RNA–Protein interactions for RNA: YNL032W

SIW14, Transcript of Tyrosine phosphatase involved in actin organization and endocytosis, yeast

Gene SIW14, Length 846 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIW14	YNL032W	RIM1	P32445	135 aa	Known RBP	4.17	□□□□□ -1.74
SIW14	YNL032W	EFB1	P32471	206 aa	Known RBP	4.17	□□□□□ -1.74
SIW14	YNL032W	YME2	P32843	850 aa		4.17	□□□□□ -1.74
SIW14	YNL032W	BUD2	P33314	1104 aa		4.17	□□□□□ -1.74
SIW14	YNL032W	YBR184W	P38299	523 aa		4.17	□□□□□ -1.74
SIW14	YNL032W	SMF2	P38778	549 aa		4.17	□□□□□ -1.74
SIW14	YNL032W	CKB2	P38930	258 aa		4.17	□□□□□ -1.74
SIW14	YNL032W	LYS9	P38999	446 aa		4.17	□□□□□ -1.74
SIW14	YNL032W	SAH1	P39954	449 aa	Known RBP	4.17	□□□□□ -1.74
SIW14	YNL032W	EAF5	P39995	279 aa		4.17	□□□□□ -1.74
SIW14	YNL032W	SEC28	P40509	296 aa	Known RBP	4.17	□□□□□ -1.74
SIW14	YNL032W	IAH1	P41734	238 aa		4.17	□□□□□ -1.74
SIW14	YNL032W	YJL107C	P42947	387 aa		4.17	□□□□□ -1.74
SIW14	YNL032W	VMA10	P48836	114 aa	Known RBP	4.17	□□□□□ -1.74
SIW14	YNL032W	CTR1	P49573	406 aa		4.17	□□□□□ -1.74
SIW14	YNL032W	ORC5	P50874	479 aa		4.17	□□□□□ -1.74
SIW14	YNL032W	PAN2	P53010	1115 aa	Predicted RBP	4.17	□□□□□ -1.74
SIW14	YNL032W	MND1	P53102	219 aa		4.17	□□□□□ -1.74
SIW14	YNL032W	RRT6	P53117	311 aa	Predicted RBP	4.17	□□□□□ -1.74
SIW14	YNL032W	NMA2	P53204	395 aa		4.17	□□□□□ -1.74
SIW14	YNL032W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
SIW14	YNL032W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
SIW14	YNL032W	NAN1	Q02931	896 aa	Known RBP	4.17	□□□□□ -1.74
SIW14	YNL032W	DUS3	Q06053	668 aa	Known RBP	4.17	□□□□□ -1.74
SIW14	YNL032W	ADY3	Q07732	790 aa		4.17	□□□□□ -1.74
SIW14	YNL032W	AIM39	Q08223	395 aa		4.17	□□□□□ -1.74
SIW14	YNL032W	CUE5	Q08412	411 aa	Known RBP	4.17	□□□□□ -1.74
SIW14	YNL032W	SNX3	Q08826	162 aa	Known RBP	4.17	□□□□□ -1.74
SIW14	YNL032W	YLR053C	Q12026	108 aa		4.17	□□□□□ -1.74
SIW14	YNL032W	YLL056C	Q12177	298 aa		4.17	□□□□□ -1.74
SIW14	YNL032W	HOS1	Q12214	470 aa		4.17	□□□□□ -1.74
SIW14	YNL032W	RIB2	Q12362	591 aa	Known RBP	4.17	□□□□□ -1.74
SIW14	YNL032W	KCS1	Q12494	1050 aa		4.17	□□□□□ -1.74
SIW14	YNL032W	VPS5	Q92331	675 aa		4.17	□□□□□ -1.74
SIW14	YNL032W	MPH2	P0CD99	609 aa		4.16	□□□□□ -1.74
SIW14	YNL032W	KIN2	P13186	1147 aa	Known RBP	4.16	□□□□□ -1.74
SIW14	YNL032W	HSP60	P19882	572 aa	Known RBP	4.16	□□□□□ -1.74
SIW14	YNL032W	CLB3	P24870	427 aa		4.16	□□□□□ -1.74
SIW14	YNL032W	CDC48	P25694	835 aa	Known RBP	4.16	□□□□□ -1.74
SIW14	YNL032W	RPC82	P32349	654 aa		4.16	□□□□□ -1.74
SIW14	YNL032W	CBF2	P32504	956 aa		4.16	□□□□□ -1.74
SIW14	YNL032W	UTR4	P32626	227 aa		4.16	□□□□□ -1.74
SIW14	YNL032W	STE5	P32917	917 aa		4.16	□□□□□ -1.74
SIW14	YNL032W	PEX5	P35056	612 aa		4.16	□□□□□ -1.74
SIW14	YNL032W	CUE2	P36075	443 aa	Known RBP	4.16	□□□□□ -1.74
SIW14	YNL032W	ETR1	P38071	380 aa		4.16	□□□□□ -1.74
SIW14	YNL032W	CTP1	P38152	299 aa		4.16	□□□□□ -1.74
SIW14	YNL032W	YBR259W	P38338	688 aa		4.16	□□□□□ -1.74
SIW14	YNL032W	TSC10	P38342	320 aa		4.16	□□□□□ -1.74
SIW14	YNL032W	DIA4	P38705	446 aa	Predicted RBP	4.16	□□□□□ -1.74
SIW14	YNL032W	UBP6	P43593	499 aa	Known RBP	4.16	□□□□□ -1.74
SIW14	YNL032W	FMP33	P46998	180 aa		4.16	□□□□□ -1.74
SIW14	YNL032W	IML2	P47031	731 aa		4.16	□□□□□ -1.74
SIW14	YNL032W	YJL049W	P47048	450 aa		4.16	□□□□□ -1.74
SIW14	YNL032W	YJR054W	P47114	497 aa		4.16	□□□□□ -1.74
SIW14	YNL032W	NNF1	P47149	201 aa		4.16	□□□□□ -1.74
SIW14	YNL032W	YJR142W	P47173	342 aa		4.16	□□□□□ -1.74
SIW14	YNL032W	GCV2	P49095	1034 aa		4.16	□□□□□ -1.74
SIW14	YNL032W	TAN1	P53072	289 aa	Predicted RBP	4.16	□□□□□ -1.74
SIW14	YNL032W	GTF1	P53260	183 aa	Predicted RBP	4.16	□□□□□ -1.74
SIW14	YNL032W	COS6	P53344	381 aa		4.16	□□□□□ -1.74
SIW14	YNL032W	SRP1	Q02821	542 aa	Known RBP	4.16	□□□□□ -1.74
SIW14	YNL032W	TRS130	Q03660	1102 aa		4.16	□□□□□ -1.74
SIW14	YNL032W	TAF11	Q04226	346 aa		4.16	□□□□□ -1.74
SIW14	YNL032W	YDR278C	Q05612	105 aa		4.16	□□□□□ -1.74
SIW14	YNL032W	ADE13	Q05911	482 aa	Known RBP	4.16	□□□□□ -1.74
SIW14	YNL032W	ATG17	Q06410	417 aa		4.16	□□□□□ -1.74
SIW14	YNL032W	YDL121C	Q07541	149 aa		4.16	□□□□□ -1.74
SIW14	YNL032W	TPO1	Q07824	586 aa		4.16	□□□□□ -1.74
SIW14	YNL032W	PEX15	Q08215	383 aa		4.16	□□□□□ -1.74
SIW14	YNL032W	YLL058W	Q12198	575 aa		4.16	□□□□□ -1.74
SIW14	YNL032W	RUP1	Q12242	671 aa		4.16	□□□□□ -1.74
SIW14	YNL032W	ASP3-2	P0CX77	362 aa		4.15	□□□□□ -1.75
SIW14	YNL032W	ASP3-3	P0CX78	362 aa		4.15	□□□□□ -1.75
SIW14	YNL032W	ASP3-4	P0CX79	362 aa		4.15	□□□□□ -1.75
SIW14	YNL032W	ASP3-1	P0CZ17	362 aa		4.15	□□□□□ -1.75
SIW14	YNL032W	ADE2	P21264	571 aa	Known RBP	4.15	□□□□□ -1.75
SIW14	YNL032W	AMD2	P22580	549 aa		4.15	□□□□□ -1.75
SIW14	YNL032W	EMC1	P25574	760 aa		4.15	□□□□□ -1.75
SIW14	YNL032W	AAD3	P25612	363 aa		4.15	□□□□□ -1.75
SIW14	YNL032W	MSH2	P25847	964 aa		4.15	□□□□□ -1.75
SIW14	YNL032W	MEI4	P29467	408 aa		4.15	□□□□□ -1.75
SIW14	YNL032W	GPI10	P30777	616 aa		4.15	□□□□□ -1.75
SIW14	YNL032W	BEM3	P32873	1128 aa		4.15	□□□□□ -1.75
SIW14	YNL032W	SWE1	P32944	819 aa		4.15	□□□□□ -1.75
SIW14	YNL032W	NUP120	P35729	1037 aa		4.15	□□□□□ -1.75
SIW14	YNL032W	YKL151C	P36059	337 aa		4.15	□□□□□ -1.75
SIW14	YNL032W	REG2	P38232	338 aa		4.15	□□□□□ -1.75
SIW14	YNL032W	OTU2	P38747	307 aa	Known RBP	4.15	□□□□□ -1.75
SIW14	YNL032W	ERC1	P38767	581 aa		4.15	□□□□□ -1.75
SIW14	YNL032W	YHR054C	P38780	354 aa		4.15	□□□□□ -1.75
SIW14	YNL032W	KHA1	P40309	873 aa		4.15	□□□□□ -1.75
SIW14	YNL032W	PFK26	P40433	827 aa	Known RBP	4.15	□□□□□ -1.75
SIW14	YNL032W	CCT7	P42943	550 aa	Known RBP	4.15	□□□□□ -1.75
SIW14	YNL032W	RFX1	P48743	811 aa		4.15	□□□□□ -1.75
SIW14	YNL032W	AZR1	P50080	613 aa		4.15	□□□□□ -1.75
SIW14	YNL032W	NUP84	P52891	726 aa		4.15	□□□□□ -1.75
SIW14	YNL032W	MRM2	P53123	320 aa		4.15	□□□□□ -1.75
SIW14	YNL032W	YGL036W	P53185	909 aa	Predicted RBP	4.15	□□□□□ -1.75
SIW14	YNL032W	PXR1	P53335	271 aa	Predicted RBP	4.15	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms