RNA–Protein interactions for RNA: YHR170W

NMD3, Transcript of Protein involved in nuclear export of the large ribosomal subunit, yeast

Gene NMD3, Length 1,557 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NMD3	YHR170W	AVT2	P39981	480 aa		4.7	□□□□□ -1.66
NMD3	YHR170W	MGS1	P40151	587 aa		4.7	□□□□□ -1.66
NMD3	YHR170W	HIS6	P40545	261 aa		4.7	□□□□□ -1.66
NMD3	YHR170W	SNZ3	P43545	298 aa		4.7	□□□□□ -1.66
NMD3	YHR170W	POL31	P46957	487 aa		4.7	□□□□□ -1.66
NMD3	YHR170W	YJR054W	P47114	497 aa		4.7	□□□□□ -1.66
NMD3	YHR170W	SRB7	P47822	140 aa		4.7	□□□□□ -1.66
NMD3	YHR170W	ECL1	P48235	211 aa		4.7	□□□□□ -1.66
NMD3	YHR170W	YGR283C	P53336	341 aa	Predicted RBP	4.7	□□□□□ -1.66
NMD3	YHR170W	SPC98	P53540	846 aa		4.7	□□□□□ -1.66
NMD3	YHR170W	SNZ2	P53824	298 aa		4.7	□□□□□ -1.66
NMD3	YHR170W	STP1	Q00947	519 aa		4.7	□□□□□ -1.66
NMD3	YHR170W	INA17	Q02888	182 aa		4.7	□□□□□ -1.66
NMD3	YHR170W	RCR2	Q03446	210 aa	Known RBP	4.7	□□□□□ -1.66
NMD3	YHR170W	IVY1	Q04934	453 aa		4.7	□□□□□ -1.66
NMD3	YHR170W	YPR196W	Q06595	470 aa		4.7	□□□□□ -1.66
NMD3	YHR170W	DIS3	Q08162	1001 aa	Known RBP	4.7	□□□□□ -1.66
NMD3	YHR170W	APL5	Q08951	932 aa	Known RBP	4.7	□□□□□ -1.66
NMD3	YHR170W	PKH2	Q12236	1081 aa	Known RBP	4.7	□□□□□ -1.66
NMD3	YHR170W	CDC8	P00572	216 aa		4.69	□□□□□ -1.66
NMD3	YHR170W	TPK1	P06244	397 aa		4.69	□□□□□ -1.66
NMD3	YHR170W	HEM1	P09950	548 aa	Predicted RBP	4.69	□□□□□ -1.66
NMD3	YHR170W	ADK2	P26364	225 aa		4.69	□□□□□ -1.66
NMD3	YHR170W	SEC1	P30619	724 aa	Known RBP	4.69	□□□□□ -1.66
NMD3	YHR170W	CYS3	P31373	394 aa	Known RBP	4.69	□□□□□ -1.66
NMD3	YHR170W	MCM10	P32354	571 aa		4.69	□□□□□ -1.66
NMD3	YHR170W	PRP19	P32523	503 aa	Known RBP	4.69	□□□□□ -1.66
NMD3	YHR170W	BUD2	P33314	1104 aa		4.69	□□□□□ -1.66
NMD3	YHR170W	SRB2	P34162	210 aa		4.69	□□□□□ -1.66
NMD3	YHR170W	YBR056W	P38081	501 aa		4.69	□□□□□ -1.66
NMD3	YHR170W	MSG5	P38590	489 aa		4.69	□□□□□ -1.66
NMD3	YHR170W	LAM1	P38851	1228 aa		4.69	□□□□□ -1.66
NMD3	YHR170W	DSE1	P40077	573 aa		4.69	□□□□□ -1.66
NMD3	YHR170W	ESL1	P40456	1118 aa		4.69	□□□□□ -1.66
NMD3	YHR170W	MET13	P53128	600 aa		4.69	□□□□□ -1.66
NMD3	YHR170W	HOP2	P53187	214 aa		4.69	□□□□□ -1.66
NMD3	YHR170W	PBP1	P53297	722 aa	Known RBP	4.69	□□□□□ -1.66
NMD3	YHR170W	SNP1	Q00916	300 aa	Predicted RBP	4.69	□□□□□ -1.66
NMD3	YHR170W	UTP6	Q02354	440 aa	Known RBP	4.69	□□□□□ -1.66
NMD3	YHR170W	SFH1	Q06168	426 aa		4.69	□□□□□ -1.66
NMD3	YHR170W	MLC2	Q06580	163 aa		4.69	□□□□□ -1.66
NMD3	YHR170W	CDA2	Q06703	312 aa		4.69	□□□□□ -1.66
NMD3	YHR170W	REH1	Q06709	432 aa		4.69	□□□□□ -1.66
NMD3	YHR170W	ESC8	Q08119	714 aa		4.69	□□□□□ -1.66
NMD3	YHR170W	GAL80	P04387	435 aa		4.68	□□□□□ -1.66
NMD3	YHR170W	CDC31	P06704	161 aa	Known RBP	4.68	□□□□□ -1.66
NMD3	YHR170W	HOM3	P10869	527 aa		4.68	□□□□□ -1.66
NMD3	YHR170W	AEP2	P22136	580 aa		4.68	□□□□□ -1.66
NMD3	YHR170W	VPS3	P23643	1011 aa		4.68	□□□□□ -1.66
NMD3	YHR170W	HXT3	P32466	567 aa	Known RBP	4.68	□□□□□ -1.66
NMD3	YHR170W	GCS1	P35197	352 aa		4.68	□□□□□ -1.66
NMD3	YHR170W	SIF2	P38262	535 aa		4.68	□□□□□ -1.66
NMD3	YHR170W	SLX1	P38324	304 aa		4.68	□□□□□ -1.66
NMD3	YHR170W	VHC1	P38329	1120 aa		4.68	□□□□□ -1.66
NMD3	YHR170W	MMS21	P38632	267 aa		4.68	□□□□□ -1.66
NMD3	YHR170W	SAK1	P38990	1142 aa		4.68	□□□□□ -1.66
NMD3	YHR170W	MEF2	P39677	819 aa		4.68	□□□□□ -1.66
NMD3	YHR170W	SAW1	P39735	261 aa		4.68	□□□□□ -1.66
NMD3	YHR170W	ZRG8	P40021	1076 aa		4.68	□□□□□ -1.66
NMD3	YHR170W	YMR134W	P40207	237 aa		4.68	□□□□□ -1.66
NMD3	YHR170W	TMA108	P40462	946 aa		4.68	□□□□□ -1.66
NMD3	YHR170W	MND2	P40577	368 aa		4.68	□□□□□ -1.66
NMD3	YHR170W	SAP185	P40856	1058 aa		4.68	□□□□□ -1.66
NMD3	YHR170W	TCB2	P48231	1178 aa		4.68	□□□□□ -1.66
NMD3	YHR170W	TAN1	P53072	289 aa	Predicted RBP	4.68	□□□□□ -1.66
NMD3	YHR170W	YGR012W	P53206	393 aa		4.68	□□□□□ -1.66
NMD3	YHR170W	SNO2	P53823	222 aa		4.68	□□□□□ -1.66
NMD3	YHR170W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.68	□□□□□ -1.66	not detected
NMD3	YHR170W	YNL040W	P53960	456 aa	Predicted RBP	4.68	□□□□□ -1.66
NMD3	YHR170W	BET4	Q00618	327 aa		4.68	□□□□□ -1.66
NMD3	YHR170W	MTG1	Q03151	367 aa	Predicted RBP	4.68	□□□□□ -1.66
NMD3	YHR170W	ECM30	Q06673	1274 aa		4.68	□□□□□ -1.66
NMD3	YHR170W	AIM39	Q08223	395 aa		4.68	□□□□□ -1.66
NMD3	YHR170W	YDR056C	Q12025	205 aa		4.68	□□□□□ -1.66
NMD3	YHR170W	ARG4	P04076	463 aa	Predicted RBP	4.67	□□□□□ -1.66
NMD3	YHR170W	HIP1	P06775	603 aa		4.67	□□□□□ -1.66
NMD3	YHR170W	PMS1	P14242	873 aa		4.67	□□□□□ -1.66
NMD3	YHR170W	PUT4	P15380	627 aa		4.67	□□□□□ -1.66
NMD3	YHR170W	CBF1	P17106	351 aa		4.67	□□□□□ -1.66
NMD3	YHR170W	SFL1	P20134	766 aa		4.67	□□□□□ -1.66
NMD3	YHR170W	GAC1	P28006	793 aa		4.67	□□□□□ -1.66
NMD3	YHR170W	RPC82	P32349	654 aa		4.67	□□□□□ -1.66
NMD3	YHR170W	SPC29	P33419	253 aa		4.67	□□□□□ -1.66
NMD3	YHR170W	CCL1	P37366	393 aa		4.67	□□□□□ -1.66
NMD3	YHR170W	YMC2	P38087	329 aa		4.67	□□□□□ -1.66
NMD3	YHR170W	OLA1	P38219	394 aa	Known RBP	4.67	□□□□□ -1.66
NMD3	YHR170W	MUM2	P38236	366 aa		4.67	□□□□□ -1.66
NMD3	YHR170W	HSL7	P38274	827 aa		4.67	□□□□□ -1.66
NMD3	YHR170W	SPP381	P38282	291 aa	Predicted RBP	4.67	□□□□□ -1.66
NMD3	YHR170W	SWC5	P38326	303 aa		4.67	□□□□□ -1.66
NMD3	YHR170W	PCM1	P38628	557 aa	Known RBP	4.67	□□□□□ -1.66
NMD3	YHR170W	FLC2	P39719	783 aa		4.67	□□□□□ -1.66
NMD3	YHR170W	YIL054W	P40524	105 aa		4.67	□□□□□ -1.66
NMD3	YHR170W	RSC8	P43609	557 aa	Known RBP	4.67	□□□□□ -1.66
NMD3	YHR170W	BNA1	P47096	177 aa		4.67	□□□□□ -1.66
NMD3	YHR170W	YJR096W	P47137	282 aa		4.67	□□□□□ -1.66
NMD3	YHR170W	YML6	P51998	286 aa		4.67	□□□□□ -1.66
NMD3	YHR170W	PNG1	Q02890	363 aa		4.67	□□□□□ -1.66
NMD3	YHR170W	YDR132C	Q03900	495 aa		4.67	□□□□□ -1.66
NMD3	YHR170W	SXM1	Q04175	944 aa	Known RBP	4.67	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms