOP1P11387 765 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms