RNA–Protein interactions for RNA: YMR075W

RCO1, Transcript of Essential component of the Rpd3S histone deacetylase complex, yeast

Gene RCO1, Length 2,055 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCO1	YMR075W	PHO3	P24031	467 aa		0.56	□□□□□ -2.32
RCO1	YMR075W	YCR006C	P25350	157 aa		0.56	□□□□□ -2.32
RCO1	YMR075W	LAC1	P28496	418 aa		0.56	□□□□□ -2.32
RCO1	YMR075W	STV1	P37296	890 aa		0.56	□□□□□ -2.32
RCO1	YMR075W	ERC1	P38767	581 aa		0.56	□□□□□ -2.32
RCO1	YMR075W	NMD2	P38798	1089 aa	Known RBP	0.56	□□□□□ -2.32
RCO1	YMR075W	VPS8	P39702	1274 aa		0.56	□□□□□ -2.32
RCO1	YMR075W	SAW1	P39735	261 aa		0.56	□□□□□ -2.32
RCO1	YMR075W	FAF1	P40546	346 aa	Predicted RBP	0.56	□□□□□ -2.32
RCO1	YMR075W	YPR003C	P53394	754 aa		0.56	□□□□□ -2.32
RCO1	YMR075W	ESF2	P53743	316 aa	Known RBP	0.56	□□□□□ -2.32
RCO1	YMR075W	EAF7	P53911	425 aa	Known RBP	0.56	□□□□□ -2.32
RCO1	YMR075W	MAK10	Q02197	733 aa		0.56	□□□□□ -2.32
RCO1	YMR075W	CTL1	Q03220	320 aa	Known RBP	0.56	□□□□□ -2.32
RCO1	YMR075W	TRS31	Q03337	283 aa		0.56	□□□□□ -2.32
RCO1	YMR075W	VPS64	Q03944	604 aa		0.56	□□□□□ -2.32
RCO1	YMR075W	PHM6	Q05637	104 aa		0.56	□□□□□ -2.32
RCO1	YMR075W	PEX15	Q08215	383 aa		0.56	□□□□□ -2.32
RCO1	YMR075W	TMA17	Q12513	150 aa		0.56	□□□□□ -2.32
RCO1	YMR075W	YER145C-A	A0A023PYF4	145 aa		0.55	□□□□□ -2.32
RCO1	YMR075W	PDE1	P22434	369 aa		0.55	□□□□□ -2.32
RCO1	YMR075W	PDR3	P33200	976 aa		0.55	□□□□□ -2.32
RCO1	YMR075W	FPR3	P38911	411 aa	Known RBP	0.55	□□□□□ -2.32
RCO1	YMR075W	NIT2	P47016	307 aa		0.55	□□□□□ -2.32
RCO1	YMR075W	NPA3	P47122	385 aa		0.55	□□□□□ -2.32
RCO1	YMR075W	TAM41	P53230	385 aa		0.55	□□□□□ -2.32
RCO1	YMR075W	PFA5	Q03289	374 aa		0.55	□□□□□ -2.32
RCO1	YMR075W	YLR049C	Q12110	428 aa		0.55	□□□□□ -2.32
RCO1	YMR075W	VAS1	P07806	1104 aa	Known RBP	0.55	□□□□□ -2.32
RCO1	YMR075W	PRP45	P28004	379 aa	Predicted RBP	0.55	□□□□□ -2.32
RCO1	YMR075W	GCD7	P32502	381 aa	Predicted RBP	0.55	□□□□□ -2.32
RCO1	YMR075W	TGL1	P34163	548 aa		0.55	□□□□□ -2.32
RCO1	YMR075W	IMA5	P40884	581 aa		0.55	□□□□□ -2.32
RCO1	YMR075W	MAD2	P40958	196 aa		0.55	□□□□□ -2.32
RCO1	YMR075W	DUG1	P43616	481 aa	Known RBP	0.55	□□□□□ -2.32
RCO1	YMR075W	PEX14	P53112	341 aa		0.55	□□□□□ -2.32
RCO1	YMR075W	FRE3	Q08905	711 aa		0.55	□□□□□ -2.32
RCO1	YMR075W	ICL2	Q12031	575 aa		0.55	□□□□□ -2.32
RCO1	YMR075W	ADH4	P10127	382 aa		0.54	□□□□□ -2.32
RCO1	YMR075W	SWI4	P25302	1093 aa	Known RBP	0.54	□□□□□ -2.32
RCO1	YMR075W	SDS22	P36047	338 aa		0.54	□□□□□ -2.32
RCO1	YMR075W	TAF5	P38129	798 aa		0.54	□□□□□ -2.32
RCO1	YMR075W	SWD1	P39706	426 aa		0.54	□□□□□ -2.32
RCO1	YMR075W	EMP65	P40085	556 aa		0.54	□□□□□ -2.32
RCO1	YMR075W	POL31	P46957	487 aa		0.54	□□□□□ -2.32
RCO1	YMR075W	TIS11	P47977	285 aa		0.54	□□□□□ -2.32
RCO1	YMR075W	YRB30	P53107	440 aa	Predicted RBP	0.54	□□□□□ -2.32
RCO1	YMR075W	SGF73	P53165	657 aa		0.54	□□□□□ -2.32
RCO1	YMR075W	ADE16	P54113	591 aa	Known RBP	0.54	□□□□□ -2.32
RCO1	YMR075W	RVB2	Q12464	471 aa	Known RBP	0.54	□□□□□ -2.32
RCO1	YMR075W	EDE1	P34216	1381 aa		0.54	□□□□□ -2.32
RCO1	YMR075W	GPA1	P08539	472 aa		0.53	□□□□□ -2.32
RCO1	YMR075W	MRP2	P10663	115 aa	Predicted RBP	0.53	□□□□□ -2.32
RCO1	YMR075W	HEM12	P32347	362 aa	Predicted RBP	0.53	□□□□□ -2.32
RCO1	YMR075W	YBR071W	P38243	211 aa		0.53	□□□□□ -2.32
RCO1	YMR075W	RFC1	P38630	861 aa	Known RBP	0.53	□□□□□ -2.32
RCO1	YMR075W	SSP120	P39931	234 aa	Known RBP	0.53	□□□□□ -2.32
RCO1	YMR075W	TAN1	P53072	289 aa	Predicted RBP	0.53	□□□□□ -2.32
RCO1	YMR075W	YGL081W	P53156	320 aa		0.53	□□□□□ -2.32
RCO1	YMR075W	YPL108W	Q02872	168 aa	Predicted RBP	0.53	□□□□□ -2.32
RCO1	YMR075W	HIM1	Q06674	414 aa		0.53	□□□□□ -2.32
RCO1	YMR075W	ADE3	P07245	946 aa	Known RBP	0.53	□□□□□ -2.32
RCO1	YMR075W	RIT1	P23796	513 aa		0.53	□□□□□ -2.32
RCO1	YMR075W	RFA2	P26754	273 aa	Known RBP	0.53	□□□□□ -2.32
RCO1	YMR075W	AGA1	P32323	725 aa		0.53	□□□□□ -2.32
RCO1	YMR075W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	0.53	□□□□□ -2.32	not detected
RCO1	YMR075W	ADE17	P38009	592 aa	Known RBP	0.53	□□□□□ -2.32
RCO1	YMR075W	UBP13	P38187	747 aa		0.53	□□□□□ -2.32
RCO1	YMR075W	UBP12	P39538	1254 aa		0.53	□□□□□ -2.32
RCO1	YMR075W	CAB2	P40506	365 aa		0.53	□□□□□ -2.32
RCO1	YMR075W	MAD3	P47074	515 aa		0.53	□□□□□ -2.32
RCO1	YMR075W	ASK10	P48361	1146 aa		0.53	□□□□□ -2.32
RCO1	YMR075W	COG6	P53959	839 aa		0.53	□□□□□ -2.32
RCO1	YMR075W	ATG21	Q02887	496 aa		0.53	□□□□□ -2.32
RCO1	YMR075W	AAD4	Q07747	329 aa		0.53	□□□□□ -2.32
RCO1	YMR075W	GRC3	Q07845	632 aa		0.53	□□□□□ -2.32
RCO1	YMR075W	PET122	P10355	254 aa		0.52	□□□□□ -2.33
RCO1	YMR075W	RPB8	P20436	146 aa		0.52	□□□□□ -2.33
RCO1	YMR075W	ENP1	P38333	483 aa	Known RBP	0.52	□□□□□ -2.33
RCO1	YMR075W	CDC1	P40986	491 aa		0.52	□□□□□ -2.33
RCO1	YMR075W	ERR3	P42222	437 aa		0.52	□□□□□ -2.33
RCO1	YMR075W	YGL082W	P53155	381 aa		0.52	□□□□□ -2.33
RCO1	YMR075W	NNF2	P53253	936 aa		0.52	□□□□□ -2.33
RCO1	YMR075W	SWA2	Q06677	668 aa		0.52	□□□□□ -2.33
RCO1	YMR075W	CSR1	Q06705	408 aa	Known RBP	0.52	□□□□□ -2.33
RCO1	YMR075W	CRD1	Q07560	283 aa		0.52	□□□□□ -2.33
RCO1	YMR075W	AIM6	Q07716	390 aa		0.52	□□□□□ -2.33
RCO1	YMR075W	SLX4	Q12098	748 aa		0.52	□□□□□ -2.33
RCO1	YMR075W	MPD2	Q99316	277 aa		0.52	□□□□□ -2.33
RCO1	YMR075W	RAP1	P11938	827 aa		0.52	□□□□□ -2.33
RCO1	YMR075W	MCM4	P30665	933 aa	Known RBP	0.52	□□□□□ -2.33
RCO1	YMR075W	ARP2	P32381	391 aa	Known RBP	0.52	□□□□□ -2.33
RCO1	YMR075W	YNK1	P36010	153 aa	Known RBP	0.52	□□□□□ -2.33
RCO1	YMR075W	LHS1	P36016	881 aa		0.52	□□□□□ -2.33
RCO1	YMR075W	MRPL36	P36531	177 aa		0.52	□□□□□ -2.33
RCO1	YMR075W	YLF2	P38746	405 aa		0.52	□□□□□ -2.33
RCO1	YMR075W	YIL161W	P40449	235 aa	Known RBP	0.52	□□□□□ -2.33
RCO1	YMR075W	YGR210C	P42942	411 aa		0.52	□□□□□ -2.33
RCO1	YMR075W	FOL1	P53848	824 aa		0.52	□□□□□ -2.33
RCO1	YMR075W	MOT3	P54785	490 aa	Known RBP	0.52	□□□□□ -2.33

Retrieved 100 of 5,963 RNA–protein pairs in 102.7 ms