RNA–Protein interactions for RNA: YMR067C

UBX4, Transcript of UBX domain-containing protein that interacts with Cdc48p, yeastyeast

Gene UBX4, Length 1,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX4YMR067C HIS6P40545 261 aa3.24□□□□□ -1.89
UBX4YMR067C HOS2P53096 452 aaPredicted RBP3.24□□□□□ -1.89
UBX4YMR067C ESBP6P53918 673 aa3.24□□□□□ -1.89
UBX4YMR067C YER145C-AA0A023PYF4 145 aa3.23□□□□□ -1.89
UBX4YMR067C GAL1P04385 528 aa3.23□□□□□ -1.89
UBX4YMR067C CDC23P16522 626 aa3.23□□□□□ -1.89
UBX4YMR067C LHS1P36016 881 aa3.23□□□□□ -1.89
UBX4YMR067C GEX2P36173 615 aa3.23□□□□□ -1.89
UBX4YMR067C AAP1P37898 856 aaKnown RBP3.23□□□□□ -1.89
UBX4YMR067C ADE17P38009 592 aaKnown RBP3.23□□□□□ -1.89
UBX4YMR067C EXO84P38261 753 aa3.23□□□□□ -1.89
UBX4YMR067C LEU5P38702 357 aa3.23□□□□□ -1.89
UBX4YMR067C NPR3P38742 1146 aa3.23□□□□□ -1.89
UBX4YMR067C CUL3P53202 744 aa3.23□□□□□ -1.89
UBX4YMR067C ASI1P54074 624 aa3.23□□□□□ -1.89
UBX4YMR067C CTL1Q03220 320 aaKnown RBP3.23□□□□□ -1.89
UBX4YMR067C RTT103Q05543 409 aa3.23□□□□□ -1.89
UBX4YMR067C RRP6Q12149 733 aaKnown RBP3.23□□□□□ -1.89
UBX4YMR067C CBP1P07252 654 aa3.22□□□□□ -1.89
UBX4YMR067C SRP54P20424 541 aaKnown RBP3.22□□□□□ -1.89
UBX4YMR067C CLB4P24871 460 aa3.22□□□□□ -1.89
UBX4YMR067C TOM20P35180 183 aa3.22□□□□□ -1.89
UBX4YMR067C FMP46P36141 133 aaKnown RBP3.22□□□□□ -1.89
UBX4YMR067C MRPL36P36531 177 aa3.22□□□□□ -1.89
UBX4YMR067C YBR138CP38277 524 aa3.22□□□□□ -1.89
UBX4YMR067C PUG1P40100 303 aa3.22□□□□□ -1.89
UBX4YMR067C IAH1P41734 238 aa3.22□□□□□ -1.89
UBX4YMR067C CTK2P46962 323 aa3.22□□□□□ -1.89
UBX4YMR067C ARP10Q04549 284 aa3.22□□□□□ -1.89
UBX4YMR067C RSF1Q05043 376 aa3.22□□□□□ -1.89
UBX4YMR067C HIM1Q06674 414 aa3.22□□□□□ -1.89
UBX4YMR067C GUK1P15454 187 aaKnown RBP3.21□□□□□ -1.9
UBX4YMR067C SAC1P32368 623 aaKnown RBP3.21□□□□□ -1.9
UBX4YMR067C RAD24P32641 659 aa3.21□□□□□ -1.9
UBX4YMR067C SOF1P33750 489 aaKnown RBP3.21□□□□□ -1.9
UBX4YMR067C GRX7P38068 203 aa3.21□□□□□ -1.9
UBX4YMR067C YPK3P38070 525 aa3.21□□□□□ -1.9
UBX4YMR067C UBP13P38187 747 aa3.21□□□□□ -1.9
UBX4YMR067C SEC31P38968 1273 aaKnown RBP3.21□□□□□ -1.9
UBX4YMR067C YJL070CP40361 888 aa3.21□□□□□ -1.9
UBX4YMR067C ASE1P50275 885 aa3.21□□□□□ -1.9
UBX4YMR067C PFA5Q03289 374 aa3.21□□□□□ -1.9
UBX4YMR067C SCW10Q04951 389 aa3.21□□□□□ -1.9
UBX4YMR067C STP3Q05937 343 aa3.21□□□□□ -1.9
UBX4YMR067C YLR352WQ06479 807 aa3.21□□□□□ -1.9
UBX4YMR067C RAP1P11938 827 aa3.2□□□□□ -1.9
UBX4YMR067C KRS1P15180 591 aaKnown RBP3.2□□□□□ -1.9
UBX4YMR067C HNM1P19807 563 aa3.2□□□□□ -1.9
UBX4YMR067C CLB2P24869 491 aa3.2□□□□□ -1.9
UBX4YMR067C RPN2P32565 945 aaKnown RBP3.2□□□□□ -1.9
UBX4YMR067C NTR2P36118 322 aaPredicted RBP3.2□□□□□ -1.9
UBX4YMR067C ATG27P46989 271 aa3.2□□□□□ -1.9
UBX4YMR067C YNL234WP53857 426 aa3.2□□□□□ -1.9
UBX4YMR067C CSL4P53859 292 aaPredicted RBP3.2□□□□□ -1.9
UBX4YMR067C ATP2P00830 511 aaKnown RBP3.19□□□□□ -1.9
UBX4YMR067C CHO1P08456 276 aa3.19□□□□□ -1.9
UBX4YMR067C PET111P08468 800 aa3.19□□□□□ -1.9
UBX4YMR067C NCP1P16603 691 aaKnown RBP3.19□□□□□ -1.9
UBX4YMR067C PHO81P17442 1178 aa3.19□□□□□ -1.9
UBX4YMR067C TKL1P23254 680 aaKnown RBP3.19□□□□□ -1.9
UBX4YMR067C YHL041WP38730 149 aa3.19□□□□□ -1.9
UBX4YMR067C GIS2P53849 153 aaKnown RBP RIP-Chip data3.19□□□□□ -1.9not detected
UBX4YMR067C CRZ1P53968 678 aa3.19□□□□□ -1.9
UBX4YMR067C CRN1Q06440 651 aa3.19□□□□□ -1.9
UBX4YMR067C YMR230W-AQ3E7B5 62 aa3.19□□□□□ -1.9
UBX4YMR067C MGR1P25573 417 aa3.18□□□□□ -1.9
UBX4YMR067C YCL049CP25577 312 aa3.18□□□□□ -1.9
UBX4YMR067C SEC1P30619 724 aaKnown RBP3.18□□□□□ -1.9
UBX4YMR067C TFC3P34111 1160 aa3.18□□□□□ -1.9
UBX4YMR067C ECM10P39987 644 aa3.18□□□□□ -1.9
UBX4YMR067C SGF73P53165 657 aa3.18□□□□□ -1.9
UBX4YMR067C PMS1P14242 873 aa3.17□□□□□ -1.9
UBX4YMR067C SRB5P32585 307 aa3.17□□□□□ -1.9
UBX4YMR067C PDR3P33200 976 aa3.17□□□□□ -1.9
UBX4YMR067C YIR014WP40570 242 aa3.17□□□□□ -1.9
UBX4YMR067C RTS2P40962 232 aa3.17□□□□□ -1.9
UBX4YMR067C SWP82P43554 623 aa3.17□□□□□ -1.9
UBX4YMR067C RSM28Q03430 361 aa3.17□□□□□ -1.9
UBX4YMR067C EDE1P34216 1381 aa3.16□□□□□ -1.9
UBX4YMR067C TY2A-LR1P0C2J4 438 aa3.16□□□□□ -1.9
UBX4YMR067C TY2A-FP0CX61 438 aa3.16□□□□□ -1.9
UBX4YMR067C TY2A-GR2P0CX62 438 aa3.16□□□□□ -1.9
UBX4YMR067C PGI1P12709 554 aaKnown RBP3.16□□□□□ -1.9
UBX4YMR067C RPB8P20436 146 aa3.16□□□□□ -1.9
UBX4YMR067C MSM1P22438 575 aa3.16□□□□□ -1.9
UBX4YMR067C TY2A-CP25383 438 aa3.16□□□□□ -1.9
UBX4YMR067C CDC15P27636 974 aa3.16□□□□□ -1.9
UBX4YMR067C GAC1P28006 793 aa3.16□□□□□ -1.9
UBX4YMR067C STV1P37296 890 aa3.16□□□□□ -1.9
UBX4YMR067C RFC1P38630 861 aaKnown RBP3.16□□□□□ -1.9
UBX4YMR067C RGI2P40188 164 aa3.16□□□□□ -1.9
UBX4YMR067C IST1P53843 298 aaPredicted RBP3.16□□□□□ -1.9
UBX4YMR067C MAK10Q02197 733 aa3.16□□□□□ -1.9
UBX4YMR067C YMR178WQ03219 274 aaKnown RBP3.16□□□□□ -1.9
UBX4YMR067C TY2A-DR2Q03483 438 aa3.16□□□□□ -1.9
UBX4YMR067C EKI1Q03764 534 aa3.16□□□□□ -1.9
UBX4YMR067C TY2A-BQ12260 438 aa3.16□□□□□ -1.9
UBX4YMR067C TY2A-OR2Q12293 438 aa3.16□□□□□ -1.9
UBX4YMR067C TY2A-DR1Q12392 438 aa3.16□□□□□ -1.9
UBX4YMR067C TY2A-OR1Q12439 438 aa3.16□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 27 ms