RNA–Protein interactions for RNA: ENST00000486524.1

SLX4-203, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 2

Gene SLX4, Length 3,075 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-203ENST00000486524 NYAP1Q6ZVC0 841 aa12.8□□□□□ -0.36
SLX4-203ENST00000486524 HOMER1Q86YM7 354 aa12.8□□□□□ -0.36
SLX4-203ENST00000486524 VSTM4Q8IW00 320 aa12.8□□□□□ -0.36
SLX4-203ENST00000486524 CCDC34Q96HJ3 373 aa12.8□□□□□ -0.36
SLX4-203ENST00000486524 CYTH3O43739 400 aa12.8□□□□□ -0.36
SLX4-203ENST00000486524 HSPA1LP34931 641 aa12.8□□□□□ -0.36
SLX4-203ENST00000486524 PPP4CP60510 307 aa12.8□□□□□ -0.36
SLX4-203ENST00000486524 PICALMQ13492 652 aa12.8□□□□□ -0.36
SLX4-203ENST00000486524 GRM4Q14833 912 aa12.8□□□□□ -0.36
SLX4-203ENST00000486524 CRY2Q49AN0 593 aa12.8□□□□□ -0.36
SLX4-203ENST00000486524 TBC1D16Q8TBP0 767 aa12.8□□□□□ -0.36
SLX4-203ENST00000486524 EYA3Q99504 573 aa12.8□□□□□ -0.36
SLX4-203ENST00000486524 VAT1LQ9HCJ6 419 aa12.8□□□□□ -0.36
SLX4-203ENST00000486524 PAXBP1Q9Y5B6 917 aa12.8□□□□□ -0.36
SLX4-203ENST00000486524 CD44P16070 742 aaKnown RBP12.8□□□□□ -0.36
SLX4-203ENST00000486524 CDK8P49336 464 aa12.8□□□□□ -0.36
SLX4-203ENST00000486524 GTF2IP78347 998 aa12.8□□□□□ -0.36
SLX4-203ENST00000486524 WWC2Q6AWC2 1192 aa12.8□□□□□ -0.36
SLX4-203ENST00000486524 PPP1R13BQ96KQ4 1090 aa12.8□□□□□ -0.36
SLX4-203ENST00000486524 TRPC5Q9UL62 973 aaPredicted RBP12.8□□□□□ -0.36
SLX4-203ENST00000486524 CCDC194A0A1B0GVG4 234 aa12.79□□□□□ -0.36
SLX4-203ENST00000486524 CALML3P27482 149 aa12.79□□□□□ -0.36
SLX4-203ENST00000486524 PCDHA4Q9UN74 947 aa12.79□□□□□ -0.36
SLX4-203ENST00000486524 FLT1P17948 1338 aa12.79□□□□□ -0.36
SLX4-203ENST00000486524 INF2Q27J81 1249 aa12.79□□□□□ -0.36
SLX4-203ENST00000486524 USP17L2Q6R6M4 530 aa12.79□□□□□ -0.36
SLX4-203ENST00000486524 TRIML1Q8N9V2 468 aa12.79□□□□□ -0.36
SLX4-203ENST00000486524 RASSF8Q8NHQ8 419 aa12.79□□□□□ -0.36
SLX4-203ENST00000486524 SPATA20Q8TB22 786 aa12.79□□□□□ -0.36
SLX4-203ENST00000486524 ENOX1Q8TC92 643 aaKnown RBP12.79□□□□□ -0.36
SLX4-203ENST00000486524 CERKQ8TCT0 537 aa12.79□□□□□ -0.36
SLX4-203ENST00000486524 KLRF2D3W0D1 207 aa12.78□□□□□ -0.36
SLX4-203ENST00000486524 DPYDQ12882 1025 aa12.78□□□□□ -0.36
SLX4-203ENST00000486524 TMED8Q6PL24 325 aaPredicted RBP12.78□□□□□ -0.36
SLX4-203ENST00000486524 CREBRFQ8IUR6 639 aa12.78□□□□□ -0.36
SLX4-203ENST00000486524 PLIN2Q99541 437 aa12.78□□□□□ -0.36
SLX4-203ENST00000486524 QTRT2Q9H974 415 aaKnown RBP12.78□□□□□ -0.36
SLX4-203ENST00000486524 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.78□□□□□ -0.36
SLX4-203ENST00000486524 V9GYY5 206 aaPredicted RBP12.78□□□□□ -0.36
SLX4-203ENST00000486524 NAV1Q8NEY1 1877 aa12.78□□□□□ -0.36
SLX4-203ENST00000486524 GPR75-ASB3A0A0A6YYF3 556 aa12.78□□□□□ -0.36
SLX4-203ENST00000486524 IL1R1P14778 569 aa12.78□□□□□ -0.36
SLX4-203ENST00000486524 ADKP55263 362 aaKnown RBP12.78□□□□□ -0.36
SLX4-203ENST00000486524 ROBO3Q96MS0 1386 aa12.78□□□□□ -0.36
SLX4-203ENST00000486524 SYNRGQ9UMZ2 1314 aa12.78□□□□□ -0.36
SLX4-203ENST00000486524 PP2D1A8MPX8 630 aa12.77□□□□□ -0.36
SLX4-203ENST00000486524 BBOX1O75936 387 aa12.77□□□□□ -0.36
SLX4-203ENST00000486524 ZNF18P17022 549 aa12.77□□□□□ -0.36
SLX4-203ENST00000486524 EIF6P56537 245 aaKnown RBP12.77□□□□□ -0.36
SLX4-203ENST00000486524 CUL4BQ13620 913 aa12.77□□□□□ -0.36
SLX4-203ENST00000486524 KARSQ15046 597 aaKnown RBP12.77□□□□□ -0.36
SLX4-203ENST00000486524 SH3RF1Q7Z6J0 888 aa12.77□□□□□ -0.36
SLX4-203ENST00000486524 IQUBQ8NA54 791 aa12.77□□□□□ -0.36
SLX4-203ENST00000486524 MAP7D2Q96T17 732 aa12.77□□□□□ -0.36
SLX4-203ENST00000486524 MXD3Q9BW11 206 aa12.77□□□□□ -0.36
SLX4-203ENST00000486524 PCDHA6Q9UN73 950 aa12.77□□□□□ -0.36
SLX4-203ENST00000486524 PCDHA8Q9Y5H6 950 aa12.77□□□□□ -0.36
SLX4-203ENST00000486524 POLRMTO00411 1230 aaKnown RBP12.77□□□□□ -0.37
SLX4-203ENST00000486524 CTIFO43310 598 aaKnown RBP12.77□□□□□ -0.37
SLX4-203ENST00000486524 TRAPPC10P48553 1259 aa12.77□□□□□ -0.37
SLX4-203ENST00000486524 GNAQP50148 359 aa12.77□□□□□ -0.37
SLX4-203ENST00000486524 SYT10Q6XYQ8 523 aa12.77□□□□□ -0.37
SLX4-203ENST00000486524 C15orf52Q6ZUT6 534 aaKnown RBP12.77□□□□□ -0.37
SLX4-203ENST00000486524 KIF18AQ8NI77 898 aa12.77□□□□□ -0.37
SLX4-203ENST00000486524 CEP95Q96GE4 821 aa12.77□□□□□ -0.37
SLX4-203ENST00000486524 CTNND2Q9UQB3 1225 aa12.77□□□□□ -0.37
SLX4-203ENST00000486524 MAPK8IP1Q9UQF2 711 aa12.77□□□□□ -0.37
SLX4-203ENST00000486524 ANKS1AQ92625 1134 aa12.77□□□□□ -0.37
SLX4-203ENST00000486524 ZNF287Q9HBT7 754 aa12.77□□□□□ -0.37
SLX4-203ENST00000486524 UBR3Q6ZT12 1888 aa12.76□□□□□ -0.37
SLX4-203ENST00000486524 STXBP3O00186 592 aa12.76□□□□□ -0.37
SLX4-203ENST00000486524 PPEF1O14829 653 aaPredicted RBP12.76□□□□□ -0.37
SLX4-203ENST00000486524 ONECUT3O60422 494 aaPredicted RBP12.76□□□□□ -0.37
SLX4-203ENST00000486524 NAPAP54920 295 aa12.76□□□□□ -0.37
SLX4-203ENST00000486524 RHBDL3P58872 404 aa12.76□□□□□ -0.37
SLX4-203ENST00000486524 E2F4Q16254 413 aa12.76□□□□□ -0.37
SLX4-203ENST00000486524 C16orf86Q6ZW13 317 aa12.76□□□□□ -0.37
SLX4-203ENST00000486524 CLEC10AQ8IUN9 316 aa12.76□□□□□ -0.37
SLX4-203ENST00000486524 MTRQ99707 1265 aa12.76□□□□□ -0.37
SLX4-203ENST00000486524 UBA5Q9GZZ9 404 aa12.76□□□□□ -0.37
SLX4-203ENST00000486524 TMEM60Q9H2L4 133 aa12.76□□□□□ -0.37
SLX4-203ENST00000486524 FRMPD2Q68DX3 1309 aaPredicted RBP12.76□□□□□ -0.37
SLX4-203ENST00000486524 PALM3A6NDB9 673 aaPredicted RBP12.76□□□□□ -0.37
SLX4-203ENST00000486524 TEX33O43247 280 aa12.76□□□□□ -0.37
SLX4-203ENST00000486524 PARP1P09874 1014 aaKnown RBP12.76□□□□□ -0.37
SLX4-203ENST00000486524 ERCC5P28715 1186 aaPredicted RBP12.76□□□□□ -0.37
SLX4-203ENST00000486524 NCBP1Q09161 790 aaKnown RBP12.76□□□□□ -0.37
SLX4-203ENST00000486524 DOK7Q18PE1 504 aa12.76□□□□□ -0.37
SLX4-203ENST00000486524 CCDC178Q5BJE1 867 aa12.76□□□□□ -0.37
SLX4-203ENST00000486524 RRAGBQ5VZM2 374 aa12.76□□□□□ -0.37
SLX4-203ENST00000486524 SPECC1LQ69YQ0 1117 aa12.76□□□□□ -0.37
SLX4-203ENST00000486524 FAM177A1Q8N128 213 aaPredicted RBP12.76□□□□□ -0.37
SLX4-203ENST00000486524 GSDMAQ96QA5 445 aa12.76□□□□□ -0.37
SLX4-203ENST00000486524 TCP11L1Q9NUJ3 509 aa12.76□□□□□ -0.37
SLX4-203ENST00000486524 BARHL2Q9NY43 387 aa12.76□□□□□ -0.37
SLX4-203ENST00000486524 MYO1BO43795 1136 aa12.75□□□□□ -0.37
SLX4-203ENST00000486524 STAT6P42226 847 aa12.75□□□□□ -0.37
SLX4-203ENST00000486524 PDXDC2PQ6P474 469 aa12.75□□□□□ -0.37
SLX4-203ENST00000486524 MTERF4Q7Z6M4 381 aaKnown RBP12.75□□□□□ -0.37
SLX4-203ENST00000486524 CCDC148Q8NFR7 591 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms