RNA–Protein interactions for RNA: YKR094C

RPL40B, Transcript of Ubiquitin-ribosomal 60S subunit protein L40B fusion protein, yeastyeast

Gene RPL40B, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40BYKR094C MDM31P38880 579 aa2.41□□□□□ -2.02
RPL40BYKR094C SWD1P39706 426 aa2.41□□□□□ -2.02
RPL40BYKR094C HXT9P40885 567 aa2.41□□□□□ -2.02
RPL40BYKR094C PUS4P48567 403 aaKnown RBP2.41□□□□□ -2.02
RPL40BYKR094C TAM41P53230 385 aa2.41□□□□□ -2.02
RPL40BYKR094C CTL1Q03220 320 aaKnown RBP2.41□□□□□ -2.02
RPL40BYKR094C PFA5Q03289 374 aa2.41□□□□□ -2.02
RPL40BYKR094C ARP10Q04549 284 aa2.41□□□□□ -2.02
RPL40BYKR094C CHO1P08456 276 aa2.4□□□□□ -2.03
RPL40BYKR094C MRS3P10566 314 aa2.4□□□□□ -2.03
RPL40BYKR094C KAR1P11927 433 aa2.4□□□□□ -2.03
RPL40BYKR094C ADE17P38009 592 aaKnown RBP2.4□□□□□ -2.03
RPL40BYKR094C NMD2P38798 1089 aaKnown RBP2.4□□□□□ -2.03
RPL40BYKR094C YPI1P43587 155 aa2.4□□□□□ -2.03
RPL40BYKR094C PSR2Q07949 397 aa2.4□□□□□ -2.03
RPL40BYKR094C LSB5P25369 354 aa2.39□□□□□ -2.03
RPL40BYKR094C RFA2P26754 273 aaKnown RBP2.39□□□□□ -2.03
RPL40BYKR094C LOS1P33418 1100 aaPredicted RBP2.39□□□□□ -2.03
RPL40BYKR094C UBP13P38187 747 aa2.39□□□□□ -2.03
RPL40BYKR094C SEC31P38968 1273 aaKnown RBP2.39□□□□□ -2.03
RPL40BYKR094C YPL108WQ02872 168 aaPredicted RBP2.39□□□□□ -2.03
RPL40BYKR094C YMR178WQ03219 274 aaKnown RBP2.39□□□□□ -2.03
RPL40BYKR094C BAG7Q12128 409 aa2.39□□□□□ -2.03
RPL40BYKR094C YSP3P25036 478 aa2.38□□□□□ -2.03
RPL40BYKR094C SDS22P36047 338 aa2.38□□□□□ -2.03
RPL40BYKR094C SAW1P39735 261 aa2.38□□□□□ -2.03
RPL40BYKR094C MAK10Q02197 733 aa2.38□□□□□ -2.03
RPL40BYKR094C AGA1P32323 725 aa2.37□□□□□ -2.03
RPL40BYKR094C FRD1P32614 470 aaKnown RBP2.37□□□□□ -2.03
RPL40BYKR094C STV1P37296 890 aa2.37□□□□□ -2.03
RPL40BYKR094C YBR071WP38243 211 aa2.37□□□□□ -2.03
RPL40BYKR094C RFC1P38630 861 aaKnown RBP2.37□□□□□ -2.03
RPL40BYKR094C BUD16P39988 312 aa2.37□□□□□ -2.03
RPL40BYKR094C YJL068CP40363 299 aa2.37□□□□□ -2.03
RPL40BYKR094C DJP1P40564 432 aa2.37□□□□□ -2.03
RPL40BYKR094C DIM1P41819 318 aaKnown RBP2.37□□□□□ -2.03
RPL40BYKR094C PHM6Q05637 104 aa2.37□□□□□ -2.03
RPL40BYKR094C GDH1P07262 454 aaKnown RBP2.36□□□□□ -2.03
RPL40BYKR094C TKL1P23254 680 aaKnown RBP2.36□□□□□ -2.03
RPL40BYKR094C GID7P25569 745 aa2.36□□□□□ -2.03
RPL40BYKR094C RPT2P40327 437 aaKnown RBP2.36□□□□□ -2.03
RPL40BYKR094C YDL186WP48568 277 aa2.36□□□□□ -2.03
RPL40BYKR094C TMA64Q04600 565 aaKnown RBP2.36□□□□□ -2.03
RPL40BYKR094C TFC4P33339 1025 aa2.35□□□□□ -2.03
RPL40BYKR094C GUF1P46943 645 aa2.35□□□□□ -2.03
RPL40BYKR094C YTP1P53584 459 aa2.35□□□□□ -2.03
RPL40BYKR094C APJ1P53940 528 aa2.35□□□□□ -2.03
RPL40BYKR094C STP3Q05937 343 aa2.35□□□□□ -2.03
RPL40BYKR094C YDL218WQ07629 317 aa2.35□□□□□ -2.03
RPL40BYKR094C PET111P08468 800 aa2.34□□□□□ -2.03
RPL40BYKR094C RPB8P20436 146 aa2.34□□□□□ -2.03
RPL40BYKR094C ERG1P32476 496 aaKnown RBP2.34□□□□□ -2.03
RPL40BYKR094C ENP1P38333 483 aaKnown RBP2.34□□□□□ -2.03
RPL40BYKR094C ERG7P38604 731 aa2.34□□□□□ -2.03
RPL40BYKR094C CAB2P40506 365 aa2.34□□□□□ -2.03
RPL40BYKR094C YJR120WP47157 116 aa2.34□□□□□ -2.03
RPL40BYKR094C RBG2P53295 368 aaKnown RBP2.34□□□□□ -2.03
RPL40BYKR094C SUL2Q12325 893 aa2.34□□□□□ -2.03
RPL40BYKR094C YML003WP0CF16 290 aa2.33□□□□□ -2.04
RPL40BYKR094C ATS1P31386 333 aa2.33□□□□□ -2.04
RPL40BYKR094C MIC60P36112 540 aa2.33□□□□□ -2.04
RPL40BYKR094C MTC6P38849 526 aa2.33□□□□□ -2.04
RPL40BYKR094C YJL213WP40896 331 aa2.33□□□□□ -2.04
RPL40BYKR094C COG6P53959 839 aa2.33□□□□□ -2.04
RPL40BYKR094C MTG1Q03151 367 aaPredicted RBP2.33□□□□□ -2.04
RPL40BYKR094C SWA2Q06677 668 aa2.33□□□□□ -2.04
RPL40BYKR094C RPL15AP05748 204 aaKnown RBP2.32□□□□□ -2.04
RPL40BYKR094C RAP1P11938 827 aa2.32□□□□□ -2.04
RPL40BYKR094C CLB2P24869 491 aa2.32□□□□□ -2.04
RPL40BYKR094C RPS2P25443 254 aaKnown RBP2.32□□□□□ -2.04
RPL40BYKR094C SAC1P32368 623 aaKnown RBP2.32□□□□□ -2.04
RPL40BYKR094C CNM67P53865 581 aaKnown RBP2.32□□□□□ -2.04
RPL40BYKR094C NUP100Q02629 959 aa2.32□□□□□ -2.04
RPL40BYKR094C TMA17Q12513 150 aa2.32□□□□□ -2.04
RPL40BYKR094C PET122P10355 254 aa2.31□□□□□ -2.04
RPL40BYKR094C MCM3P24279 971 aaKnown RBP2.31□□□□□ -2.04
RPL40BYKR094C LRE1P25579 583 aaKnown RBP2.31□□□□□ -2.04
RPL40BYKR094C FPR3P38911 411 aaKnown RBP2.31□□□□□ -2.04
RPL40BYKR094C STT3P39007 718 aaKnown RBP2.31□□□□□ -2.04
RPL40BYKR094C YER130CP39959 443 aa2.31□□□□□ -2.04
RPL40BYKR094C PRE5P40302 234 aaKnown RBP2.31□□□□□ -2.04
RPL40BYKR094C YJL132WP47014 750 aa2.31□□□□□ -2.04
RPL40BYKR094C YGL242CP53066 181 aa2.31□□□□□ -2.04
RPL40BYKR094C ATG21Q02887 496 aa2.31□□□□□ -2.04
RPL40BYKR094C HCR1Q05775 265 aaKnown RBP2.31□□□□□ -2.04
RPL40BYKR094C SRP54P20424 541 aaKnown RBP2.3□□□□□ -2.04
RPL40BYKR094C RIT1P23796 513 aa2.3□□□□□ -2.04
RPL40BYKR094C UBP12P39538 1254 aa2.3□□□□□ -2.04
RPL40BYKR094C MAD3P47074 515 aa2.3□□□□□ -2.04
RPL40BYKR094C DCP2P53550 970 aaKnown RBP2.3□□□□□ -2.04
RPL40BYKR094C ATG23Q06671 453 aa2.3□□□□□ -2.04
RPL40BYKR094C ADE3P07245 946 aaKnown RBP2.29□□□□□ -2.04
RPL40BYKR094C SIR1P21691 654 aa2.29□□□□□ -2.04
RPL40BYKR094C MCK1P21965 375 aaKnown RBP2.29□□□□□ -2.04
RPL40BYKR094C LHS1P36016 881 aa2.29□□□□□ -2.04
RPL40BYKR094C AGP2P38090 596 aa2.29□□□□□ -2.04
RPL40BYKR094C PTH1P38876 190 aaKnown RBP2.29□□□□□ -2.04
RPL40BYKR094C RPH1P39956 796 aa2.29□□□□□ -2.04
RPL40BYKR094C RGI2P40188 164 aa2.29□□□□□ -2.04
RPL40BYKR094C YIL060WP40519 144 aa2.29□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 25.8 ms