RNA–Protein interactions for RNA: YNL163C

RIA1, Transcript of Cytoplasmic GTPase/eEF2-like factor involved in ribosomal biogenesis, yeast

Gene RIA1, Length 3,333 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIA1	YNL163C	YML083C	Q04526	418 aa		4.25	□□□□□ -1.73
RIA1	YNL163C	TDA5	Q06417	326 aa	Known RBP	4.25	□□□□□ -1.73
RIA1	YNL163C	BI3	Q9ZZW7	517 aa		4.25	□□□□□ -1.73
RIA1	YNL163C	TPK1	P06244	397 aa		4.24	□□□□□ -1.73
RIA1	YNL163C	PHO8	P11491	566 aa		4.24	□□□□□ -1.73
RIA1	YNL163C	PMS1	P14242	873 aa		4.24	□□□□□ -1.73
RIA1	YNL163C	MET16	P18408	261 aa	Predicted RBP	4.24	□□□□□ -1.73
RIA1	YNL163C	VPS33	P20795	691 aa		4.24	□□□□□ -1.73
RIA1	YNL163C	PAT1	P25644	796 aa	Known RBP	4.24	□□□□□ -1.73
RIA1	YNL163C	SEC21	P32074	935 aa	Known RBP	4.24	□□□□□ -1.73
RIA1	YNL163C	MMS21	P38632	267 aa		4.24	□□□□□ -1.73
RIA1	YNL163C	SEO1	P39709	593 aa		4.24	□□□□□ -1.73
RIA1	YNL163C	EFM3	P47163	339 aa		4.24	□□□□□ -1.73
RIA1	YNL163C	PSP1	P50896	841 aa	Known RBP	4.24	□□□□□ -1.73
RIA1	YNL163C	YGL108C	P53139	140 aa		4.24	□□□□□ -1.73
RIA1	YNL163C	SED5	Q01590	340 aa		4.24	□□□□□ -1.73
RIA1	YNL163C	GRX5	Q02784	150 aa		4.24	□□□□□ -1.73
RIA1	YNL163C	YOL159C	Q08300	171 aa		4.24	□□□□□ -1.73
RIA1	YNL163C	PRC1	P00729	532 aa		4.24	□□□□□ -1.73
RIA1	YNL163C	MET17	P06106	444 aa		4.24	□□□□□ -1.73
RIA1	YNL163C	HSP60	P19882	572 aa	Known RBP	4.24	□□□□□ -1.73
RIA1	YNL163C	DRE2	P36152	348 aa		4.24	□□□□□ -1.73
RIA1	YNL163C	TBS1	P38114	1094 aa		4.24	□□□□□ -1.73
RIA1	YNL163C	YBL029W	P38201	376 aa		4.24	□□□□□ -1.73
RIA1	YNL163C	PCA1	P38360	1216 aa		4.24	□□□□□ -1.73
RIA1	YNL163C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
RIA1	YNL163C	ORC5	P50874	479 aa		4.24	□□□□□ -1.73
RIA1	YNL163C	MIG2	P53035	382 aa		4.24	□□□□□ -1.73
RIA1	YNL163C	YGR127W	P53275	312 aa		4.24	□□□□□ -1.73
RIA1	YNL163C	GPI1	P53306	609 aa		4.24	□□□□□ -1.73
RIA1	YNL163C	HMO1	Q03973	246 aa	Known RBP	4.24	□□□□□ -1.73
RIA1	YNL163C	CRN1	Q06440	651 aa		4.24	□□□□□ -1.73
RIA1	YNL163C	RSC2	Q06488	889 aa		4.24	□□□□□ -1.73
RIA1	YNL163C	HUA2	Q12134	243 aa		4.24	□□□□□ -1.73
RIA1	YNL163C	GIS3	Q12418	502 aa		4.24	□□□□□ -1.73
RIA1	YNL163C	YMR030W-A	Q3E760	96 aa		4.24	□□□□□ -1.73
RIA1	YNL163C	GID7	P25569	745 aa		4.24	□□□□□ -1.73
RIA1	YNL163C	NTG1	P31378	399 aa		4.24	□□□□□ -1.73
RIA1	YNL163C	HIR2	P32480	875 aa		4.24	□□□□□ -1.73
RIA1	YNL163C	GCD11	P32481	527 aa	Known RBP	4.24	□□□□□ -1.73
RIA1	YNL163C	VPS21	P36017	210 aa	Known RBP	4.24	□□□□□ -1.73
RIA1	YNL163C	KAP104	P38217	918 aa	Known RBP	4.24	□□□□□ -1.73
RIA1	YNL163C	ECM10	P39987	644 aa		4.24	□□□□□ -1.73
RIA1	YNL163C	SCC4	P40090	624 aa		4.24	□□□□□ -1.73
RIA1	YNL163C	SNL1	P40548	159 aa		4.24	□□□□□ -1.73
RIA1	YNL163C	RPS12	P48589	143 aa	Known RBP	4.24	□□□□□ -1.73
RIA1	YNL163C	AIF1	P52923	378 aa		4.24	□□□□□ -1.73
RIA1	YNL163C	CUL3	P53202	744 aa		4.24	□□□□□ -1.73
RIA1	YNL163C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
RIA1	YNL163C	TRS130	Q03660	1102 aa		4.24	□□□□□ -1.73
RIA1	YNL163C	RKM2	Q03942	479 aa		4.24	□□□□□ -1.73
RIA1	YNL163C	SHS1	Q07657	551 aa		4.24	□□□□□ -1.73
RIA1	YNL163C	GET4	Q12125	312 aa		4.24	□□□□□ -1.73
RIA1	YNL163C	HTZ1	Q12692	134 aa	Known RBP	4.24	□□□□□ -1.73
RIA1	YNL163C	RSR1	P13856	272 aa		4.23	□□□□□ -1.73
RIA1	YNL163C	SEC15	P22224	910 aa		4.23	□□□□□ -1.73
RIA1	YNL163C	ADK2	P26364	225 aa		4.23	□□□□□ -1.73
RIA1	YNL163C	RNP1	P32385	249 aa		4.23	□□□□□ -1.73
RIA1	YNL163C	UTR2	P32623	467 aa		4.23	□□□□□ -1.73
RIA1	YNL163C	TOM20	P35180	183 aa		4.23	□□□□□ -1.73
RIA1	YNL163C	NMD3	P38861	518 aa	Known RBP	4.23	□□□□□ -1.73
RIA1	YNL163C	MIT1	P40002	666 aa		4.23	□□□□□ -1.73
RIA1	YNL163C	ARF3	P40994	183 aa	RIP-Chip data	4.23	□□□□□ -1.73	not detected
RIA1	YNL163C	ELP2	P42935	788 aa		4.23	□□□□□ -1.73
RIA1	YNL163C	YGL176C	P46945	554 aa		4.23	□□□□□ -1.73
RIA1	YNL163C	POL31	P46957	487 aa		4.23	□□□□□ -1.73
RIA1	YNL163C	MDE1	P47095	244 aa		4.23	□□□□□ -1.73
RIA1	YNL163C	GNP1	P48813	663 aa		4.23	□□□□□ -1.73
RIA1	YNL163C	YGR266W	P53326	701 aa		4.23	□□□□□ -1.73
RIA1	YNL163C	NHX1	Q04121	633 aa		4.23	□□□□□ -1.73
RIA1	YNL163C	DYN3	Q04949	312 aa		4.23	□□□□□ -1.73
RIA1	YNL163C	DNL4	Q08387	944 aa	Predicted RBP	4.23	□□□□□ -1.73
RIA1	YNL163C	TRP3	P00937	484 aa		4.23	□□□□□ -1.73
RIA1	YNL163C	MF(ALPHA)1	P01149	165 aa		4.23	□□□□□ -1.73
RIA1	YNL163C	TUB3	P09734	445 aa	Known RBP	4.23	□□□□□ -1.73
RIA1	YNL163C	YCR015C	P25616	317 aa		4.23	□□□□□ -1.73
RIA1	YNL163C	DYS1	P38791	387 aa		4.23	□□□□□ -1.73
RIA1	YNL163C	NPP2	P39997	493 aa		4.23	□□□□□ -1.73
RIA1	YNL163C	YIL054W	P40524	105 aa		4.23	□□□□□ -1.73
RIA1	YNL163C	FIG4	P42837	879 aa		4.23	□□□□□ -1.73
RIA1	YNL163C	MET12	P46151	657 aa		4.23	□□□□□ -1.73
RIA1	YNL163C	MSE1	P48525	536 aa		4.23	□□□□□ -1.73
RIA1	YNL163C	RAI1	P53063	387 aa	Known RBP	4.23	□□□□□ -1.73
RIA1	YNL163C	RTT102	P53330	157 aa		4.23	□□□□□ -1.73
RIA1	YNL163C	YNL134C	P53912	376 aa	Known RBP	4.23	□□□□□ -1.73
RIA1	YNL163C	NGL2	Q03264	515 aa	Known RBP	4.23	□□□□□ -1.73
RIA1	YNL163C	YDR239C	Q03780	787 aa		4.23	□□□□□ -1.73
RIA1	YNL163C	RAD30	Q04049	632 aa		4.23	□□□□□ -1.73
RIA1	YNL163C	APC5	Q08683	685 aa		4.23	□□□□□ -1.73
RIA1	YNL163C	ZPS1	Q12512	249 aa		4.23	□□□□□ -1.73
RIA1	YNL163C	ECM3	Q99252	613 aa		4.23	□□□□□ -1.73
RIA1	YNL163C	ARG81	P05085	880 aa		4.23	□□□□□ -1.73
RIA1	YNL163C	CCA1	P21269	546 aa		4.23	□□□□□ -1.73
RIA1	YNL163C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
RIA1	YNL163C	YCL068C	P25593	260 aa		4.23	□□□□□ -1.73
RIA1	YNL163C	AIM26	P32858	118 aa		4.23	□□□□□ -1.73
RIA1	YNL163C	RIM2	P38127	377 aa		4.23	□□□□□ -1.73
RIA1	YNL163C	ZAP1	P47043	880 aa		4.23	□□□□□ -1.73
RIA1	YNL163C	HAM1	P47119	197 aa	Known RBP	4.23	□□□□□ -1.73
RIA1	YNL163C	YNL146W	P53906	100 aa		4.23	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 51.9 ms