RNA–Protein interactions for RNA: YNR007C

ATG3, Transcript of E2-like enzyme, yeast

Gene ATG3, Length 933 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG3	YNR007C	YFH7	P43591	353 aa		3.37	□□□□□ -1.87
ATG3	YNR007C	PUS4	P48567	403 aa	Known RBP	3.37	□□□□□ -1.87
ATG3	YNR007C	VPS4	P52917	437 aa		3.37	□□□□□ -1.87
ATG3	YNR007C	RPT4	P53549	437 aa	Known RBP	3.37	□□□□□ -1.87
ATG3	YNR007C	COP1	P53622	1201 aa	Known RBP	3.37	□□□□□ -1.87
ATG3	YNR007C	HEF3	P53978	1044 aa	Known RBP	3.37	□□□□□ -1.87
ATG3	YNR007C	MET14	Q02196	202 aa		3.37	□□□□□ -1.87
ATG3	YNR007C	ECM38	Q05902	660 aa	Predicted RBP	3.37	□□□□□ -1.87
ATG3	YNR007C	MLC2	Q06580	163 aa		3.37	□□□□□ -1.87
ATG3	YNR007C	CYK3	Q07533	885 aa		3.37	□□□□□ -1.87
ATG3	YNR007C	CWC2	Q12046	339 aa	Predicted RBP	3.37	□□□□□ -1.87
ATG3	YNR007C	RRP6	Q12149	733 aa	Known RBP	3.37	□□□□□ -1.87
ATG3	YNR007C	RRI2	Q12348	645 aa		3.37	□□□□□ -1.87
ATG3	YNR007C	MPD2	Q99316	277 aa		3.37	□□□□□ -1.87
ATG3	YNR007C	YEL076C-A	P0CX16	216 aa		3.36	□□□□□ -1.87
ATG3	YNR007C	YLR464W	P0CX17	216 aa		3.36	□□□□□ -1.87
ATG3	YNR007C	CWH43	P25618	953 aa		3.36	□□□□□ -1.87
ATG3	YNR007C	CDC5	P32562	705 aa		3.36	□□□□□ -1.87
ATG3	YNR007C	OCT1	P35999	772 aa		3.36	□□□□□ -1.87
ATG3	YNR007C	YHR131C	P38835	850 aa		3.36	□□□□□ -1.87
ATG3	YNR007C	SAW1	P39735	261 aa		3.36	□□□□□ -1.87
ATG3	YNR007C	YEL076C	P39971	216 aa		3.36	□□□□□ -1.87
ATG3	YNR007C	GSM1	P42950	618 aa		3.36	□□□□□ -1.87
ATG3	YNR007C	YFL040W	P43562	540 aa		3.36	□□□□□ -1.87
ATG3	YNR007C	IRC4	Q03036	179 aa		3.36	□□□□□ -1.87
ATG3	YNR007C	FCP1	Q03254	732 aa		3.36	□□□□□ -1.87
ATG3	YNR007C	TRI1	Q05024	226 aa		3.36	□□□□□ -1.87
ATG3	YNR007C	PNO1	Q99216	274 aa	Known RBP	3.36	□□□□□ -1.87
ATG3	YNR007C	FAS2	P19097	1887 aa	Known RBP	3.36	□□□□□ -1.87
ATG3	YNR007C	FIG2	P25653	1609 aa		3.36	□□□□□ -1.87
ATG3	YNR007C	PMD1	P32634	1753 aa		3.35	□□□□□ -1.87
ATG3	YNR007C	CET1	O13297	549 aa	Predicted RBP	3.35	□□□□□ -1.87
ATG3	YNR007C	PHO3	P24031	467 aa		3.35	□□□□□ -1.87
ATG3	YNR007C	LCB1	P25045	558 aa	Known RBP	3.35	□□□□□ -1.87
ATG3	YNR007C	RPS7A	P26786	190 aa	Known RBP	3.35	□□□□□ -1.87
ATG3	YNR007C	SPL2	P38839	148 aa		3.35	□□□□□ -1.87
ATG3	YNR007C	RRP8	P38961	392 aa	Known RBP	3.35	□□□□□ -1.87
ATG3	YNR007C	RAD33	Q04231	177 aa		3.35	□□□□□ -1.87
ATG3	YNR007C	VMS1	Q04311	632 aa	Known RBP	3.35	□□□□□ -1.87
ATG3	YNR007C	GAL1	P04385	528 aa		3.34	□□□□□ -1.87
ATG3	YNR007C	CBP3	P21560	335 aa		3.34	□□□□□ -1.87
ATG3	YNR007C	COQ3	P27680	312 aa		3.34	□□□□□ -1.87
ATG3	YNR007C	PAH1	P32567	862 aa		3.34	□□□□□ -1.87
ATG3	YNR007C	TGL1	P34163	548 aa		3.34	□□□□□ -1.87
ATG3	YNR007C	GCS1	P35197	352 aa		3.34	□□□□□ -1.87
ATG3	YNR007C	SDH8	P38345	138 aa		3.34	□□□□□ -1.87
ATG3	YNR007C	YLF2	P38746	405 aa		3.34	□□□□□ -1.87
ATG3	YNR007C	ASK10	P48361	1146 aa		3.34	□□□□□ -1.87
ATG3	YNR007C	MNT2	P53059	558 aa		3.34	□□□□□ -1.87
ATG3	YNR007C	YNL092W	P53934	400 aa		3.34	□□□□□ -1.87
ATG3	YNR007C	UBX4	P54730	416 aa		3.34	□□□□□ -1.87
ATG3	YNR007C	GSC2	P40989	1895 aa		3.34	□□□□□ -1.87
ATG3	YNR007C	TPM1	P17536	199 aa	Known RBP	3.33	□□□□□ -1.88
ATG3	YNR007C	MAK32	P23060	363 aa		3.33	□□□□□ -1.88
ATG3	YNR007C	YCP4	P25349	247 aa	Known RBP	3.33	□□□□□ -1.88
ATG3	YNR007C	PWP2	P25635	923 aa	Known RBP	3.33	□□□□□ -1.88
ATG3	YNR007C	PET309	P32522	965 aa	Predicted RBP	3.33	□□□□□ -1.88
ATG3	YNR007C	GDA1	P32621	518 aa		3.33	□□□□□ -1.88
ATG3	YNR007C	ERG7	P38604	731 aa		3.33	□□□□□ -1.88
ATG3	YNR007C	OSH3	P38713	996 aa	Known RBP	3.33	□□□□□ -1.88
ATG3	YNR007C	YNG2	P38806	282 aa	Known RBP	3.33	□□□□□ -1.88
ATG3	YNR007C	EAF5	P39995	279 aa		3.33	□□□□□ -1.88
ATG3	YNR007C	PSF2	P40359	213 aa		3.33	□□□□□ -1.88
ATG3	YNR007C	LAS21	P40367	830 aa		3.33	□□□□□ -1.88
ATG3	YNR007C	CIR1	P42940	261 aa		3.33	□□□□□ -1.88
ATG3	YNR007C	MDR1	P53258	950 aa		3.33	□□□□□ -1.88
ATG3	YNR007C	RPL15B	P54780	204 aa	Predicted RBP	3.33	□□□□□ -1.88
ATG3	YNR007C	ECM16	Q04217	1267 aa	Known RBP	3.33	□□□□□ -1.88
ATG3	YNR007C	SRL1	Q08673	210 aa		3.33	□□□□□ -1.88
ATG3	YNR007C	BUD7	Q08754	746 aa		3.33	□□□□□ -1.88
ATG3	YNR007C	NUR1	Q12066	484 aa		3.33	□□□□□ -1.88
ATG3	YNR007C	CFT2	Q12102	859 aa	Predicted RBP	3.33	□□□□□ -1.88
ATG3	YNR007C	HOS1	Q12214	470 aa		3.33	□□□□□ -1.88
ATG3	YNR007C	ARP7	Q12406	477 aa		3.33	□□□□□ -1.88
ATG3	YNR007C	VAS1	P07806	1104 aa	Known RBP	3.32	□□□□□ -1.88
ATG3	YNR007C	AIM17	P23180	465 aa	Known RBP	3.32	□□□□□ -1.88
ATG3	YNR007C	CDC60	P26637	1090 aa	Known RBP	3.32	□□□□□ -1.88
ATG3	YNR007C	ATO2	P32907	282 aa		3.32	□□□□□ -1.88
ATG3	YNR007C	VPS24	P36095	224 aa	Known RBP	3.32	□□□□□ -1.88
ATG3	YNR007C	STV1	P37296	890 aa		3.32	□□□□□ -1.88
ATG3	YNR007C	CST26	P38226	397 aa		3.32	□□□□□ -1.88
ATG3	YNR007C	FTH1	P38310	465 aa		3.32	□□□□□ -1.88
ATG3	YNR007C	CCT4	P39078	528 aa	Known RBP	3.32	□□□□□ -1.88
ATG3	YNR007C	RAD26	P40352	1085 aa		3.32	□□□□□ -1.88
ATG3	YNR007C	MAD2	P40958	196 aa		3.32	□□□□□ -1.88
ATG3	YNR007C	MLC1	P53141	149 aa		3.32	□□□□□ -1.88
ATG3	YNR007C	SNU56	Q03782	492 aa	Known RBP	3.32	□□□□□ -1.88
ATG3	YNR007C	CSI1	Q04368	295 aa		3.32	□□□□□ -1.88
ATG3	YNR007C	ICL2	Q12031	575 aa		3.32	□□□□□ -1.88
ATG3	YNR007C	YPT1	P01123	206 aa	Known RBP	3.31	□□□□□ -1.88
ATG3	YNR007C	ILS1	P09436	1072 aa	Known RBP	3.31	□□□□□ -1.88
ATG3	YNR007C	SEC18	P18759	758 aa	Known RBP	3.31	□□□□□ -1.88
ATG3	YNR007C	SUI2	P20459	304 aa	Known RBP	3.31	□□□□□ -1.88
ATG3	YNR007C	DPB3	P27344	201 aa		3.31	□□□□□ -1.88
ATG3	YNR007C	GCD7	P32502	381 aa	Predicted RBP	3.31	□□□□□ -1.88
ATG3	YNR007C	RAD24	P32641	659 aa		3.31	□□□□□ -1.88
ATG3	YNR007C	PTH2	P34222	208 aa		3.31	□□□□□ -1.88
ATG3	YNR007C	PTK1	P36002	662 aa	Predicted RBP	3.31	□□□□□ -1.88
ATG3	YNR007C	YBL028C	P38202	106 aa		3.31	□□□□□ -1.88
ATG3	YNR007C	IMD2	P38697	523 aa	Known RBP	3.31	□□□□□ -1.88

Retrieved 100 of 5,963 RNA–protein pairs in 32.9 ms