RNA–Protein interactions for RNA: YLR062C

BUD28, Transcript of Dubious open reading frame, yeastyeast

Gene BUD28, Length 378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD28YLR062C PCL10P53124 433 aa5.09□□□□□ -1.59
BUD28YLR062C YPR003CP53394 754 aa5.09□□□□□ -1.59
BUD28YLR062C SUN4P53616 420 aa5.09□□□□□ -1.59
BUD28YLR062C YNL143CP53908 130 aa5.09□□□□□ -1.59
BUD28YLR062C SWS2P53937 143 aa5.09□□□□□ -1.59
BUD28YLR062C RSC4Q02206 625 aa5.09□□□□□ -1.59
BUD28YLR062C NUP100Q02629 959 aa5.09□□□□□ -1.59
BUD28YLR062C RLI1Q03195 608 aaKnown RBP5.09□□□□□ -1.59
BUD28YLR062C TRM82Q03774 444 aa5.09□□□□□ -1.59
BUD28YLR062C POB3Q04636 552 aaKnown RBP5.09□□□□□ -1.59
BUD28YLR062C SML1Q04964 104 aa5.09□□□□□ -1.59
BUD28YLR062C HDA3Q06623 655 aa5.09□□□□□ -1.59
BUD28YLR062C RTT10Q08924 1013 aa5.09□□□□□ -1.59
BUD28YLR062C AIM41Q12032 185 aa5.09□□□□□ -1.59
BUD28YLR062C SRO7Q12038 1033 aa5.09□□□□□ -1.59
BUD28YLR062C RTK1Q12100 620 aaPredicted RBP5.09□□□□□ -1.59
BUD28YLR062C YLR149CQ99296 730 aa5.09□□□□□ -1.59
BUD28YLR062C FRT1Q99332 602 aa5.09□□□□□ -1.59
BUD28YLR062C HFA1P32874 2273 aa5.09□□□□□ -1.59
BUD28YLR062C INH1P01097 85 aa5.08□□□□□ -1.6
BUD28YLR062C YKR104WP0CE69 306 aa5.08□□□□□ -1.6
BUD28YLR062C HAP4P14064 554 aa5.08□□□□□ -1.6
BUD28YLR062C POL30P15873 258 aaKnown RBP5.08□□□□□ -1.6
BUD28YLR062C SNF5P18480 905 aa5.08□□□□□ -1.6
BUD28YLR062C UBA1P22515 1024 aaKnown RBP5.08□□□□□ -1.6
BUD28YLR062C YSP3P25036 478 aa5.08□□□□□ -1.6
BUD28YLR062C ERG6P25087 383 aaKnown RBP5.08□□□□□ -1.6
BUD28YLR062C PHO87P25360 923 aa5.08□□□□□ -1.6
BUD28YLR062C EMC1P25574 760 aa5.08□□□□□ -1.6
BUD28YLR062C PAP1P29468 568 aaKnown RBP5.08□□□□□ -1.6
BUD28YLR062C PHO11P35842 467 aa5.08□□□□□ -1.6
BUD28YLR062C SRP72P38688 640 aaKnown RBP5.08□□□□□ -1.6
BUD28YLR062C PHO12P38693 467 aa5.08□□□□□ -1.6
BUD28YLR062C RRP3P38712 501 aaKnown RBP5.08□□□□□ -1.6
BUD28YLR062C DSN1P40568 576 aa5.08□□□□□ -1.6
BUD28YLR062C RPC17P47076 161 aa5.08□□□□□ -1.6
BUD28YLR062C JSN1P47135 1091 aaKnown RBP RIP-Chip data5.08□□□□□ -1.6not detected
BUD28YLR062C SAP4P53036 818 aa5.08□□□□□ -1.6
BUD28YLR062C CWC22P53333 577 aaKnown RBP5.08□□□□□ -1.6
BUD28YLR062C YAT1P80235 687 aa5.08□□□□□ -1.6
BUD28YLR062C YMR160WQ03823 816 aa5.08□□□□□ -1.6
BUD28YLR062C YDR132CQ03900 495 aa5.08□□□□□ -1.6
BUD28YLR062C ECI1Q05871 280 aa5.08□□□□□ -1.6
BUD28YLR062C MCP2Q06567 569 aa5.08□□□□□ -1.6
BUD28YLR062C HBT1Q07653 1046 aaKnown RBP5.08□□□□□ -1.6
BUD28YLR062C RPN8Q08723 338 aaKnown RBP5.08□□□□□ -1.6
BUD28YLR062C STB3Q12427 513 aa5.08□□□□□ -1.6
BUD28YLR062C ZRT2Q12436 422 aa5.08□□□□□ -1.6
BUD28YLR062C ERR1P0CX10 437 aa5.07□□□□□ -1.6
BUD28YLR062C ERR2P0CX11 437 aa5.07□□□□□ -1.6
BUD28YLR062C CUP1-1P0CX80 61 aa5.07□□□□□ -1.6
BUD28YLR062C CUP1-2P0CX81 61 aa5.07□□□□□ -1.6
BUD28YLR062C CDC24P11433 854 aaPredicted RBP5.07□□□□□ -1.6
BUD28YLR062C PET123P17558 318 aa5.07□□□□□ -1.6
BUD28YLR062C PUP1P25043 261 aa5.07□□□□□ -1.6
BUD28YLR062C SNT1P25357 1226 aa5.07□□□□□ -1.6
BUD28YLR062C HEM12P32347 362 aaPredicted RBP5.07□□□□□ -1.6
BUD28YLR062C GCD6P32501 712 aaKnown RBP5.07□□□□□ -1.6
BUD28YLR062C OCA5P38738 679 aa5.07□□□□□ -1.6
BUD28YLR062C SMF1P38925 575 aa5.07□□□□□ -1.6
BUD28YLR062C TIM17P39515 158 aa5.07□□□□□ -1.6
BUD28YLR062C ERV46P39727 415 aa5.07□□□□□ -1.6
BUD28YLR062C LTP1P40347 161 aa5.07□□□□□ -1.6
BUD28YLR062C YIL108WP40483 696 aaKnown RBP5.07□□□□□ -1.6
BUD28YLR062C ERR3P42222 437 aa5.07□□□□□ -1.6
BUD28YLR062C YJR115WP47152 169 aa5.07□□□□□ -1.6
BUD28YLR062C SWC4P53201 476 aa5.07□□□□□ -1.6
BUD28YLR062C SLU7Q02775 382 aaKnown RBP5.07□□□□□ -1.6
BUD28YLR062C TSC13Q99190 310 aa5.07□□□□□ -1.6
BUD28YLR062C QCR6P00127 147 aa5.06□□□□□ -1.6
BUD28YLR062C TUB1P09733 447 aaKnown RBP5.06□□□□□ -1.6
BUD28YLR062C IMA3P0CW40 589 aa5.06□□□□□ -1.6
BUD28YLR062C IMA4P0CW41 589 aa5.06□□□□□ -1.6
BUD28YLR062C RPL1AP0CX43 217 aaKnown RBP5.06□□□□□ -1.6
BUD28YLR062C RPL1BP0CX44 217 aaKnown RBP5.06□□□□□ -1.6
BUD28YLR062C SBP1P10080 294 aaKnown RBP5.06□□□□□ -1.6
BUD28YLR062C STE6P12866 1290 aa5.06□□□□□ -1.6
BUD28YLR062C GLN4P13188 809 aaKnown RBP5.06□□□□□ -1.6
BUD28YLR062C GID7P25569 745 aa5.06□□□□□ -1.6
BUD28YLR062C RFA2P26754 273 aaKnown RBP5.06□□□□□ -1.6
BUD28YLR062C NDI1P32340 513 aa5.06□□□□□ -1.6
BUD28YLR062C SPS19P32573 292 aaKnown RBP5.06□□□□□ -1.6
BUD28YLR062C IMP3P32899 183 aaPredicted RBP5.06□□□□□ -1.6
BUD28YLR062C CTF13P35203 478 aa5.06□□□□□ -1.6
BUD28YLR062C KES1P35844 434 aaKnown RBP5.06□□□□□ -1.6
BUD28YLR062C PBP2P38151 413 aaKnown RBP RIP-Chip data5.06□□□□□ -1.6not detected
BUD28YLR062C IML3P38265 245 aa5.06□□□□□ -1.6
BUD28YLR062C YBR259WP38338 688 aa5.06□□□□□ -1.6
BUD28YLR062C GND1P38720 489 aaKnown RBP5.06□□□□□ -1.6
BUD28YLR062C SMF2P38778 549 aa5.06□□□□□ -1.6
BUD28YLR062C CCT6P39079 546 aa5.06□□□□□ -1.6
BUD28YLR062C SLX8P40072 274 aa5.06□□□□□ -1.6
BUD28YLR062C SCC4P40090 624 aa5.06□□□□□ -1.6
BUD28YLR062C RGI2P40188 164 aa5.06□□□□□ -1.6
BUD28YLR062C TAH11P47112 604 aa5.06□□□□□ -1.6
BUD28YLR062C FRE4P53746 719 aa5.06□□□□□ -1.6
BUD28YLR062C TGL2P54857 326 aa5.06□□□□□ -1.6
BUD28YLR062C YML096WQ04489 525 aa5.06□□□□□ -1.6
BUD28YLR062C GSF2Q04697 403 aaKnown RBP5.06□□□□□ -1.6
BUD28YLR062C CIA1Q05583 330 aa5.06□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms