RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 E2F4Q16254 413 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 TRIM42Q8IWZ5 723 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 SMC5Q8IY18 1101 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 NECTIN2Q92692 538 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 FAM193BQ96PV7 902 aaPredicted RBP3.01□□□□□ -1.93
CHD9-202ENST00000398510 CDK5RAP1Q96SZ6 601 aaKnown RBP3.01□□□□□ -1.93
CHD9-202ENST00000398510 LLPHQ9BRT6 129 aaKnown RBP3.01□□□□□ -1.93
CHD9-202ENST00000398510 UBA5Q9GZZ9 404 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 KDM4CQ9H3R0 1056 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 AGTPBP1Q9UPW5 1226 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 FAM169AQ9Y6X4 670 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 CROCCQ5TZA2 2017 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 CRB1P82279 1406 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 MAGEB6P1A0A0J9YX57 407 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 E7EVH7 732 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 IFIT3O14879 490 aaKnown RBP3.01□□□□□ -1.93
CHD9-202ENST00000398510 NAPAP54920 295 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 BRPF1P55201 1214 aaPredicted RBP3.01□□□□□ -1.93
CHD9-202ENST00000398510 DEUP1Q05D60 604 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 WASHC5Q12768 1159 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 SEPT2Q15019 361 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 ARL13BQ3SXY8 428 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 MCMDC2Q4G0Z9 681 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 KHDRBS2Q5VWX1 349 aaKnown RBP3.01□□□□□ -1.93
CHD9-202ENST00000398510 KRT79Q5XKE5 535 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 GSTA5Q7RTV2 222 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 OXCT2Q9BYC2 517 aaPredicted RBP3.01□□□□□ -1.93
CHD9-202ENST00000398510 LRFN2Q9ULH4 789 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 ZKSCAN5Q9Y2L8 839 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 ADGRB1O14514 1584 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 POSTNQ15063 836 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 TTLL5Q6EMB2 1281 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 ARMCX2Q7L311 632 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 DZIP3Q86Y13 1208 aaKnown RBP3.01□□□□□ -1.93
CHD9-202ENST00000398510 CACNA2D3Q8IZS8 1091 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 NEK1Q96PY6 1258 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 LIMCH1Q9UPQ0 1083 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 ANGPTL3Q9Y5C1 460 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 MINDY4BA8MYZ0 360 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 STAM2O75886 525 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 GFAPP14136 432 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 MARCKSP29966 332 aaPredicted RBP3.01□□□□□ -1.93
CHD9-202ENST00000398510 ZNF165P49910 485 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 ITIH3Q06033 890 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 TCERG1LQ5VWI1 586 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 RINT1Q6NUQ1 792 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 IQUBQ8NA54 791 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 EPS15L1Q9UBC2 864 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 SUGT1Q9Y2Z0 365 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 COL5A2P05997 1499 aaPredicted RBP3.01□□□□□ -1.93
CHD9-202ENST00000398510 STXBP3O00186 592 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 DYNC1I1O14576 645 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 SART1O43290 800 aaKnown RBP3.01□□□□□ -1.93
CHD9-202ENST00000398510 DNAJC8O75937 253 aaPredicted RBP3.01□□□□□ -1.93
CHD9-202ENST00000398510 OATP04181 439 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 SCG2P13521 617 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 SLC4A3P48751 1232 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 KRT39Q6A163 491 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 KIAA0825Q8IV33 1275 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 SIRT1Q96EB6 747 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 TMEM87BQ96K49 555 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 ECT2Q9H8V3 914 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 KDRP35968 1356 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 ALS2Q96Q42 1657 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 MYCNP04198 464 aaPredicted RBP3.01□□□□□ -1.93
CHD9-202ENST00000398510 PDE4DQ08499 809 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 PRPSAP1Q14558 356 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 SPECC1Q5M775 1068 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 ICE2Q659A1 982 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 REM2Q8IYK8 340 aaPredicted RBP3.01□□□□□ -1.93
CHD9-202ENST00000398510 SIL1Q9H173 461 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 AAASQ9NRG9 546 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 GINM1Q9NU53 330 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 PPP1R9AQ9ULJ8 1098 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 TBX22Q9Y458 520 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 ESYT2A0FGR8 921 aa3□□□□□ -1.93
CHD9-202ENST00000398510 KRT87PA6NCN2 255 aa3□□□□□ -1.93
CHD9-202ENST00000398510 NNMTP40261 264 aa3□□□□□ -1.93
CHD9-202ENST00000398510 AK2P54819 239 aa3□□□□□ -1.93
CHD9-202ENST00000398510 DPP8Q6V1X1 898 aaPredicted RBP3□□□□□ -1.93
CHD9-202ENST00000398510 KIF13BQ9NQT8 1826 aa3□□□□□ -1.93
CHD9-202ENST00000398510 GCFC2P16383 781 aaKnown RBP3□□□□□ -1.93
CHD9-202ENST00000398510 HNRNPH1P31943 449 aaKnown RBP3□□□□□ -1.93
CHD9-202ENST00000398510 TRAPPC10P48553 1259 aa3□□□□□ -1.93
CHD9-202ENST00000398510 CCNG2Q16589 344 aa3□□□□□ -1.93
CHD9-202ENST00000398510 C10orf76Q5T2E6 689 aa3□□□□□ -1.93
CHD9-202ENST00000398510 FSIP1Q8NA03 581 aa3□□□□□ -1.93
CHD9-202ENST00000398510 SNX19Q92543 992 aa3□□□□□ -1.93
CHD9-202ENST00000398510 SDCCAG3Q96C92 435 aa3□□□□□ -1.93
CHD9-202ENST00000398510 KATNAL1Q9BW62 490 aa3□□□□□ -1.93
CHD9-202ENST00000398510 DRC3Q9H069 523 aa3□□□□□ -1.93
CHD9-202ENST00000398510 FAM96AQ9H5X1 160 aa3□□□□□ -1.93
CHD9-202ENST00000398510 UTP11Q9Y3A2 253 aaKnown RBP3□□□□□ -1.93
CHD9-202ENST00000398510 RGPD3A6NKT7 1758 aaPredicted RBP3□□□□□ -1.93
CHD9-202ENST00000398510 MED23Q9ULK4 1368 aa3□□□□□ -1.93
CHD9-202ENST00000398510 TRIM75PA6NK02 468 aa3□□□□□ -1.93
CHD9-202ENST00000398510 GNRH1P01148 92 aa3□□□□□ -1.93
CHD9-202ENST00000398510 PPP2R1AP30153 589 aa3□□□□□ -1.93
CHD9-202ENST00000398510 GABPAQ06546 454 aa3□□□□□ -1.93
CHD9-202ENST00000398510 NFKBIBQ15653 356 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms