RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 AEBP2Q6ZN18 517 aaPredicted RBP24.69■■□□□ 1.54
CCDC171-205ENST00000472806 CHIC1Q5VXU3 224 aa23.24■■□□□ 1.31
CCDC171-205ENST00000472806 SENP3Q9H4L4 574 aaPredicted RBP20.83■□□□□ 0.93
CCDC171-205ENST00000472806 PHF23Q9BUL5 403 aaPredicted RBP20.68■□□□□ 0.9
CCDC171-205ENST00000472806 FOXD1Q16676 465 aa19.59■□□□□ 0.73
CCDC171-205ENST00000472806 PLPPR3Q6T4P5 718 aa18.47■□□□□ 0.55
CCDC171-205ENST00000472806 PPP6R1Q9UPN7 881 aa18.38■□□□□ 0.53
CCDC171-205ENST00000472806 ADRA2BP18089 450 aa18.28■□□□□ 0.52
CCDC171-205ENST00000472806 PIAS4Q8N2W9 510 aaPredicted RBP18.23■□□□□ 0.51
CCDC171-205ENST00000472806 MSH5O43196 834 aa18.16■□□□□ 0.5
CCDC171-205ENST00000472806 POTEDQ86YR6 584 aa18■□□□□ 0.47
CCDC171-205ENST00000472806 MAPK8IP2Q13387 824 aaPredicted RBP16.86■□□□□ 0.29
CCDC171-205ENST00000472806 DMRT2Q9Y5R5 561 aa16.56■□□□□ 0.24
CCDC171-205ENST00000472806 SCAF1Q9H7N4 1312 aaKnown RBP16.45■□□□□ 0.22
CCDC171-205ENST00000472806 NISCHQ9Y2I1 1504 aa16.35■□□□□ 0.21
CCDC171-205ENST00000472806 PPP4R3CPQ6ZMV5 832 aa16.27■□□□□ 0.2
CCDC171-205ENST00000472806 DCAF8L1A6NGE4 600 aa15.95■□□□□ 0.14
CCDC171-205ENST00000472806 HOXD11P31277 338 aaPredicted RBP15.92■□□□□ 0.14
CCDC171-205ENST00000472806 CNKSR2Q8WXI2 1034 aa15.89■□□□□ 0.13
CCDC171-205ENST00000472806 RNF216Q9NWF9 866 aaPredicted RBP15.76■□□□□ 0.11
CCDC171-205ENST00000472806 CACNB1Q02641 598 aaPredicted RBP15.71■□□□□ 0.11
CCDC171-205ENST00000472806 RNF39Q9H2S5 420 aa15.6■□□□□ 0.09
CCDC171-205ENST00000472806 NCBP3Q53F19 620 aaKnown RBP15.47■□□□□ 0.07
CCDC171-205ENST00000472806 NPM3O75607 178 aaKnown RBP15.43■□□□□ 0.06
CCDC171-205ENST00000472806 C1QBPQ07021 282 aaKnown RBP15.27■□□□□ 0.04
CCDC171-205ENST00000472806 DNAJC5BQ9UF47 199 aa15.23■□□□□ 0.03
CCDC171-205ENST00000472806 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.18■□□□□ 0.02
CCDC171-205ENST00000472806 KCNA4P22459 653 aa15.14■□□□□ 0.01
CCDC171-205ENST00000472806 U3KPZ7 1027 aaPredicted RBP14.92□□□□□ -0.02
CCDC171-205ENST00000472806 SLC4A2P04920 1241 aa14.8□□□□□ -0.04
CCDC171-205ENST00000472806 SPINK5Q9NQ38 1064 aaPredicted RBP14.79□□□□□ -0.04
CCDC171-205ENST00000472806 CAPN15O75808 1086 aa14.66□□□□□ -0.06
CCDC171-205ENST00000472806 DSG3P32926 999 aa14.62□□□□□ -0.07
CCDC171-205ENST00000472806 TRHP20396 242 aaPredicted RBP14.45□□□□□ -0.1
CCDC171-205ENST00000472806 ABCB7O75027 752 aa14.41□□□□□ -0.1
CCDC171-205ENST00000472806 ZNF219Q9P2Y4 722 aaPredicted RBP14.27□□□□□ -0.13
CCDC171-205ENST00000472806 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.24□□□□□ -0.13
CCDC171-205ENST00000472806 HNRNPUL2Q1KMD3 747 aaKnown RBP14.24□□□□□ -0.13
CCDC171-205ENST00000472806 SAMD1Q6SPF0 538 aaPredicted RBP14.22□□□□□ -0.13
CCDC171-205ENST00000472806 APLP2Q06481 763 aa14.2□□□□□ -0.14
CCDC171-205ENST00000472806 SLC4A1APQ9BWU0 796 aaKnown RBP14.18□□□□□ -0.14
CCDC171-205ENST00000472806 CCDC180Q9P1Z9 1646 aa14.15□□□□□ -0.14
CCDC171-205ENST00000472806 MYCNP04198 464 aaPredicted RBP14.15□□□□□ -0.14
CCDC171-205ENST00000472806 ATF5Q9Y2D1 282 aaPredicted RBP14.08□□□□□ -0.16
CCDC171-205ENST00000472806 POTEHQ6S545 545 aa14.06□□□□□ -0.16
CCDC171-205ENST00000472806 POLA2Q14181 598 aa14.04□□□□□ -0.16
CCDC171-205ENST00000472806 FOXD4L1Q9NU39 408 aa14.01□□□□□ -0.17
CCDC171-205ENST00000472806 ZBTB22O15209 634 aa13.99□□□□□ -0.17
CCDC171-205ENST00000472806 ZCCHC6Q5VYS8 1495 aaKnown RBP13.8□□□□□ -0.2
CCDC171-205ENST00000472806 RBM42Q9BTD8 480 aaKnown RBP13.76□□□□□ -0.21
CCDC171-205ENST00000472806 CHRDL2Q6WN34 429 aa13.62□□□□□ -0.23
CCDC171-205ENST00000472806 OSCARQ8IYS5 282 aa13.62□□□□□ -0.23
CCDC171-205ENST00000472806 DCAF1Q9Y4B6 1507 aa13.58□□□□□ -0.24
CCDC171-205ENST00000472806 ZBTB12Q9Y330 459 aaPredicted RBP13.54□□□□□ -0.24
CCDC171-205ENST00000472806 AKT1S1Q96B36 256 aa13.5□□□□□ -0.25
CCDC171-205ENST00000472806 ATXN8OSP0DMR3 200 aa13.49□□□□□ -0.25
CCDC171-205ENST00000472806 SHROOM4Q9ULL8 1493 aa13.48□□□□□ -0.25
CCDC171-205ENST00000472806 REM2Q8IYK8 340 aaPredicted RBP13.47□□□□□ -0.25
CCDC171-205ENST00000472806 DCAF8L2P0C7V8 631 aa13.37□□□□□ -0.27
CCDC171-205ENST00000472806 MKRN4PQ13434 485 aaPredicted RBP13.37□□□□□ -0.27
CCDC171-205ENST00000472806 PITPNM1O00562 1244 aa13.35□□□□□ -0.27
CCDC171-205ENST00000472806 PIP4P2Q8N4L2 257 aa13.34□□□□□ -0.27
CCDC171-205ENST00000472806 MYO15BQ96JP2 1530 aa13.31□□□□□ -0.28
CCDC171-205ENST00000472806 FBLN2P98095 1184 aa13.25□□□□□ -0.29
CCDC171-205ENST00000472806 CSRNP3Q8WYN3 585 aa13.23□□□□□ -0.29
CCDC171-205ENST00000472806 FXR2P51116 673 aaKnown RBP eCLIP13.21□□□□□ -0.29
CCDC171-205ENST00000472806 SPDYE2BA6NHP3 402 aa13.2□□□□□ -0.3
CCDC171-205ENST00000472806 SPDYE6P0CI01 402 aa13.2□□□□□ -0.3
CCDC171-205ENST00000472806 SPDYE2Q495Y8 402 aa13.2□□□□□ -0.3
CCDC171-205ENST00000472806 SUPT5HO00267 1087 aaKnown RBP13.17□□□□□ -0.3
CCDC171-205ENST00000472806 SP7Q8TDD2 431 aaPredicted RBP13.12□□□□□ -0.31
CCDC171-205ENST00000472806 NACADO15069 1562 aa13.11□□□□□ -0.31
CCDC171-205ENST00000472806 ZNF692Q9BU19 519 aaPredicted RBP13.11□□□□□ -0.31
CCDC171-205ENST00000472806 SSUH2Q9Y2M2 353 aa13.09□□□□□ -0.31
CCDC171-205ENST00000472806 HAX1O00165 279 aa13.08□□□□□ -0.32
CCDC171-205ENST00000472806 EVX2Q03828 476 aa13.08□□□□□ -0.32
CCDC171-205ENST00000472806 CLEC11AQ9Y240 323 aa13.08□□□□□ -0.32
CCDC171-205ENST00000472806 EHMT2Q96KQ7 1210 aa13.05□□□□□ -0.32
CCDC171-205ENST00000472806 ABCC9O60706 1549 aa13.01□□□□□ -0.33
CCDC171-205ENST00000472806 SCRIBQ14160 1630 aa12.99□□□□□ -0.33
CCDC171-205ENST00000472806 PRKAR2AP13861 404 aaKnown RBP12.98□□□□□ -0.33
CCDC171-205ENST00000472806 SPDYE1Q8NFV5 336 aaPredicted RBP12.98□□□□□ -0.33
CCDC171-205ENST00000472806 PABPN1Q86U42 306 aaKnown RBP eCLIP12.95□□□□□ -0.34
CCDC171-205ENST00000472806 CHADLQ6NUI6 762 aa12.93□□□□□ -0.34
CCDC171-205ENST00000472806 RB1CC1Q8TDY2 1594 aa12.92□□□□□ -0.34
CCDC171-205ENST00000472806 PRR29P0C7W0 189 aa12.79□□□□□ -0.36
CCDC171-205ENST00000472806 C19orf67A6NJJ6 358 aa12.78□□□□□ -0.36
CCDC171-205ENST00000472806 RSF1Q96T23 1441 aaPredicted RBP12.78□□□□□ -0.36
CCDC171-205ENST00000472806 GABBR2O75899 941 aa12.65□□□□□ -0.38
CCDC171-205ENST00000472806 BAZ1AQ9NRL2 1556 aaPredicted RBP12.64□□□□□ -0.39
CCDC171-205ENST00000472806 FARP1Q9Y4F1 1045 aaPredicted RBP12.61□□□□□ -0.39
CCDC171-205ENST00000472806 SPDYE4A6NLX3 237 aa12.6□□□□□ -0.39
CCDC171-205ENST00000472806 CECR2Q9BXF3 1484 aa12.59□□□□□ -0.39
CCDC171-205ENST00000472806 MROH2BQ7Z745 1585 aa12.59□□□□□ -0.39
CCDC171-205ENST00000472806 UNC13AQ9UPW8 1703 aa12.56□□□□□ -0.4
CCDC171-205ENST00000472806 CD44P16070 742 aaKnown RBP12.55□□□□□ -0.4
CCDC171-205ENST00000472806 CREBZFQ9NS37 354 aa12.55□□□□□ -0.4
CCDC171-205ENST00000472806 WIZO95785 1651 aa12.5□□□□□ -0.41
CCDC171-205ENST00000472806 SMARCA4P51532 1647 aa12.49□□□□□ -0.41
CCDC171-205ENST00000472806 POTEIP0CG38 1075 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms