RNA–Protein interactions for RNA: ENST00000215956.9

SNU13-201, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-201ENST00000215956 NBPF3Q9H094 633 aa14.29□□□□□ -0.12
SNU13-201ENST00000215956 ANAPC4Q9UJX5 808 aa14.29□□□□□ -0.12
SNU13-201ENST00000215956 SLURP2P0DP57 97 aa14.28□□□□□ -0.12
SNU13-201ENST00000215956 PLCG2P16885 1265 aa14.28□□□□□ -0.12
SNU13-201ENST00000215956 SYN1P17600 705 aa14.28□□□□□ -0.12
SNU13-201ENST00000215956 MAGEA10P43363 369 aaPredicted RBP14.28□□□□□ -0.12
SNU13-201ENST00000215956 CCDC84Q86UT8 332 aaPredicted RBP14.28□□□□□ -0.12
SNU13-201ENST00000215956 TDHQ8IZJ6 230 aa14.28□□□□□ -0.12
SNU13-201ENST00000215956 TCEANC2Q96MN5 208 aa14.28□□□□□ -0.12
SNU13-201ENST00000215956 EPB41L4AQ9HCS5 686 aaPredicted RBP14.28□□□□□ -0.12
SNU13-201ENST00000215956 GAKO14976 1311 aa14.28□□□□□ -0.12
SNU13-201ENST00000215956 EYSQ5T1H1 3165 aa14.28□□□□□ -0.12
SNU13-201ENST00000215956 DDTLA6NHG4 134 aaPredicted RBP14.27□□□□□ -0.12
SNU13-201ENST00000215956 BAG4O95429 457 aaKnown RBP14.27□□□□□ -0.12
SNU13-201ENST00000215956 LARGE1O95461 756 aa14.27□□□□□ -0.12
SNU13-201ENST00000215956 GJB2P29033 226 aa14.27□□□□□ -0.12
SNU13-201ENST00000215956 TMTC2Q8N394 836 aa14.27□□□□□ -0.12
SNU13-201ENST00000215956 C11orf49Q9H6J7 331 aa14.27□□□□□ -0.12
SNU13-201ENST00000215956 HMX1Q9NP08 348 aaPredicted RBP14.27□□□□□ -0.12
SNU13-201ENST00000215956 MTMR10Q9NXD2 777 aa14.27□□□□□ -0.12
SNU13-201ENST00000215956 ARPP21Q9UBL0 812 aaPredicted RBP14.27□□□□□ -0.12
SNU13-201ENST00000215956 MAST2Q6P0Q8 1798 aa14.27□□□□□ -0.13
SNU13-201ENST00000215956 RPTORQ8N122 1335 aa14.27□□□□□ -0.13
SNU13-201ENST00000215956 ERICH2A1L162 156 aa14.26□□□□□ -0.13
SNU13-201ENST00000215956 STX6O43752 255 aa14.26□□□□□ -0.13
SNU13-201ENST00000215956 PPP4CP60510 307 aa14.26□□□□□ -0.13
SNU13-201ENST00000215956 PPARAQ07869 468 aa14.26□□□□□ -0.13
SNU13-201ENST00000215956 CSPP1Q1MSJ5 1256 aa14.26□□□□□ -0.13
SNU13-201ENST00000215956 TBC1D10CQ8IV04 446 aa14.26□□□□□ -0.13
SNU13-201ENST00000215956 PROCA1Q8NCQ7 364 aaPredicted RBP14.26□□□□□ -0.13
SNU13-201ENST00000215956 DDX4Q9NQI0 724 aaKnown RBP14.26□□□□□ -0.13
SNU13-201ENST00000215956 GCLCP48506 637 aaPredicted RBP14.26□□□□□ -0.13
SNU13-201ENST00000215956 TRIM32Q13049 653 aa14.26□□□□□ -0.13
SNU13-201ENST00000215956 PICALMQ13492 652 aa14.26□□□□□ -0.13
SNU13-201ENST00000215956 CPLX2Q6PUV4 134 aaKnown RBP14.26□□□□□ -0.13
SNU13-201ENST00000215956 FAM184AQ8NB25 1140 aa14.26□□□□□ -0.13
SNU13-201ENST00000215956 ESR2Q92731 530 aa14.26□□□□□ -0.13
SNU13-201ENST00000215956 LARP6Q9BRS8 491 aaKnown RBP14.26□□□□□ -0.13
SNU13-201ENST00000215956 PRKAB2O43741 272 aa14.25□□□□□ -0.13
SNU13-201ENST00000215956 ZSCAN22P10073 491 aaPredicted RBP14.25□□□□□ -0.13
SNU13-201ENST00000215956 LIFRP42702 1097 aa14.25□□□□□ -0.13
SNU13-201ENST00000215956 SBK1Q52WX2 424 aa14.25□□□□□ -0.13
SNU13-201ENST00000215956 SYNE3Q6ZMZ3 975 aa14.25□□□□□ -0.13
SNU13-201ENST00000215956 ADGRA1Q86SQ6 560 aa14.25□□□□□ -0.13
SNU13-201ENST00000215956 NECAB1Q8N987 351 aa14.25□□□□□ -0.13
SNU13-201ENST00000215956 RGS22Q8NE09 1264 aa14.25□□□□□ -0.13
SNU13-201ENST00000215956 FAM163AQ96GL9 167 aaPredicted RBP14.25□□□□□ -0.13
SNU13-201ENST00000215956 UBE2OQ9C0C9 1292 aaKnown RBP14.25□□□□□ -0.13
SNU13-201ENST00000215956 AATFQ9NY61 560 aaKnown RBP eCLIP14.25□□□□□ -0.13
SNU13-201ENST00000215956 GJD2Q9UKL4 321 aa14.25□□□□□ -0.13
SNU13-201ENST00000215956 OGDHLQ9ULD0 1010 aa14.25□□□□□ -0.13
SNU13-201ENST00000215956 MROH7-TTC4A0A0A0MT08 1334 aa14.25□□□□□ -0.13
SNU13-201ENST00000215956 CDKL5O76039 1030 aa14.24□□□□□ -0.13
SNU13-201ENST00000215956 SYT1P21579 422 aa14.24□□□□□ -0.13
SNU13-201ENST00000215956 BTDP43251 543 aa14.24□□□□□ -0.13
SNU13-201ENST00000215956 DYNLL1P63167 89 aaKnown RBP14.24□□□□□ -0.13
SNU13-201ENST00000215956 APOBRQ0VD83 1088 aa14.24□□□□□ -0.13
SNU13-201ENST00000215956 STK3Q13188 491 aa14.24□□□□□ -0.13
SNU13-201ENST00000215956 LARP1BQ659C4 914 aaKnown RBP14.24□□□□□ -0.13
SNU13-201ENST00000215956 TRIB2Q92519 343 aa14.24□□□□□ -0.13
SNU13-201ENST00000215956 LRRC2Q9BYS8 371 aa14.24□□□□□ -0.13
SNU13-201ENST00000215956 NAP1L2Q9ULW6 460 aaPredicted RBP14.24□□□□□ -0.13
SNU13-201ENST00000215956 FRMPD3Q5JV73 1810 aa14.24□□□□□ -0.13
SNU13-201ENST00000215956 PRUNE2Q8WUY3 3088 aa14.23□□□□□ -0.13
SNU13-201ENST00000215956 FAM196BA6NMK8 535 aa14.23□□□□□ -0.13
SNU13-201ENST00000215956 SH2B2O14492 632 aaPredicted RBP14.23□□□□□ -0.13
SNU13-201ENST00000215956 TBC1D12O60347 775 aa14.23□□□□□ -0.13
SNU13-201ENST00000215956 PDIA3P30101 505 aaKnown RBP14.23□□□□□ -0.13
SNU13-201ENST00000215956 USP5P45974 858 aa14.23□□□□□ -0.13
SNU13-201ENST00000215956 RCAN1P53805 252 aa14.23□□□□□ -0.13
SNU13-201ENST00000215956 SPP2Q13103 211 aa14.23□□□□□ -0.13
SNU13-201ENST00000215956 PABPC4Q13310 644 aaKnown RBP eCLIP14.23□□□□□ -0.132e-7■■■■□ 22.8
SNU13-201ENST00000215956 ZNF280CQ8ND82 737 aa14.23□□□□□ -0.13
SNU13-201ENST00000215956 SDR42E1Q8WUS8 393 aa14.23□□□□□ -0.13
SNU13-201ENST00000215956 COL25A1Q9BXS0 654 aaPredicted RBP14.23□□□□□ -0.13
SNU13-201ENST00000215956 ZNF287Q9HBT7 754 aa14.23□□□□□ -0.13
SNU13-201ENST00000215956 TOMM22Q9NS69 142 aa14.23□□□□□ -0.13
SNU13-201ENST00000215956 ZDHHC9Q9Y397 364 aa14.23□□□□□ -0.13
SNU13-201ENST00000215956 PFASO15067 1338 aa14.23□□□□□ -0.13
SNU13-201ENST00000215956 KLF18A0A0U1RQI7 1052 aa14.23□□□□□ -0.13
SNU13-201ENST00000215956 MINDY4BA8MYZ0 360 aa14.23□□□□□ -0.13
SNU13-201ENST00000215956 B4E1Z4 1266 aa14.23□□□□□ -0.13
SNU13-201ENST00000215956 CPLX1O14810 134 aa14.23□□□□□ -0.13
SNU13-201ENST00000215956 IFIT3O14879 490 aaKnown RBP14.23□□□□□ -0.13
SNU13-201ENST00000215956 HMGCS2P54868 508 aa14.23□□□□□ -0.13
SNU13-201ENST00000215956 ANTXR2P58335 489 aa14.23□□□□□ -0.13
SNU13-201ENST00000215956 PDE4BQ07343 736 aa14.23□□□□□ -0.13
SNU13-201ENST00000215956 ST3GAL1Q11201 340 aa14.23□□□□□ -0.13
SNU13-201ENST00000215956 SCRN1Q12765 414 aa14.23□□□□□ -0.13
SNU13-201ENST00000215956 CCDC178Q5BJE1 867 aa14.23□□□□□ -0.13
SNU13-201ENST00000215956 TMEM67Q5HYA8 995 aa14.23□□□□□ -0.13
SNU13-201ENST00000215956 NFXL1Q6ZNB6 911 aa14.23□□□□□ -0.13
SNU13-201ENST00000215956 SGMS1Q86VZ5 419 aa14.23□□□□□ -0.13
SNU13-201ENST00000215956 SMARCC2Q8TAQ2 1214 aa14.23□□□□□ -0.13
SNU13-201ENST00000215956 UBAC1Q9BSL1 405 aa14.23□□□□□ -0.13
SNU13-201ENST00000215956 OSBPL5Q9H0X9 879 aaPredicted RBP14.23□□□□□ -0.13
SNU13-201ENST00000215956 ASCC2Q9H1I8 757 aaPredicted RBP14.23□□□□□ -0.13
SNU13-201ENST00000215956 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.23□□□□□ -0.13
SNU13-201ENST00000215956 LAMA4Q16363 1823 aa14.22□□□□□ -0.13
SNU13-201ENST00000215956 GPR75-ASB3A0A0A6YYF3 556 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms