RNA–Protein interactions for RNA: ENSMUST00000093490.8

Clcn3-203, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-203ENSMUST00000093490 MypnQ5DTJ9 1315 aa17.41■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Gm38392E9Q2A2 434 aa17.41■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Hspd1P63038 573 aaKnown RBP17.41■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Stim2P83093 746 aa17.41■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Ccdc174Q3U155 467 aa17.41■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Kiaa0319Q5SZV5 1081 aa17.41■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Ppp2r2cQ8BG02 447 aa17.41■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Kiaa1107Q80TK0 1369 aa17.41■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Rps6ka1P18653 724 aa17.41■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Sema3eP70275 775 aa17.41■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Znf652Q5DU09 608 aa17.41■□□□□ 0.38
Clcn3-203ENSMUST00000093490 PigbQ9JJQ0 542 aa17.41■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Ak9G3UYQ4 1894 aa17.41■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Trove2O08848 538 aa17.41■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Gsta4P24472 222 aa17.41■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Gpr108Q91WD0 569 aa17.41■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Gngt1Q61012 74 aa17.4■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Slc44a1Q6X893 653 aa17.4■□□□□ 0.38
Clcn3-203ENSMUST00000093490 S100bP50114 92 aa17.4■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Mtss1lQ6P9S0 715 aa17.4■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Kcnv2Q8CFS6 562 aa17.4■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Tpd52l2Q9CYZ2 220 aaKnown RBP17.4■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Prkg1P0C605 671 aa17.4■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Psmd1Q3TXS7 953 aa17.4■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Mphosph8Q3TYA6 858 aaKnown RBP17.4■□□□□ 0.38
Clcn3-203ENSMUST00000093490 EspnlQ3UYR4 1005 aa17.4■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Arhgap10Q6Y5D8 786 aa17.4■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Frmpd4A2AFR3 1320 aa17.4■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Gpr182P43142 395 aa17.4■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Rab44Q8CB87 725 aa17.4■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Cacna2d3Q9Z1L5 1091 aa17.4■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Speer4f2E9Q366 295 aa17.4■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Herc4Q6PAV2 1057 aa17.4■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Znf365Q8BG89 408 aa17.4■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Nrbp2Q91V36 499 aa17.4■□□□□ 0.38
Clcn3-203ENSMUST00000093490 RilpQ5ND29 369 aa17.39■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Rab34Q64008 259 aa17.39■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Cnnm4Q69ZF7 771 aa17.39■□□□□ 0.37
Clcn3-203ENSMUST00000093490 QarsQ8BML9 775 aa17.39■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Lonrf3Q9D4H7 753 aa17.39■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Q9DAQ4 598 aa17.39■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Myl7Q9QVP4 175 aa17.39■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Tnni3P48787 211 aa17.39■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Oxr1Q4KMM3 866 aa17.39■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Rps6ka5Q8C050 863 aa17.39■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Capn12Q9ER56 720 aa17.39■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Ahdc1Q6PAL7 1594 aaKnown RBP17.39■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Atp7bQ64446 1462 aa17.39■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Speer2E9Q9U2 264 aa17.39■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Ripply1Q2WG77 201 aa17.39■□□□□ 0.37
Clcn3-203ENSMUST00000093490 HelbQ6NVF4 1074 aa17.39■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Dcaf15Q6PFH3 600 aa17.39■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Wdr24Q8CFJ9 790 aa17.39■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Golga1Q9CW79 758 aa17.39■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Pold4Q9CWP8 107 aa17.39■□□□□ 0.37
Clcn3-203ENSMUST00000093490 DnttP09838 530 aa17.38■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Ppp2r5eQ61151 467 aa17.38■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Anks6Q6GQX6 883 aa17.38■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Etf1Q8BWY3 437 aaKnown RBP17.38■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Lonp1Q8CGK3 949 aaKnown RBP17.38■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Stx17Q9D0I4 301 aa17.38■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Hecw2Q6I6G8 1578 aa17.38■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Spata16Q8C636 571 aa17.38■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Ppil4Q9CXG3 492 aaKnown RBP17.38■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Styxl1Q9DAR2 321 aa17.38■□□□□ 0.37
Clcn3-203ENSMUST00000093490 H2-OaQ9QWV1 250 aa17.38■□□□□ 0.37
Clcn3-203ENSMUST00000093490 ChmQ9QXG2 665 aa17.38■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Dip2cE9PWR4 1557 aa17.38■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Rad23aP54726 363 aa17.38■□□□□ 0.37
Clcn3-203ENSMUST00000093490 MarsQ68FL6 902 aaKnown RBP17.38■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Rsad2Q8CBB9 362 aa17.38■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Dip2aQ8BWT5 1523 aa17.38■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Swap70Q6A028 585 aaKnown RBP17.37■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Fgd5Q80UZ0 1219 aa17.37■□□□□ 0.37
Clcn3-203ENSMUST00000093490 GabrdP22933 449 aa17.37■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Cct6bQ61390 531 aa17.37■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Rassf10Q8BL43 508 aa17.37■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Kcnk13Q8R1P5 405 aa17.37■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Robo2Q7TPD3 1470 aa17.37■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Arhgef10lA2AWP8 1280 aa17.37■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Zfp597E9Q6S0 419 aa17.37■□□□□ 0.37
Clcn3-203ENSMUST00000093490 WaplQ65Z40 1200 aaKnown RBP17.37■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Atp1a3Q6PIC6 1013 aa17.37■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Klhl7Q8BUL5 586 aa17.37■□□□□ 0.37
Clcn3-203ENSMUST00000093490 GancQ8BVW0 898 aa17.37■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Q8C6G1 249 aa17.37■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Ssx2ipQ8VC66 615 aa17.37■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Krt20Q9D312 431 aa17.37■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Cep83Q9D5R3 692 aa17.37■□□□□ 0.37
Clcn3-203ENSMUST00000093490 RpgrQ9R0X5 1001 aa17.37■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Tlr7P58681 1050 aa17.37■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Mettl24Q8CCB5 363 aa17.37■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Afg3l2Q8JZQ2 802 aaKnown RBP17.37■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Cul7Q8VE73 1689 aa17.37■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Ncf2O70145 525 aa17.37■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Parp2O88554 559 aa17.37■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Slc38a10Q5I012 1090 aa17.37■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Gm5169Q5M8P2 212 aa17.37■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Tmem179Q8BHH9 233 aa17.37■□□□□ 0.37
Clcn3-203ENSMUST00000093490 SarnpQ9D1J3 210 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 38.2 ms