RNA–Protein interactions for RNA: YKL096W

CWP1, Transcript of Cell wall mannoprotein that localizes to birth scars of daughter cells, yeast

Gene CWP1, Length 720 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CWP1	YKL096W	RIM2	P38127	377 aa		11.43	□□□□□ -0.58
CWP1	YKL096W	YHR182W	P38870	785 aa		11.43	□□□□□ -0.58
CWP1	YKL096W	YJR061W	P40355	935 aa		11.43	□□□□□ -0.58
CWP1	YKL096W	HOS4	P40480	1083 aa		11.43	□□□□□ -0.58
CWP1	YKL096W	CSN12	P47130	423 aa		11.43	□□□□□ -0.58
CWP1	YKL096W	MNT2	P53059	558 aa		11.43	□□□□□ -0.58
CWP1	YKL096W	UBX4	P54730	416 aa		11.43	□□□□□ -0.58
CWP1	YKL096W	LCB5	Q06147	687 aa	Known RBP	11.43	□□□□□ -0.58
CWP1	YKL096W	YOR338W	Q99326	363 aa		11.43	□□□□□ -0.58
CWP1	YKL096W	STE2	D6VTK4	431 aa		11.42	□□□□□ -0.58
CWP1	YKL096W	LEU1	P07264	779 aa	Known RBP	11.42	□□□□□ -0.58
CWP1	YKL096W	YMR085W	P0CF18	432 aa		11.42	□□□□□ -0.58
CWP1	YKL096W	NSP1	P14907	823 aa	Known RBP	11.42	□□□□□ -0.58
CWP1	YKL096W	PYC2	P32327	1180 aa	Known RBP	11.42	□□□□□ -0.58
CWP1	YKL096W	PHA2	P32452	334 aa		11.42	□□□□□ -0.58
CWP1	YKL096W	GCD11	P32481	527 aa	Known RBP	11.42	□□□□□ -0.58
CWP1	YKL096W	LDB7	P38210	180 aa		11.42	□□□□□ -0.58
CWP1	YKL096W	HAT2	P39984	401 aa		11.42	□□□□□ -0.58
CWP1	YKL096W	YJR124C	P47159	448 aa		11.42	□□□□□ -0.58
CWP1	YKL096W	TAF6	P53040	516 aa		11.42	□□□□□ -0.58
CWP1	YKL096W	SPP2	Q02521	185 aa		11.42	□□□□□ -0.58
CWP1	YKL096W	HO	P09932	586 aa		11.41	□□□□□ -0.58
CWP1	YKL096W	SEC63	P14906	663 aa		11.41	□□□□□ -0.58
CWP1	YKL096W	MRM1	P25270	412 aa		11.41	□□□□□ -0.58
CWP1	YKL096W	PUP3	P25451	205 aa	Known RBP	11.41	□□□□□ -0.58
CWP1	YKL096W	NIP1	P32497	812 aa	Known RBP	11.41	□□□□□ -0.58
CWP1	YKL096W	STE13	P33894	931 aa		11.41	□□□□□ -0.58
CWP1	YKL096W	PXA2	P34230	853 aa		11.41	□□□□□ -0.58
CWP1	YKL096W	IRS4	P36115	615 aa	Known RBP	11.41	□□□□□ -0.58
CWP1	YKL096W	YSW1	P38280	609 aa		11.41	□□□□□ -0.58
CWP1	YKL096W	GDT1	P38301	280 aa	Predicted RBP	11.41	□□□□□ -0.58
CWP1	YKL096W	PHO89	P38361	574 aa		11.41	□□□□□ -0.58
CWP1	YKL096W	SRP72	P38688	640 aa	Known RBP	11.41	□□□□□ -0.58
CWP1	YKL096W	ACO2	P39533	789 aa		11.41	□□□□□ -0.58
CWP1	YKL096W	OSW5	P40219	148 aa		11.41	□□□□□ -0.58
CWP1	YKL096W	GLG2	P47011	380 aa		11.41	□□□□□ -0.58
CWP1	YKL096W	ATH1	P48016	1211 aa		11.41	□□□□□ -0.58
CWP1	YKL096W	YNL143C	P53908	130 aa		11.41	□□□□□ -0.58
CWP1	YKL096W	SHE9	Q04172	456 aa		11.41	□□□□□ -0.58
CWP1	YKL096W	NUT2	Q06213	157 aa		11.41	□□□□□ -0.58
CWP1	YKL096W	UBR1	P19812	1950 aa		11.4	□□□□□ -0.58
CWP1	YKL096W	MSF1	P08425	469 aa		11.4	□□□□□ -0.58
CWP1	YKL096W	YCR099C	P25657	155 aa		11.4	□□□□□ -0.58
CWP1	YKL096W	MRX1	P40050	688 aa		11.4	□□□□□ -0.58
CWP1	YKL096W	ALG8	P40351	577 aa		11.4	□□□□□ -0.58
CWP1	YKL096W	YIR007W	P40566	764 aa		11.4	□□□□□ -0.58
CWP1	YKL096W	GTS1	P40956	396 aa		11.4	□□□□□ -0.58
CWP1	YKL096W	FAR3	P46671	204 aa		11.4	□□□□□ -0.58
CWP1	YKL096W	EMC4	P53073	190 aa		11.4	□□□□□ -0.58
CWP1	YKL096W	YGL140C	P53120	1219 aa		11.4	□□□□□ -0.58
CWP1	YKL096W	IST1	P53843	298 aa	Predicted RBP	11.4	□□□□□ -0.58
CWP1	YKL096W	YDR131C	Q03899	556 aa		11.4	□□□□□ -0.58
CWP1	YKL096W	NSE1	Q07913	336 aa		11.4	□□□□□ -0.58
CWP1	YKL096W	NUS1	Q12063	375 aa		11.4	□□□□□ -0.58
CWP1	YKL096W	NOT5	Q12514	560 aa	Predicted RBP	11.4	□□□□□ -0.58
CWP1	YKL096W	RPS9A	O13516	197 aa	Known RBP	11.39	□□□□□ -0.59
CWP1	YKL096W	TRX2	P22803	104 aa	Known RBP	11.39	□□□□□ -0.59
CWP1	YKL096W	PHO3	P24031	467 aa		11.39	□□□□□ -0.59
CWP1	YKL096W	YSC84	P32793	468 aa		11.39	□□□□□ -0.59
CWP1	YKL096W	HSM3	P38348	480 aa		11.39	□□□□□ -0.59
CWP1	YKL096W	RPH1	P39956	796 aa		11.39	□□□□□ -0.59
CWP1	YKL096W	REF2	P42073	533 aa	Predicted RBP	11.39	□□□□□ -0.59
CWP1	YKL096W	SET2	P46995	733 aa	Known RBP	11.39	□□□□□ -0.59
CWP1	YKL096W	PET130	P47065	347 aa		11.39	□□□□□ -0.59
CWP1	YKL096W	SPC105	P53148	917 aa		11.39	□□□□□ -0.59
CWP1	YKL096W	NOB1	Q08444	459 aa	Known RBP	11.39	□□□□□ -0.59
CWP1	YKL096W	HRK1	Q08732	759 aa	Known RBP	11.39	□□□□□ -0.59
CWP1	YKL096W	CHS5	Q12114	671 aa	Known RBP	11.39	□□□□□ -0.59
CWP1	YKL096W	BAS1	P22035	811 aa		11.38	□□□□□ -0.59
CWP1	YKL096W	YDR089W	P38966	869 aa		11.38	□□□□□ -0.59
CWP1	YKL096W	ARC1	P46672	376 aa	Known RBP	11.38	□□□□□ -0.59
CWP1	YKL096W	MAD3	P47074	515 aa		11.38	□□□□□ -0.59
CWP1	YKL096W	RSM7	P47150	247 aa		11.38	□□□□□ -0.59
CWP1	YKL096W	SUB1	P54000	292 aa	Known RBP	11.38	□□□□□ -0.59
CWP1	YKL096W	VPS16	Q03308	798 aa		11.38	□□□□□ -0.59
CWP1	YKL096W	CSN9	Q03981	162 aa		11.38	□□□□□ -0.59
CWP1	YKL096W	ABF1	P14164	731 aa		11.37	□□□□□ -0.59
CWP1	YKL096W	BRF1	P29056	596 aa		11.37	□□□□□ -0.59
CWP1	YKL096W	MRPL9	P31334	269 aa		11.37	□□□□□ -0.59
CWP1	YKL096W	MF(ALPHA)2	P32435	120 aa		11.37	□□□□□ -0.59
CWP1	YKL096W	LRG1	P35688	1017 aa		11.37	□□□□□ -0.59
CWP1	YKL096W	IME4	P41833	600 aa		11.37	□□□□□ -0.59
CWP1	YKL096W	BOL2	P53082	120 aa		11.37	□□□□□ -0.59
CWP1	YKL096W	VAC7	P53950	1165 aa		11.37	□□□□□ -0.59
CWP1	YKL096W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	11.37	□□□□□ -0.59	not detected
CWP1	YKL096W	YMR155W	Q03795	547 aa		11.37	□□□□□ -0.59
CWP1	YKL096W	PPN1	Q04119	674 aa		11.37	□□□□□ -0.59
CWP1	YKL096W	APC9	Q12107	265 aa		11.37	□□□□□ -0.59
CWP1	YKL096W	MRH1	Q12117	320 aa	Predicted RBP	11.37	□□□□□ -0.59
CWP1	YKL096W	YMR084W	A2P2R3	262 aa		11.36	□□□□□ -0.59
CWP1	YKL096W	UBA1	P22515	1024 aa	Known RBP	11.36	□□□□□ -0.59
CWP1	YKL096W	STB6	P36085	766 aa		11.36	□□□□□ -0.59
CWP1	YKL096W	VRP1	P37370	817 aa		11.36	□□□□□ -0.59
CWP1	YKL096W	MUP3	P38734	546 aa		11.36	□□□□□ -0.59
CWP1	YKL096W	LSB3	P43603	459 aa	Known RBP	11.36	□□□□□ -0.59
CWP1	YKL096W	TDA7	P53882	636 aa	Predicted RBP	11.36	□□□□□ -0.59
CWP1	YKL096W	YMR178W	Q03219	274 aa	Known RBP	11.36	□□□□□ -0.59
CWP1	YKL096W	TVP15	Q03860	143 aa		11.36	□□□□□ -0.59
CWP1	YKL096W	HPT1	Q04178	221 aa	Known RBP	11.36	□□□□□ -0.59
CWP1	YKL096W	TMA46	Q12000	345 aa	Known RBP	11.36	□□□□□ -0.59

Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms