RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 ZNF75DP51815 510 aa8.78□□□□□ -1
CCDC171-205ENST00000472806 GRIPAP1Q4V328 841 aa8.78□□□□□ -1
CCDC171-205ENST00000472806 SLC27A3Q5K4L6 730 aa8.78□□□□□ -1
CCDC171-205ENST00000472806 OTUD7BQ6GQQ9 843 aa8.78□□□□□ -1
CCDC171-205ENST00000472806 C15orf52Q6ZUT6 534 aaKnown RBP8.78□□□□□ -1
CCDC171-205ENST00000472806 LUZP1Q86V48 1076 aa8.78□□□□□ -1
CCDC171-205ENST00000472806 DZIP1Q86YF9 867 aaKnown RBP8.78□□□□□ -1
CCDC171-205ENST00000472806 RAB11FIP4Q86YS3 637 aa8.78□□□□□ -1
CCDC171-205ENST00000472806 NOSTRINQ8IVI9 506 aa8.78□□□□□ -1
CCDC171-205ENST00000472806 CRACR2BQ8N4Y2 399 aaPredicted RBP8.78□□□□□ -1
CCDC171-205ENST00000472806 CNBD1Q8NA66 436 aa8.78□□□□□ -1
CCDC171-205ENST00000472806 SNIP1Q8TAD8 396 aaKnown RBP8.78□□□□□ -1
CCDC171-205ENST00000472806 PHKBQ93100 1093 aa8.78□□□□□ -1
CCDC171-205ENST00000472806 NSUN4Q96CB9 384 aaKnown RBP8.78□□□□□ -1
CCDC171-205ENST00000472806 DNAJC25Q9H1X3 360 aa8.78□□□□□ -1
CCDC171-205ENST00000472806 ZNF287Q9HBT7 754 aa8.78□□□□□ -1
CCDC171-205ENST00000472806 SRP68Q9UHB9 627 aaKnown RBP8.78□□□□□ -1
CCDC171-205ENST00000472806 TNKSO95271 1327 aa8.78□□□□□ -1
CCDC171-205ENST00000472806 XDHP47989 1333 aa8.78□□□□□ -1
CCDC171-205ENST00000472806 CASZ1Q86V15 1759 aa8.77□□□□□ -1.01
CCDC171-205ENST00000472806 KIF28PB7ZC32 967 aa8.77□□□□□ -1.01
CCDC171-205ENST00000472806 HOXA2O43364 376 aa8.77□□□□□ -1.01
CCDC171-205ENST00000472806 PRPF3O43395 683 aaKnown RBP8.77□□□□□ -1.01
CCDC171-205ENST00000472806 NRDCO43847 1150 aa8.77□□□□□ -1.01
CCDC171-205ENST00000472806 RANBP6O60518 1105 aaKnown RBP8.77□□□□□ -1.01
CCDC171-205ENST00000472806 ZNF202O95125 648 aa8.77□□□□□ -1.01
CCDC171-205ENST00000472806 ATP2B4P23634 1241 aa8.77□□□□□ -1.01
CCDC171-205ENST00000472806 SYKP43405 635 aa8.77□□□□□ -1.01
CCDC171-205ENST00000472806 SMCPP49901 116 aaPredicted RBP8.77□□□□□ -1.01
CCDC171-205ENST00000472806 NDUFA8P51970 172 aa8.77□□□□□ -1.01
CCDC171-205ENST00000472806 MECOMQ03112 1051 aa8.77□□□□□ -1.01
CCDC171-205ENST00000472806 SEC23AQ15436 765 aa8.77□□□□□ -1.01
CCDC171-205ENST00000472806 Q3C1V9 767 aa8.77□□□□□ -1.01
CCDC171-205ENST00000472806 KANK3Q6NY19 840 aa8.77□□□□□ -1.01
CCDC171-205ENST00000472806 TMC4Q7Z404 712 aa8.77□□□□□ -1.01
CCDC171-205ENST00000472806 PLA2G4DQ86XP0 818 aa8.77□□□□□ -1.01
CCDC171-205ENST00000472806 CCDC144CPQ8IYA2 1237 aa8.77□□□□□ -1.01
CCDC171-205ENST00000472806 KRI1Q8N9T8 703 aaKnown RBP8.77□□□□□ -1.01
CCDC171-205ENST00000472806 CTCFLQ8NI51 663 aaPredicted RBP8.77□□□□□ -1.01
CCDC171-205ENST00000472806 NUP133Q8WUM0 1156 aa8.77□□□□□ -1.01
CCDC171-205ENST00000472806 SDR42E1Q8WUS8 393 aa8.77□□□□□ -1.01
CCDC171-205ENST00000472806 RPGRQ92834 1020 aaKnown RBP8.77□□□□□ -1.01
CCDC171-205ENST00000472806 CCDC102AQ96A19 550 aa8.77□□□□□ -1.01
CCDC171-205ENST00000472806 MRFAP1L1Q96HT8 127 aa8.77□□□□□ -1.01
CCDC171-205ENST00000472806 RBM17Q96I25 401 aaKnown RBP8.77□□□□□ -1.01
CCDC171-205ENST00000472806 REPIN1Q9BWE0 567 aaKnown RBP8.77□□□□□ -1.01
CCDC171-205ENST00000472806 FTOQ9C0B1 505 aaKnown RBP eCLIP8.77□□□□□ -1.01
CCDC171-205ENST00000472806 FAM217BQ9NTX9 383 aaPredicted RBP8.77□□□□□ -1.01
CCDC171-205ENST00000472806 IQSEC3Q9UPP2 1182 aaPredicted RBP8.77□□□□□ -1.01
CCDC171-205ENST00000472806 MYH13Q9UKX3 1938 aa8.77□□□□□ -1.01
CCDC171-205ENST00000472806 CACNA1SQ13698 1873 aa8.77□□□□□ -1.01
CCDC171-205ENST00000472806 COL1A1P02452 1464 aaPredicted RBP8.77□□□□□ -1.01
CCDC171-205ENST00000472806 TAF1LQ8IZX4 1826 aa8.76□□□□□ -1.01
CCDC171-205ENST00000472806 A0A1B0GVL5 298 aa8.76□□□□□ -1.01
CCDC171-205ENST00000472806 LDHBP07195 334 aaKnown RBP8.76□□□□□ -1.01
CCDC171-205ENST00000472806 PFKFB1P16118 471 aa8.76□□□□□ -1.01
CCDC171-205ENST00000472806 RXRAP19793 462 aa8.76□□□□□ -1.01
CCDC171-205ENST00000472806 KIF5BP33176 963 aa8.76□□□□□ -1.01
CCDC171-205ENST00000472806 GNAQP50148 359 aa8.76□□□□□ -1.01
CCDC171-205ENST00000472806 NLRP12P59046 1061 aa8.76□□□□□ -1.01
CCDC171-205ENST00000472806 CHAF1AQ13111 956 aaPredicted RBP8.76□□□□□ -1.01
CCDC171-205ENST00000472806 NOLC1Q14978 699 aaKnown RBP eCLIP8.76□□□□□ -1.01
CCDC171-205ENST00000472806 IQCB1Q15051 598 aa8.76□□□□□ -1.01
CCDC171-205ENST00000472806 CTC1Q2NKJ3 1217 aa8.76□□□□□ -1.01
CCDC171-205ENST00000472806 DNTTIP2Q5QJE6 756 aaKnown RBP8.76□□□□□ -1.01
CCDC171-205ENST00000472806 RESP18Q5W5W9 173 aa8.76□□□□□ -1.01
CCDC171-205ENST00000472806 PTCRAQ6ISU1 281 aaPredicted RBP8.76□□□□□ -1.01
CCDC171-205ENST00000472806 CTR9Q6PD62 1173 aa8.76□□□□□ -1.01
CCDC171-205ENST00000472806 OLFM4Q6UX06 510 aa8.76□□□□□ -1.01
CCDC171-205ENST00000472806 DIS3L2Q8IYB7 885 aaKnown RBP8.76□□□□□ -1.01
CCDC171-205ENST00000472806 FAM177A1Q8N128 213 aaPredicted RBP8.76□□□□□ -1.01
CCDC171-205ENST00000472806 MAP3K14Q99558 947 aa8.76□□□□□ -1.01
CCDC171-205ENST00000472806 PYM1Q9BRP8 204 aaKnown RBP8.76□□□□□ -1.01
CCDC171-205ENST00000472806 ATP13A2Q9NQ11 1180 aa8.76□□□□□ -1.01
CCDC171-205ENST00000472806 ANKIB1Q9P2G1 1089 aa8.76□□□□□ -1.01
CCDC171-205ENST00000472806 KIAA1551Q9HCM1 1747 aa8.76□□□□□ -1.01
CCDC171-205ENST00000472806 CCDC88AQ3V6T2 1871 aa8.76□□□□□ -1.01
CCDC171-205ENST00000472806 USP17L12C9JPN9 530 aa8.75□□□□□ -1.01
CCDC171-205ENST00000472806 USP17L21D6R901 530 aa8.75□□□□□ -1.01
CCDC171-205ENST00000472806 PPFIA3O75145 1194 aa8.75□□□□□ -1.01
CCDC171-205ENST00000472806 BBOX1O75936 387 aa8.75□□□□□ -1.01
CCDC171-205ENST00000472806 TM4SF1P30408 202 aa8.75□□□□□ -1.01
CCDC171-205ENST00000472806 KRT2P35908 639 aa8.75□□□□□ -1.01
CCDC171-205ENST00000472806 USP5P45974 858 aa8.75□□□□□ -1.01
CCDC171-205ENST00000472806 GSDMDP57764 484 aa8.75□□□□□ -1.01
CCDC171-205ENST00000472806 DYNLL1P63167 89 aaKnown RBP8.75□□□□□ -1.01
CCDC171-205ENST00000472806 NFX1Q12986 1120 aaKnown RBP8.75□□□□□ -1.01
CCDC171-205ENST00000472806 PTPAQ15257 358 aa8.75□□□□□ -1.01
CCDC171-205ENST00000472806 AXDND1Q5T1B0 1012 aaPredicted RBP8.75□□□□□ -1.01
CCDC171-205ENST00000472806 FAM196AQ6ZSG2 479 aa8.75□□□□□ -1.01
CCDC171-205ENST00000472806 ADGRA1Q86SQ6 560 aa8.75□□□□□ -1.01
CCDC171-205ENST00000472806 NBPF11Q86T75 865 aa8.75□□□□□ -1.01
CCDC171-205ENST00000472806 ENAHQ8N8S7 591 aaPredicted RBP8.75□□□□□ -1.01
CCDC171-205ENST00000472806 PRIMPOLQ96LW4 560 aa8.75□□□□□ -1.01
CCDC171-205ENST00000472806 ZKSCAN3Q9BRR0 538 aa8.75□□□□□ -1.01
CCDC171-205ENST00000472806 MYL10Q9BUA6 226 aa8.75□□□□□ -1.01
CCDC171-205ENST00000472806 SENP2Q9HC62 589 aa8.75□□□□□ -1.01
CCDC171-205ENST00000472806 DCP1AQ9NPI6 582 aaPredicted RBP8.75□□□□□ -1.01
CCDC171-205ENST00000472806 SPTLC3Q9NUV7 552 aa8.75□□□□□ -1.01
CCDC171-205ENST00000472806 TFCP2L1Q9NZI6 479 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms