RNA–Protein interactions for RNA: YLR247C

IRC20, Transcript of E3 ubiquitin ligase and putative helicase, yeastyeast

Gene IRC20, Length 4,671 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IRC20YLR247C HSF1P10961 833 aa1.84□□□□□ -2.11
IRC20YLR247C KSS1P14681 368 aa1.84□□□□□ -2.11
IRC20YLR247C PFK1P16861 987 aaKnown RBP1.84□□□□□ -2.11
IRC20YLR247C APL1P27351 700 aa1.84□□□□□ -2.11
IRC20YLR247C KIP1P28742 1111 aa1.84□□□□□ -2.11
IRC20YLR247C CDC12P32468 407 aaKnown RBP1.84□□□□□ -2.11
IRC20YLR247C RPT5P33297 434 aaKnown RBP1.84□□□□□ -2.11
IRC20YLR247C MNR2P35724 969 aa1.84□□□□□ -2.11
IRC20YLR247C YKR078WP36158 585 aaKnown RBP1.84□□□□□ -2.11
IRC20YLR247C GIP1P38229 639 aa1.84□□□□□ -2.11
IRC20YLR247C PBY1P38254 753 aa1.84□□□□□ -2.11
IRC20YLR247C YJL206CP39529 758 aa1.84□□□□□ -2.11
IRC20YLR247C PHO90P39535 881 aa1.84□□□□□ -2.11
IRC20YLR247C YER130CP39959 443 aa1.84□□□□□ -2.11
IRC20YLR247C DDI1P40087 428 aa1.84□□□□□ -2.11
IRC20YLR247C SCC4P40090 624 aa1.84□□□□□ -2.11
IRC20YLR247C APS3P47064 194 aa1.84□□□□□ -2.11
IRC20YLR247C YJR030CP47101 745 aa1.84□□□□□ -2.11
IRC20YLR247C SAM37P50110 327 aa1.84□□□□□ -2.11
IRC20YLR247C CPR6P53691 371 aaKnown RBP1.84□□□□□ -2.11
IRC20YLR247C RSC4Q02206 625 aa1.84□□□□□ -2.11
IRC20YLR247C EEB1Q02891 456 aa1.84□□□□□ -2.11
IRC20YLR247C HFD1Q04458 532 aa1.84□□□□□ -2.11
IRC20YLR247C YDR338CQ05497 695 aa1.84□□□□□ -2.11
IRC20YLR247C YDR286CQ05530 114 aa1.84□□□□□ -2.11
IRC20YLR247C NKP2Q06162 153 aa1.84□□□□□ -2.11
IRC20YLR247C YOR059CQ08448 450 aaKnown RBP1.84□□□□□ -2.11
IRC20YLR247C IES4Q08561 116 aa1.84□□□□□ -2.11
IRC20YLR247C YPL216WQ08964 1102 aa1.84□□□□□ -2.11
IRC20YLR247C APL4Q12028 832 aa1.84□□□□□ -2.11
IRC20YLR247C ATG29Q12092 213 aa1.84□□□□□ -2.11
IRC20YLR247C GET4Q12125 312 aa1.84□□□□□ -2.11
IRC20YLR247C GPR1Q12361 961 aa1.84□□□□□ -2.11
IRC20YLR247C ERP4Q12450 207 aa1.84□□□□□ -2.11
IRC20YLR247C KIN28P06242 306 aa1.84□□□□□ -2.12
IRC20YLR247C HTS1P07263 546 aaKnown RBP1.84□□□□□ -2.12
IRC20YLR247C DFR1P07807 211 aaKnown RBP RIP-Chip data1.84□□□□□ -2.12not detected
IRC20YLR247C PHO8P11491 566 aa1.84□□□□□ -2.12
IRC20YLR247C REC107P21651 314 aa1.84□□□□□ -2.12
IRC20YLR247C DPB2P24482 689 aaPredicted RBP1.84□□□□□ -2.12
IRC20YLR247C RNA14P25298 677 aaKnown RBP1.84□□□□□ -2.12
IRC20YLR247C YCR061WP25639 631 aa1.84□□□□□ -2.12
IRC20YLR247C TRK2P28584 889 aa1.84□□□□□ -2.12
IRC20YLR247C CRM1P30822 1084 aaKnown RBP1.84□□□□□ -2.12
IRC20YLR247C HEM12P32347 362 aaPredicted RBP1.84□□□□□ -2.12
IRC20YLR247C COT1P32798 439 aa1.84□□□□□ -2.12
IRC20YLR247C KES1P35844 434 aaKnown RBP1.84□□□□□ -2.12
IRC20YLR247C APT2P36973 181 aa1.84□□□□□ -2.12
IRC20YLR247C RFC3P38629 340 aa1.84□□□□□ -2.12
IRC20YLR247C NPR3P38742 1146 aa1.84□□□□□ -2.12
IRC20YLR247C GAA1P39012 614 aa1.84□□□□□ -2.12
IRC20YLR247C SAH1P39954 449 aaKnown RBP1.84□□□□□ -2.12
IRC20YLR247C MND2P40577 368 aa1.84□□□□□ -2.12
IRC20YLR247C MKT1P40850 830 aaKnown RBP1.84□□□□□ -2.12
IRC20YLR247C FMP32P43557 207 aa1.84□□□□□ -2.12
IRC20YLR247C YGL108CP53139 140 aa1.84□□□□□ -2.12
IRC20YLR247C REG1Q00816 1014 aa1.84□□□□□ -2.12
IRC20YLR247C DIG1Q03063 452 aaKnown RBP1.84□□□□□ -2.12
IRC20YLR247C RLI1Q03195 608 aaKnown RBP1.84□□□□□ -2.12
IRC20YLR247C RAD34Q06665 692 aa1.84□□□□□ -2.12
IRC20YLR247C BER1Q06688 274 aaKnown RBP1.84□□□□□ -2.12
IRC20YLR247C RRP12Q12754 1228 aaKnown RBP1.84□□□□□ -2.12
IRC20YLR247C YBR085C-AO43137 85 aa1.84□□□□□ -2.12
IRC20YLR247C PAB1P04147 577 aaKnown RBP RIP-Chip data1.84□□□□□ -2.12not detected
IRC20YLR247C TSR4P25040 408 aa1.84□□□□□ -2.12
IRC20YLR247C NTG1P31378 399 aa1.84□□□□□ -2.12
IRC20YLR247C WBP1P33767 430 aaKnown RBP1.84□□□□□ -2.12
IRC20YLR247C CTM1P38818 585 aa1.84□□□□□ -2.12
IRC20YLR247C YHR219WP38900 624 aa1.84□□□□□ -2.12
IRC20YLR247C AKR1P39010 764 aa1.84□□□□□ -2.12
IRC20YLR247C MTW1P39731 289 aa1.84□□□□□ -2.12
IRC20YLR247C TPA1P40032 644 aaKnown RBP1.84□□□□□ -2.12
IRC20YLR247C PEX17P40155 199 aa1.84□□□□□ -2.12
IRC20YLR247C OSW5P40219 148 aa1.84□□□□□ -2.12
IRC20YLR247C DPH1P40487 425 aaKnown RBP1.84□□□□□ -2.12
IRC20YLR247C CNN1P43618 361 aa1.84□□□□□ -2.12
IRC20YLR247C YGR149WP48236 432 aa1.84□□□□□ -2.12
IRC20YLR247C PRP31P49704 494 aaPredicted RBP1.84□□□□□ -2.12
IRC20YLR247C RSC1P53236 928 aa1.84□□□□□ -2.12
IRC20YLR247C GTR2P53290 341 aa1.84□□□□□ -2.12
IRC20YLR247C CPR8P53728 308 aa1.84□□□□□ -2.12
IRC20YLR247C NOP13P53883 403 aaKnown RBP RIP-Chip data1.84□□□□□ -2.12not detected
IRC20YLR247C RAD33Q04231 177 aa1.84□□□□□ -2.12
IRC20YLR247C RGC1Q06108 1083 aaKnown RBP1.84□□□□□ -2.12
IRC20YLR247C GAS2Q06135 555 aa1.84□□□□□ -2.12
IRC20YLR247C IRC23Q08416 157 aa1.84□□□□□ -2.12
IRC20YLR247C FRE5Q08908 694 aa1.84□□□□□ -2.12
IRC20YLR247C SLF1Q12034 447 aaKnown RBP1.84□□□□□ -2.12
IRC20YLR247C RIO1Q12196 484 aaKnown RBP1.84□□□□□ -2.12
IRC20YLR247C YVC1Q12324 675 aa1.84□□□□□ -2.12
IRC20YLR247C YBL113CQ7M4S9 792 aa1.84□□□□□ -2.12
IRC20YLR247C ILS1P09436 1072 aaKnown RBP1.83□□□□□ -2.12
IRC20YLR247C KAR1P11927 433 aa1.83□□□□□ -2.12
IRC20YLR247C DBP3P20447 523 aaKnown RBP1.83□□□□□ -2.12
IRC20YLR247C RPC53P25441 422 aa1.83□□□□□ -2.12
IRC20YLR247C PEP3P27801 918 aa1.83□□□□□ -2.12
IRC20YLR247C PET309P32522 965 aaPredicted RBP1.83□□□□□ -2.12
IRC20YLR247C SAC6P32599 642 aaKnown RBP1.83□□□□□ -2.12
IRC20YLR247C YKL069WP36088 180 aa1.83□□□□□ -2.12
IRC20YLR247C TGL4P36165 910 aa1.83□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 9.2 ms