RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A PAP2P53632 584 aaKnown RBP3.95□□□□□ -1.78
YSF3YNL138W-A ESF2P53743 316 aaKnown RBP3.95□□□□□ -1.78
YSF3YNL138W-A RAD33Q04231 177 aa3.95□□□□□ -1.78
YSF3YNL138W-A RRP6Q12149 733 aaKnown RBP3.95□□□□□ -1.78
YSF3YNL138W-A PIF1P07271 859 aa3.94□□□□□ -1.78
YSF3YNL138W-A POL3P15436 1097 aa3.94□□□□□ -1.78
YSF3YNL138W-A MDM10P18409 493 aa3.94□□□□□ -1.78
YSF3YNL138W-A SIR1P21691 654 aa3.94□□□□□ -1.78
YSF3YNL138W-A MSH1P25846 959 aa3.94□□□□□ -1.78
YSF3YNL138W-A LNP1P38878 278 aa3.94□□□□□ -1.78
YSF3YNL138W-A SPC72P39723 622 aa3.94□□□□□ -1.78
YSF3YNL138W-A OPT1P40897 799 aa3.94□□□□□ -1.78
YSF3YNL138W-A ATG36P46983 293 aa3.94□□□□□ -1.78
YSF3YNL138W-A YML053CQ04978 212 aa3.94□□□□□ -1.78
YSF3YNL138W-A AIM6Q07716 390 aa3.94□□□□□ -1.78
YSF3YNL138W-A YER175W-AQ8TGU4 54 aa3.94□□□□□ -1.78
YSF3YNL138W-A MOT1P32333 1867 aa3.94□□□□□ -1.78
YSF3YNL138W-A ADE3P07245 946 aaKnown RBP3.93□□□□□ -1.78
YSF3YNL138W-A RIT1P23796 513 aa3.93□□□□□ -1.78
YSF3YNL138W-A MCM3P24279 971 aaKnown RBP3.93□□□□□ -1.78
YSF3YNL138W-A RRP43P25359 394 aaPredicted RBP3.93□□□□□ -1.78
YSF3YNL138W-A RPT3P33298 428 aaKnown RBP3.93□□□□□ -1.78
YSF3YNL138W-A RTR1P40084 226 aaPredicted RBP3.93□□□□□ -1.78
YSF3YNL138W-A YTA12P40341 825 aa3.93□□□□□ -1.78
YSF3YNL138W-A HRD3Q05787 833 aa3.93□□□□□ -1.78
YSF3YNL138W-A ACC1Q00955 2233 aaKnown RBP3.93□□□□□ -1.78
YSF3YNL138W-A CHO2P05374 869 aaKnown RBP3.92□□□□□ -1.78
YSF3YNL138W-A APA1P16550 321 aaKnown RBP3.92□□□□□ -1.78
YSF3YNL138W-A APN1P22936 367 aa3.92□□□□□ -1.78
YSF3YNL138W-A MBR1P23493 339 aa3.92□□□□□ -1.78
YSF3YNL138W-A RGT1P32862 1170 aa3.92□□□□□ -1.78
YSF3YNL138W-A NOC2P39744 710 aaKnown RBP3.92□□□□□ -1.78
YSF3YNL138W-A SAP1P39955 897 aaKnown RBP3.92□□□□□ -1.78
YSF3YNL138W-A MAM1P40065 302 aa3.92□□□□□ -1.78
YSF3YNL138W-A VPS27P40343 622 aaKnown RBP3.92□□□□□ -1.78
YSF3YNL138W-A CAB2P40506 365 aa3.92□□□□□ -1.78
YSF3YNL138W-A SAE2P46946 345 aa3.92□□□□□ -1.78
YSF3YNL138W-A RIM13Q03792 727 aa3.92□□□□□ -1.78
YSF3YNL138W-A EIS1Q05050 843 aaKnown RBP3.92□□□□□ -1.78
YSF3YNL138W-A IWR1Q07532 353 aaPredicted RBP3.92□□□□□ -1.78
YSF3YNL138W-A CYK3Q07533 885 aa3.92□□□□□ -1.78
YSF3YNL138W-A YDL242WQ07746 117 aa3.92□□□□□ -1.78
YSF3YNL138W-A LCB4Q12246 624 aa3.92□□□□□ -1.78
YSF3YNL138W-A FRE7Q12333 620 aa3.92□□□□□ -1.78
YSF3YNL138W-A SAC3P46674 1301 aa3.92□□□□□ -1.78
YSF3YNL138W-A SUP35P05453 685 aaKnown RBP3.91□□□□□ -1.78
YSF3YNL138W-A POT1P27796 417 aaKnown RBP RIP-Chip data3.91□□□□□ -1.78not detected
YSF3YNL138W-A LAS21P40367 830 aa3.91□□□□□ -1.78
YSF3YNL138W-A SKP2P42843 763 aa3.91□□□□□ -1.78
YSF3YNL138W-A BST1P43571 1029 aa3.91□□□□□ -1.78
YSF3YNL138W-A COG2P53271 262 aa3.91□□□□□ -1.78
YSF3YNL138W-A CPR6P53691 371 aaKnown RBP3.91□□□□□ -1.78
YSF3YNL138W-A ATP23P53722 227 aa3.91□□□□□ -1.78
YSF3YNL138W-A MYO1P08964 1928 aa3.91□□□□□ -1.78
YSF3YNL138W-A PGK1P00560 416 aaKnown RBP3.9□□□□□ -1.79
YSF3YNL138W-A PGI1P12709 554 aaKnown RBP3.9□□□□□ -1.79
YSF3YNL138W-A GSY2P27472 705 aa3.9□□□□□ -1.79
YSF3YNL138W-A URK1P27515 501 aa3.9□□□□□ -1.79
YSF3YNL138W-A ARP2P32381 391 aaKnown RBP3.9□□□□□ -1.79
YSF3YNL138W-A YBL028CP38202 106 aa3.9□□□□□ -1.79
YSF3YNL138W-A YBR138CP38277 524 aa3.9□□□□□ -1.79
YSF3YNL138W-A RPT2P40327 437 aaKnown RBP3.9□□□□□ -1.79
YSF3YNL138W-A NOP2P40991 618 aaKnown RBP3.9□□□□□ -1.79
YSF3YNL138W-A UBX4P54730 416 aa3.9□□□□□ -1.79
YSF3YNL138W-A PLM2Q04383 521 aa3.9□□□□□ -1.79
YSF3YNL138W-A RDL1Q12305 139 aaKnown RBP3.9□□□□□ -1.79
YSF3YNL138W-A CCH1P50077 2039 aa3.9□□□□□ -1.79
YSF3YNL138W-A VMA2P16140 517 aaKnown RBP3.89□□□□□ -1.79
YSF3YNL138W-A PPZ1P26570 692 aa3.89□□□□□ -1.79
YSF3YNL138W-A FMP10P40098 244 aa3.89□□□□□ -1.79
YSF3YNL138W-A TPM2P40414 161 aa3.89□□□□□ -1.79
YSF3YNL138W-A YFH7P43591 353 aa3.89□□□□□ -1.79
YSF3YNL138W-A TAM41P53230 385 aa3.89□□□□□ -1.79
YSF3YNL138W-A YPL108WQ02872 168 aaPredicted RBP3.89□□□□□ -1.79
YSF3YNL138W-A ATG21Q02887 496 aa3.89□□□□□ -1.79
YSF3YNL138W-A ARA2Q04212 335 aa3.89□□□□□ -1.79
YSF3YNL138W-A SEG1Q04279 960 aa3.89□□□□□ -1.79
YSF3YNL138W-A EMI2Q04409 500 aaKnown RBP3.89□□□□□ -1.79
YSF3YNL138W-A BSP1Q06604 576 aa3.89□□□□□ -1.79
YSF3YNL138W-A SUL2Q12325 893 aa3.89□□□□□ -1.79
YSF3YNL138W-A YLR111WQ12528 110 aa3.89□□□□□ -1.79
YSF3YNL138W-A FKS1P38631 1876 aaKnown RBP3.89□□□□□ -1.79
YSF3YNL138W-A MIS1P09440 975 aaKnown RBP3.88□□□□□ -1.79
YSF3YNL138W-A SNF3P10870 884 aa3.88□□□□□ -1.79
YSF3YNL138W-A PHO81P17442 1178 aa3.88□□□□□ -1.79
YSF3YNL138W-A APD1P38281 316 aa3.88□□□□□ -1.79
YSF3YNL138W-A ERC1P38767 581 aa3.88□□□□□ -1.79
YSF3YNL138W-A PUG1P40100 303 aa3.88□□□□□ -1.79
YSF3YNL138W-A XBP1P40489 647 aa3.88□□□□□ -1.79
YSF3YNL138W-A ORM2Q06144 216 aa3.88□□□□□ -1.79
YSF3YNL138W-A SPN1Q06505 410 aaPredicted RBP3.88□□□□□ -1.79
YSF3YNL138W-A PNO1Q99216 274 aaKnown RBP3.88□□□□□ -1.79
YSF3YNL138W-A KRS1P15180 591 aaKnown RBP3.87□□□□□ -1.79
YSF3YNL138W-A NCP1P16603 691 aaKnown RBP3.87□□□□□ -1.79
YSF3YNL138W-A KGD2P19262 463 aaPredicted RBP3.87□□□□□ -1.79
YSF3YNL138W-A PDE1P22434 369 aa3.87□□□□□ -1.79
YSF3YNL138W-A CLB4P24871 460 aa3.87□□□□□ -1.79
YSF3YNL138W-A SIP1P32578 815 aa3.87□□□□□ -1.79
YSF3YNL138W-A BEM3P32873 1128 aa3.87□□□□□ -1.79
YSF3YNL138W-A IMD2P38697 523 aaKnown RBP3.87□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms