RNA–Protein interactions for RNA: YHR053C

CUP1-1, Transcript of Metallothionein, yeast

Gene CUP1-1, Length 186 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CUP1-1	YHR053C	PXL1	P36166	706 aa		4.29	□□□□□ -1.72
CUP1-1	YHR053C	UBP13	P38187	747 aa		4.29	□□□□□ -1.72
CUP1-1	YHR053C	IFA38	P38286	347 aa		4.29	□□□□□ -1.72
CUP1-1	YHR053C	GND1	P38720	489 aa	Known RBP	4.29	□□□□□ -1.72
CUP1-1	YHR053C	YGL036W	P53185	909 aa	Predicted RBP	4.29	□□□□□ -1.72
CUP1-1	YHR053C	PFA5	Q03289	374 aa		4.29	□□□□□ -1.72
CUP1-1	YHR053C	ATG16	Q03818	150 aa		4.29	□□□□□ -1.72
CUP1-1	YHR053C	PSR2	Q07949	397 aa		4.29	□□□□□ -1.72
CUP1-1	YHR053C	DSE3	Q08729	430 aa		4.29	□□□□□ -1.72
CUP1-1	YHR053C	GEX2	P36173	615 aa		4.28	□□□□□ -1.72
CUP1-1	YHR053C	AAP1	P37898	856 aa	Known RBP	4.28	□□□□□ -1.72
CUP1-1	YHR053C	VPS41	P38959	992 aa		4.28	□□□□□ -1.72
CUP1-1	YHR053C	CTF18	P49956	741 aa		4.28	□□□□□ -1.72
CUP1-1	YHR053C	LSC1	P53598	329 aa	Known RBP	4.28	□□□□□ -1.72
CUP1-1	YHR053C	POS5	Q06892	414 aa		4.28	□□□□□ -1.72
CUP1-1	YHR053C	FRE3	Q08905	711 aa		4.28	□□□□□ -1.72
CUP1-1	YHR053C	PCD1	Q12524	340 aa		4.28	□□□□□ -1.72
CUP1-1	YHR053C	YER145C-A	A0A023PYF4	145 aa		4.27	□□□□□ -1.73
CUP1-1	YHR053C	SRP54	P20424	541 aa	Known RBP	4.27	□□□□□ -1.73
CUP1-1	YHR053C	SRB5	P32585	307 aa		4.27	□□□□□ -1.73
CUP1-1	YHR053C	CNS1	P33313	385 aa		4.27	□□□□□ -1.73
CUP1-1	YHR053C	NTR2	P36118	322 aa	Predicted RBP	4.27	□□□□□ -1.73
CUP1-1	YHR053C	PSY4	P38193	441 aa		4.27	□□□□□ -1.73
CUP1-1	YHR053C	SEC31	P38968	1273 aa	Known RBP	4.27	□□□□□ -1.73
CUP1-1	YHR053C	VRG4	P40107	337 aa		4.27	□□□□□ -1.73
CUP1-1	YHR053C	PFK26	P40433	827 aa	Known RBP	4.27	□□□□□ -1.73
CUP1-1	YHR053C	EAF7	P53911	425 aa	Known RBP	4.27	□□□□□ -1.73
CUP1-1	YHR053C	NUP53	Q03790	475 aa		4.27	□□□□□ -1.73
CUP1-1	YHR053C	BUD7	Q08754	746 aa		4.27	□□□□□ -1.73
CUP1-1	YHR053C	YLR302C	O13544	120 aa		4.26	□□□□□ -1.73
CUP1-1	YHR053C	RIC1	P40395	1056 aa		4.26	□□□□□ -1.73
CUP1-1	YHR053C	PSP1	P50896	841 aa	Known RBP	4.26	□□□□□ -1.73
CUP1-1	YHR053C	SCS3	P53012	380 aa		4.26	□□□□□ -1.73
CUP1-1	YHR053C	RTS3	P53289	263 aa		4.26	□□□□□ -1.73
CUP1-1	YHR053C	CAC2	Q04199	468 aa		4.26	□□□□□ -1.73
CUP1-1	YHR053C	ECI1	Q05871	280 aa		4.26	□□□□□ -1.73
CUP1-1	YHR053C	SRL1	Q08673	210 aa		4.26	□□□□□ -1.73
CUP1-1	YHR053C	YPT1	P01123	206 aa	Known RBP	4.25	□□□□□ -1.73
CUP1-1	YHR053C	PET111	P08468	800 aa		4.25	□□□□□ -1.73
CUP1-1	YHR053C	RAP1	P11938	827 aa		4.25	□□□□□ -1.73
CUP1-1	YHR053C	PWP2	P25635	923 aa	Known RBP	4.25	□□□□□ -1.73
CUP1-1	YHR053C	CTK2	P46962	323 aa		4.25	□□□□□ -1.73
CUP1-1	YHR053C	GTR1	Q00582	310 aa		4.25	□□□□□ -1.73
CUP1-1	YHR053C	REG1	Q00816	1014 aa		4.25	□□□□□ -1.73
CUP1-1	YHR053C	RSM28	Q03430	361 aa		4.25	□□□□□ -1.73
CUP1-1	YHR053C	MLH2	Q07980	695 aa		4.25	□□□□□ -1.73
CUP1-1	YHR053C	NUS1	Q12063	375 aa		4.25	□□□□□ -1.73
CUP1-1	YHR053C	YLR112W	Q12130	139 aa		4.25	□□□□□ -1.73
CUP1-1	YHR053C	RPL42A	P0CX27	106 aa	Known RBP	4.24	□□□□□ -1.73
CUP1-1	YHR053C	RPL42B	P0CX28	106 aa	Known RBP	4.24	□□□□□ -1.73
CUP1-1	YHR053C	VPS24	P36095	224 aa	Known RBP	4.24	□□□□□ -1.73
CUP1-1	YHR053C	ECM10	P39987	644 aa		4.24	□□□□□ -1.73
CUP1-1	YHR053C	YIL152W	P40455	235 aa		4.24	□□□□□ -1.73
CUP1-1	YHR053C	SWP82	P43554	623 aa		4.24	□□□□□ -1.73
CUP1-1	YHR053C	IML2	P47031	731 aa		4.24	□□□□□ -1.73
CUP1-1	YHR053C	IZH1	Q03419	316 aa		4.24	□□□□□ -1.73
CUP1-1	YHR053C	YMR034C	Q05131	434 aa	Predicted RBP	4.24	□□□□□ -1.73
CUP1-1	YHR053C	UTP21	Q06078	939 aa	Predicted RBP	4.24	□□□□□ -1.73
CUP1-1	YHR053C	MCP2	Q06567	569 aa		4.24	□□□□□ -1.73
CUP1-1	YHR053C	TKL1	P23254	680 aa	Known RBP	4.23	□□□□□ -1.73
CUP1-1	YHR053C	ERG8	P24521	451 aa		4.23	□□□□□ -1.73
CUP1-1	YHR053C	STE50	P25344	346 aa		4.23	□□□□□ -1.73
CUP1-1	YHR053C	SAC1	P32368	623 aa	Known RBP	4.23	□□□□□ -1.73
CUP1-1	YHR053C	SLC1	P33333	303 aa		4.23	□□□□□ -1.73
CUP1-1	YHR053C	ARC40	P38328	384 aa	Known RBP	4.23	□□□□□ -1.73
CUP1-1	YHR053C	PCL6	P40038	420 aa		4.23	□□□□□ -1.73
CUP1-1	YHR053C	IES5	P40060	125 aa		4.23	□□□□□ -1.73
CUP1-1	YHR053C	KAP123	P40069	1113 aa	Known RBP	4.23	□□□□□ -1.73
CUP1-1	YHR053C	RPN11	P43588	306 aa	Known RBP	4.23	□□□□□ -1.73
CUP1-1	YHR053C	VPS4	P52917	437 aa		4.23	□□□□□ -1.73
CUP1-1	YHR053C	YGR021W	P53212	290 aa		4.23	□□□□□ -1.73
CUP1-1	YHR053C	IST1	P53843	298 aa	Predicted RBP	4.23	□□□□□ -1.73
CUP1-1	YHR053C	TFC6	Q06339	672 aa		4.23	□□□□□ -1.73
CUP1-1	YHR053C	VCX1	Q99385	411 aa		4.23	□□□□□ -1.73
CUP1-1	YHR053C	HXK2	P04807	486 aa	Known RBP	4.22	□□□□□ -1.73
CUP1-1	YHR053C	SNF1	P06782	633 aa	Known RBP	4.22	□□□□□ -1.73
CUP1-1	YHR053C	CHO1	P08456	276 aa		4.22	□□□□□ -1.73
CUP1-1	YHR053C	ESL2	P36168	1195 aa		4.22	□□□□□ -1.73
CUP1-1	YHR053C	MNN2	P38069	597 aa		4.22	□□□□□ -1.73
CUP1-1	YHR053C	STB2	P46679	850 aa		4.22	□□□□□ -1.73
CUP1-1	YHR053C	YNL234W	P53857	426 aa		4.22	□□□□□ -1.73
CUP1-1	YHR053C	ASI1	P54074	624 aa		4.22	□□□□□ -1.73
CUP1-1	YHR053C	TDA9	Q04545	1251 aa		4.22	□□□□□ -1.73
CUP1-1	YHR053C	YLR281C	Q05863	155 aa		4.22	□□□□□ -1.73
CUP1-1	YHR053C	VID22	Q05934	901 aa		4.22	□□□□□ -1.73
CUP1-1	YHR053C	TRM8	Q12009	286 aa		4.22	□□□□□ -1.73
CUP1-1	YHR053C	CBP1	P07252	654 aa		4.21	□□□□□ -1.74
CUP1-1	YHR053C	YCR043C	P25361	127 aa		4.21	□□□□□ -1.74
CUP1-1	YHR053C	STV1	P37296	890 aa		4.21	□□□□□ -1.74
CUP1-1	YHR053C	MET30	P39014	640 aa		4.21	□□□□□ -1.74
CUP1-1	YHR053C	YIL169C	P40442	995 aa		4.21	□□□□□ -1.74
CUP1-1	YHR053C	RRT6	P53117	311 aa	Predicted RBP	4.21	□□□□□ -1.74
CUP1-1	YHR053C	YNL181W	P53878	407 aa		4.21	□□□□□ -1.74
CUP1-1	YHR053C	ARP10	Q04549	284 aa		4.21	□□□□□ -1.74
CUP1-1	YHR053C	YOR019W	Q99248	730 aa		4.21	□□□□□ -1.74
CUP1-1	YHR053C	KRS1	P15180	591 aa	Known RBP	4.2	□□□□□ -1.74
CUP1-1	YHR053C	YUR1	P26725	428 aa		4.2	□□□□□ -1.74
CUP1-1	YHR053C	TES1	P41903	349 aa	Known RBP	4.2	□□□□□ -1.74
CUP1-1	YHR053C	YFR020W	P43600	232 aa		4.2	□□□□□ -1.74
CUP1-1	YHR053C	NNF2	P53253	936 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 20.9 ms