RNA–Protein interactions for RNA: YLR139C

SLS1, Transcript of Mitochondrial membrane protein, yeast

Gene SLS1, Length 1,932 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLS1	YLR139C	TPM2	P40414	161 aa		4.29	□□□□□ -1.72
SLS1	YLR139C	RPN11	P43588	306 aa	Known RBP	4.29	□□□□□ -1.72
SLS1	YLR139C	VPS25	P47142	202 aa		4.29	□□□□□ -1.72
SLS1	YLR139C	COG1	P53079	417 aa		4.29	□□□□□ -1.72
SLS1	YLR139C	CRN1	Q06440	651 aa		4.29	□□□□□ -1.72
SLS1	YLR139C	POS5	Q06892	414 aa		4.29	□□□□□ -1.72
SLS1	YLR139C	YLR049C	Q12110	428 aa		4.29	□□□□□ -1.72
SLS1	YLR139C	CHO1	P08456	276 aa		4.28	□□□□□ -1.72
SLS1	YLR139C	STE50	P25344	346 aa		4.28	□□□□□ -1.72
SLS1	YLR139C	XRS2	P33301	854 aa		4.28	□□□□□ -1.72
SLS1	YLR139C	PCL6	P40038	420 aa		4.28	□□□□□ -1.72
SLS1	YLR139C	MEP2	P41948	499 aa		4.28	□□□□□ -1.72
SLS1	YLR139C	STB2	P46679	850 aa		4.28	□□□□□ -1.72
SLS1	YLR139C	YJR008W	P47085	338 aa		4.28	□□□□□ -1.72
SLS1	YLR139C	CSR1	Q06705	408 aa	Known RBP	4.28	□□□□□ -1.72
SLS1	YLR139C	YLR112W	Q12130	139 aa		4.28	□□□□□ -1.72
SLS1	YLR139C	PET111	P08468	800 aa		4.27	□□□□□ -1.73
SLS1	YLR139C	NTR2	P36118	322 aa	Predicted RBP	4.27	□□□□□ -1.73
SLS1	YLR139C	LEU5	P38702	357 aa		4.27	□□□□□ -1.73
SLS1	YLR139C	SEC31	P38968	1273 aa	Known RBP	4.27	□□□□□ -1.73
SLS1	YLR139C	MRX1	P40050	688 aa		4.27	□□□□□ -1.73
SLS1	YLR139C	SWP82	P43554	623 aa		4.27	□□□□□ -1.73
SLS1	YLR139C	ASI1	P54074	624 aa		4.27	□□□□□ -1.73
SLS1	YLR139C	TMA16	Q08687	178 aa		4.27	□□□□□ -1.73
SLS1	YLR139C	TPK1	P06244	397 aa		4.27	□□□□□ -1.73
SLS1	YLR139C	RPL42A	P0CX27	106 aa	Known RBP	4.27	□□□□□ -1.73
SLS1	YLR139C	RPL42B	P0CX28	106 aa	Known RBP	4.27	□□□□□ -1.73
SLS1	YLR139C	YCR043C	P25361	127 aa		4.27	□□□□□ -1.73
SLS1	YLR139C	SRB5	P32585	307 aa		4.27	□□□□□ -1.73
SLS1	YLR139C	LHS1	P36016	881 aa		4.27	□□□□□ -1.73
SLS1	YLR139C	ARC40	P38328	384 aa	Known RBP	4.27	□□□□□ -1.73
SLS1	YLR139C	TES1	P41903	349 aa	Known RBP	4.27	□□□□□ -1.73
SLS1	YLR139C	CTF18	P49956	741 aa		4.27	□□□□□ -1.73
SLS1	YLR139C	YMR034C	Q05131	434 aa	Predicted RBP	4.27	□□□□□ -1.73
SLS1	YLR139C	PTH2	P34222	208 aa		4.26	□□□□□ -1.73
SLS1	YLR139C	IES5	P40060	125 aa		4.26	□□□□□ -1.73
SLS1	YLR139C	SMK1	P41808	388 aa		4.26	□□□□□ -1.73
SLS1	YLR139C	CTK2	P46962	323 aa		4.26	□□□□□ -1.73
SLS1	YLR139C	PSP1	P50896	841 aa	Known RBP	4.26	□□□□□ -1.73
SLS1	YLR139C	ARP9	Q05123	467 aa		4.26	□□□□□ -1.73
SLS1	YLR139C	ECI1	Q05871	280 aa		4.25	□□□□□ -1.73
SLS1	YLR139C	SOF1	P33750	489 aa	Known RBP	4.25	□□□□□ -1.73
SLS1	YLR139C	TFC3	P34111	1160 aa		4.25	□□□□□ -1.73
SLS1	YLR139C	MNN2	P38069	597 aa		4.25	□□□□□ -1.73
SLS1	YLR139C	IST3	P40565	148 aa	Predicted RBP	4.25	□□□□□ -1.73
SLS1	YLR139C	RRT6	P53117	311 aa	Predicted RBP	4.25	□□□□□ -1.73
SLS1	YLR139C	RSM28	Q03430	361 aa		4.25	□□□□□ -1.73
SLS1	YLR139C	TKL1	P23254	680 aa	Known RBP	4.24	□□□□□ -1.73
SLS1	YLR139C	SAP185	P40856	1058 aa		4.24	□□□□□ -1.73
SLS1	YLR139C	PFA5	Q03289	374 aa		4.24	□□□□□ -1.73
SLS1	YLR139C	IZH1	Q03419	316 aa		4.24	□□□□□ -1.73
SLS1	YLR139C	VCX1	Q99385	411 aa		4.24	□□□□□ -1.73
SLS1	YLR139C	MET30	P39014	640 aa		4.23	□□□□□ -1.73
SLS1	YLR139C	ECM10	P39987	644 aa		4.23	□□□□□ -1.73
SLS1	YLR139C	BNA1	P47096	177 aa		4.23	□□□□□ -1.73
SLS1	YLR139C	YNR061C	P53747	219 aa		4.23	□□□□□ -1.73
SLS1	YLR139C	ERG27	Q12452	347 aa	Known RBP	4.23	□□□□□ -1.73
SLS1	YLR139C	RAD16	P31244	790 aa		4.23	□□□□□ -1.73
SLS1	YLR139C	IOC4	Q04213	475 aa		4.23	□□□□□ -1.73
SLS1	YLR139C	ECM16	Q04217	1267 aa	Known RBP	4.23	□□□□□ -1.73
SLS1	YLR139C	PSR2	Q07949	397 aa		4.23	□□□□□ -1.73
SLS1	YLR139C	SAC1	P32368	623 aa	Known RBP	4.22	□□□□□ -1.73
SLS1	YLR139C	ESBP6	P53918	673 aa		4.22	□□□□□ -1.73
SLS1	YLR139C	ERG8	P24521	451 aa		4.21	□□□□□ -1.74
SLS1	YLR139C	CLB2	P24869	491 aa		4.21	□□□□□ -1.74
SLS1	YLR139C	PFK26	P40433	827 aa	Known RBP	4.21	□□□□□ -1.74
SLS1	YLR139C	YIL169C	P40442	995 aa		4.21	□□□□□ -1.74
SLS1	YLR139C	VPS4	P52917	437 aa		4.21	□□□□□ -1.74
SLS1	YLR139C	BET4	Q00618	327 aa		4.21	□□□□□ -1.74
SLS1	YLR139C	YLR281C	Q05863	155 aa		4.21	□□□□□ -1.74
SLS1	YLR139C	TRM8	Q12009	286 aa		4.21	□□□□□ -1.74
SLS1	YLR139C	SNF1	P06782	633 aa	Known RBP	4.21	□□□□□ -1.74
SLS1	YLR139C	CBP1	P07252	654 aa		4.21	□□□□□ -1.74
SLS1	YLR139C	GCS1	P35197	352 aa		4.21	□□□□□ -1.74
SLS1	YLR139C	PSY4	P38193	441 aa		4.21	□□□□□ -1.74
SLS1	YLR139C	MAK10	Q02197	733 aa		4.21	□□□□□ -1.74
SLS1	YLR139C	ARP10	Q04549	284 aa		4.21	□□□□□ -1.74
SLS1	YLR139C	YMR254C	Q04838	102 aa		4.21	□□□□□ -1.74
SLS1	YLR139C	UTP21	Q06078	939 aa	Predicted RBP	4.21	□□□□□ -1.74
SLS1	YLR139C	GPN2	Q08726	347 aa	Predicted RBP	4.21	□□□□□ -1.74
SLS1	YLR139C	NDD1	Q08887	554 aa		4.21	□□□□□ -1.74
SLS1	YLR139C	RAP1	P11938	827 aa		4.2	□□□□□ -1.74
SLS1	YLR139C	TEF4	P36008	412 aa	Known RBP	4.2	□□□□□ -1.74
SLS1	YLR139C	PSD1	P39006	500 aa		4.2	□□□□□ -1.74
SLS1	YLR139C	HXT9	P40885	567 aa		4.2	□□□□□ -1.74
SLS1	YLR139C	REG1	Q00816	1014 aa		4.2	□□□□□ -1.74
SLS1	YLR139C	DIG1	Q03063	452 aa	Known RBP	4.2	□□□□□ -1.74
SLS1	YLR139C	FCP1	Q03254	732 aa		4.2	□□□□□ -1.74
SLS1	YLR139C	ATG16	Q03818	150 aa		4.2	□□□□□ -1.74
SLS1	YLR139C	PSK2	Q08217	1101 aa		4.2	□□□□□ -1.74
SLS1	YLR139C	APL5	Q08951	932 aa	Known RBP	4.2	□□□□□ -1.74
SLS1	YLR139C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
SLS1	YLR139C	RKM3	P38222	552 aa		4.19	□□□□□ -1.74
SLS1	YLR139C	YFR020W	P43600	232 aa		4.19	□□□□□ -1.74
SLS1	YLR139C	IML2	P47031	731 aa		4.19	□□□□□ -1.74
SLS1	YLR139C	YTP1	P53584	459 aa		4.19	□□□□□ -1.74
SLS1	YLR139C	IST1	P53843	298 aa	Predicted RBP	4.19	□□□□□ -1.74
SLS1	YLR139C	YNL181W	P53878	407 aa		4.19	□□□□□ -1.74
SLS1	YLR139C	VID22	Q05934	901 aa		4.19	□□□□□ -1.74
SLS1	YLR139C	MCP2	Q06567	569 aa		4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 35.3 ms