RNA–Protein interactions for RNA: YLR164W

SHH4, Transcript of Putative alternate subunit of succinate dehydrogenase (SDH), yeastyeast

Gene SHH4, Length 507 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH4YLR164W MCP2Q06567 569 aa10.03□□□□□ -0.8
SHH4YLR164W MRH1Q12117 320 aaPredicted RBP10.03□□□□□ -0.8
SHH4YLR164W MSF1P08425 469 aa10.02□□□□□ -0.81
SHH4YLR164W PMA2P19657 947 aa10.02□□□□□ -0.81
SHH4YLR164W CDC10P25342 322 aaKnown RBP10.02□□□□□ -0.81
SHH4YLR164W YJU3P28321 313 aa10.02□□□□□ -0.81
SHH4YLR164W PYK2P52489 506 aaKnown RBP10.02□□□□□ -0.81
SHH4YLR164W FRE4P53746 719 aa10.02□□□□□ -0.81
SHH4YLR164W YMR155WQ03795 547 aa10.02□□□□□ -0.81
SHH4YLR164W YDR131CQ03899 556 aa10.02□□□□□ -0.81
SHH4YLR164W SHE9Q04172 456 aa10.02□□□□□ -0.81
SHH4YLR164W TMA46Q12000 345 aaKnown RBP10.02□□□□□ -0.81
SHH4YLR164W SPE4Q12455 300 aa10.02□□□□□ -0.81
SHH4YLR164W AMD2P22580 549 aa10.01□□□□□ -0.81
SHH4YLR164W MNE1P24720 663 aa10.01□□□□□ -0.81
SHH4YLR164W MRM1P25270 412 aa10.01□□□□□ -0.81
SHH4YLR164W GUT2P32191 649 aa10.01□□□□□ -0.81
SHH4YLR164W PHA2P32452 334 aa10.01□□□□□ -0.81
SHH4YLR164W CTF13P35203 478 aa10.01□□□□□ -0.81
SHH4YLR164W LRG1P35688 1017 aa10.01□□□□□ -0.81
SHH4YLR164W YHR182WP38870 785 aa10.01□□□□□ -0.81
SHH4YLR164W ACO2P39533 789 aa10.01□□□□□ -0.81
SHH4YLR164W FAR3P46671 204 aa10.01□□□□□ -0.81
SHH4YLR164W SIP4P46954 829 aa10.01□□□□□ -0.81
SHH4YLR164W YNL143CP53908 130 aa10.01□□□□□ -0.81
SHH4YLR164W EFM6P53970 246 aa10.01□□□□□ -0.81
SHH4YLR164W YMR102CQ03177 834 aa10.01□□□□□ -0.81
SHH4YLR164W TAF11Q04226 346 aa10.01□□□□□ -0.81
SHH4YLR164W YLR177WQ06251 628 aa10.01□□□□□ -0.81
SHH4YLR164W CRN1Q06440 651 aa10.01□□□□□ -0.81
SHH4YLR164W FLC1Q08967 793 aa10.01□□□□□ -0.81
SHH4YLR164W NUS1Q12063 375 aa10.01□□□□□ -0.81
SHH4YLR164W UBX3Q12229 455 aa10.01□□□□□ -0.81
SHH4YLR164W HIS5P07172 385 aa10□□□□□ -0.81
SHH4YLR164W PUP3P25451 205 aaKnown RBP10□□□□□ -0.81
SHH4YLR164W LIP5P32875 414 aa10□□□□□ -0.81
SHH4YLR164W STE13P33894 931 aa10□□□□□ -0.81
SHH4YLR164W ASK1P35734 292 aa10□□□□□ -0.81
SHH4YLR164W VRP1P37370 817 aa10□□□□□ -0.81
SHH4YLR164W LDB7P38210 180 aa10□□□□□ -0.81
SHH4YLR164W HSM3P38348 480 aa10□□□□□ -0.81
SHH4YLR164W NEM1P38757 446 aa10□□□□□ -0.81
SHH4YLR164W GGA2P38817 585 aaKnown RBP10□□□□□ -0.81
SHH4YLR164W YJR061WP40355 935 aa10□□□□□ -0.81
SHH4YLR164W GLG2P47011 380 aa10□□□□□ -0.81
SHH4YLR164W YJR124CP47159 448 aa10□□□□□ -0.81
SHH4YLR164W FLC3P53121 802 aa10□□□□□ -0.81
SHH4YLR164W SUB1P54000 292 aaKnown RBP10□□□□□ -0.81
SHH4YLR164W LCB5Q06147 687 aaKnown RBP10□□□□□ -0.81
SHH4YLR164W ENT4Q07872 247 aa10□□□□□ -0.81
SHH4YLR164W NOB1Q08444 459 aaKnown RBP10□□□□□ -0.81
SHH4YLR164W YPL247CQ12523 523 aa10□□□□□ -0.81
SHH4YLR164W SEC53P07283 254 aaKnown RBP9.99□□□□□ -0.81
SHH4YLR164W FPR1P20081 114 aaKnown RBP9.99□□□□□ -0.81
SHH4YLR164W EMC1P25574 760 aa9.99□□□□□ -0.81
SHH4YLR164W VAC17P25591 423 aa9.99□□□□□ -0.81
SHH4YLR164W SFP1P32432 683 aa9.99□□□□□ -0.81
SHH4YLR164W TOM20P35180 183 aa9.99□□□□□ -0.81
SHH4YLR164W YSW1P38280 609 aa9.99□□□□□ -0.81
SHH4YLR164W SRP72P38688 640 aaKnown RBP9.99□□□□□ -0.81
SHH4YLR164W ALG8P40351 577 aa9.99□□□□□ -0.81
SHH4YLR164W SER33P40510 469 aa9.99□□□□□ -0.81
SHH4YLR164W GTS1P40956 396 aa9.99□□□□□ -0.81
SHH4YLR164W GYP8P43570 497 aa9.99□□□□□ -0.81
SHH4YLR164W AIF1P52923 378 aa9.99□□□□□ -0.81
SHH4YLR164W NPY1P53164 384 aa9.99□□□□□ -0.81
SHH4YLR164W RPC11Q04307 110 aaPredicted RBP9.99□□□□□ -0.81
SHH4YLR164W YDR109CQ04585 715 aa9.99□□□□□ -0.81
SHH4YLR164W NOT5Q12514 560 aaPredicted RBP9.99□□□□□ -0.81
SHH4YLR164W YMR084WA2P2R3 262 aa9.98□□□□□ -0.81
SHH4YLR164W MLS1P30952 554 aa9.98□□□□□ -0.81
SHH4YLR164W NIP1P32497 812 aaKnown RBP9.98□□□□□ -0.81
SHH4YLR164W PXA2P34230 853 aa9.98□□□□□ -0.81
SHH4YLR164W SQT1P35184 431 aa9.98□□□□□ -0.81
SHH4YLR164W MUP3P38734 546 aa9.98□□□□□ -0.81
SHH4YLR164W DAN4P47179 1161 aa9.98□□□□□ -0.81
SHH4YLR164W TAF6P53040 516 aa9.98□□□□□ -0.81
SHH4YLR164W YNR061CP53747 219 aa9.98□□□□□ -0.81
SHH4YLR164W SPP2Q02521 185 aa9.98□□□□□ -0.81
SHH4YLR164W GSF2Q04697 403 aaKnown RBP9.98□□□□□ -0.81
SHH4YLR164W IRC10Q08118 586 aa9.98□□□□□ -0.81
SHH4YLR164W HRK1Q08732 759 aaKnown RBP9.98□□□□□ -0.81
SHH4YLR164W UBR1P19812 1950 aa9.97□□□□□ -0.81
SHH4YLR164W YPR089WO13585 888 aa9.97□□□□□ -0.81
SHH4YLR164W PRP16P15938 1071 aaPredicted RBP9.97□□□□□ -0.81
SHH4YLR164W GAL11P19659 1081 aa9.97□□□□□ -0.81
SHH4YLR164W TRX2P22803 104 aaKnown RBP9.97□□□□□ -0.81
SHH4YLR164W BRF1P29056 596 aa9.97□□□□□ -0.81
SHH4YLR164W PTM1P32857 523 aa9.97□□□□□ -0.81
SHH4YLR164W TYE7P33122 291 aaPredicted RBP9.97□□□□□ -0.81
SHH4YLR164W YBR259WP38338 688 aa9.97□□□□□ -0.81
SHH4YLR164W HAT2P39984 401 aa9.97□□□□□ -0.81
SHH4YLR164W SET2P46995 733 aaKnown RBP9.97□□□□□ -0.81
SHH4YLR164W SPC105P53148 917 aa9.97□□□□□ -0.81
SHH4YLR164W RCF2P53721 224 aa9.97□□□□□ -0.81
SHH4YLR164W VPS16Q03308 798 aa9.97□□□□□ -0.81
SHH4YLR164W ADY3Q07732 790 aa9.97□□□□□ -0.81
SHH4YLR164W CLP1Q08685 445 aaPredicted RBP9.97□□□□□ -0.81
SHH4YLR164W RAD59Q12223 238 aa9.97□□□□□ -0.81
SHH4YLR164W ICT1Q12385 394 aa9.97□□□□□ -0.81
Retrieved 100 of 5,963 RNA–protein pairs in 70 ms