RNA–Protein interactions for RNA: YHR012W

VPS29, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS29, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS29YHR012W MSH1P25846 959 aa4.89□□□□□ -1.63
VPS29YHR012W CWP1P28319 239 aa4.89□□□□□ -1.63
VPS29YHR012W SPR1P32603 445 aa4.89□□□□□ -1.63
VPS29YHR012W SCD5P34758 872 aa4.89□□□□□ -1.63
VPS29YHR012W ALY1P36117 915 aa4.89□□□□□ -1.63
VPS29YHR012W YBR259WP38338 688 aa4.89□□□□□ -1.63
VPS29YHR012W RTT107P38850 1070 aa4.89□□□□□ -1.63
VPS29YHR012W FLC2P39719 783 aa4.89□□□□□ -1.63
VPS29YHR012W YAL037WP39728 267 aa4.89□□□□□ -1.63
VPS29YHR012W RGI2P40188 164 aa4.89□□□□□ -1.63
VPS29YHR012W ATM1P40416 690 aa4.89□□□□□ -1.63
VPS29YHR012W CIS3P47001 227 aa4.89□□□□□ -1.63
VPS29YHR012W BIR1P47134 954 aa4.89□□□□□ -1.63
VPS29YHR012W HLJ1P48353 224 aa4.89□□□□□ -1.63
VPS29YHR012W YML6P51998 286 aa4.89□□□□□ -1.63
VPS29YHR012W MTO1P53070 669 aa4.89□□□□□ -1.63
VPS29YHR012W STR3P53101 465 aaKnown RBP4.89□□□□□ -1.63
VPS29YHR012W CUZ1P53899 274 aa4.89□□□□□ -1.63
VPS29YHR012W EFM6P53970 246 aa4.89□□□□□ -1.63
VPS29YHR012W REG1Q00816 1014 aa4.89□□□□□ -1.63
VPS29YHR012W POB3Q04636 552 aaKnown RBP4.89□□□□□ -1.63
VPS29YHR012W PLB3Q08108 686 aa4.89□□□□□ -1.63
VPS29YHR012W CBC2Q08920 208 aaKnown RBP RIP-Chip data4.89□□□□□ -1.63not detected
VPS29YHR012W YLL056CQ12177 298 aa4.89□□□□□ -1.63
VPS29YHR012W SUL2Q12325 893 aa4.89□□□□□ -1.63
VPS29YHR012W OCA6Q12454 224 aa4.89□□□□□ -1.63
VPS29YHR012W YPR089WO13585 888 aa4.88□□□□□ -1.63
VPS29YHR012W COX5AP00424 153 aa4.88□□□□□ -1.63
VPS29YHR012W SCL1P21243 252 aaKnown RBP4.88□□□□□ -1.63
VPS29YHR012W EPT1P22140 391 aa4.88□□□□□ -1.63
VPS29YHR012W YSP3P25036 478 aa4.88□□□□□ -1.63
VPS29YHR012W DCC1P25559 380 aa4.88□□□□□ -1.63
VPS29YHR012W YCR015CP25616 317 aa4.88□□□□□ -1.63
VPS29YHR012W AEP1P32493 518 aa4.88□□□□□ -1.63
VPS29YHR012W EBP2P36049 427 aaKnown RBP4.88□□□□□ -1.63
VPS29YHR012W PIM1P36775 1133 aa4.88□□□□□ -1.63
VPS29YHR012W MAK5P38112 773 aaPredicted RBP4.88□□□□□ -1.63
VPS29YHR012W SMF1P38925 575 aa4.88□□□□□ -1.63
VPS29YHR012W ALR2P43553 858 aa4.88□□□□□ -1.63
VPS29YHR012W KAP114P53067 1004 aa4.88□□□□□ -1.63
VPS29YHR012W SIW14P53965 281 aa4.88□□□□□ -1.63
VPS29YHR012W ERG5P54781 538 aa4.88□□□□□ -1.63
VPS29YHR012W SSL2Q00578 843 aa4.88□□□□□ -1.63
VPS29YHR012W DFG5Q05031 458 aa4.88□□□□□ -1.63
VPS29YHR012W ADY3Q07732 790 aa4.88□□□□□ -1.63
VPS29YHR012W YLR001CQ07895 862 aa4.88□□□□□ -1.63
VPS29YHR012W BUD7Q08754 746 aa4.88□□□□□ -1.63
VPS29YHR012W HOS1Q12214 470 aa4.88□□□□□ -1.63
VPS29YHR012W SEC39Q12745 709 aa4.88□□□□□ -1.63
VPS29YHR012W YLR462WO13556 202 aa4.87□□□□□ -1.63
VPS29YHR012W MDM35O60200 86 aa4.87□□□□□ -1.63
VPS29YHR012W ACO1P19414 778 aaKnown RBP RIP-Chip data4.87□□□□□ -1.63not detected
VPS29YHR012W BEM1P29366 551 aa4.87□□□□□ -1.63
VPS29YHR012W NDI1P32340 513 aa4.87□□□□□ -1.63
VPS29YHR012W HEM12P32347 362 aaPredicted RBP4.87□□□□□ -1.63
VPS29YHR012W HXT3P32466 567 aaKnown RBP4.87□□□□□ -1.63
VPS29YHR012W TFC3P34111 1160 aa4.87□□□□□ -1.63
VPS29YHR012W STB6P36085 766 aa4.87□□□□□ -1.63
VPS29YHR012W RKM3P38222 552 aa4.87□□□□□ -1.63
VPS29YHR012W IML3P38265 245 aa4.87□□□□□ -1.63
VPS29YHR012W YHL049CP38722 271 aa4.87□□□□□ -1.63
VPS29YHR012W SKN7P38889 622 aa4.87□□□□□ -1.63
VPS29YHR012W YAT2P40017 923 aa4.87□□□□□ -1.63
VPS29YHR012W ATG3P40344 310 aa4.87□□□□□ -1.63
VPS29YHR012W YFL064CP43540 174 aa4.87□□□□□ -1.63
VPS29YHR012W YGR266WP53326 701 aa4.87□□□□□ -1.63
VPS29YHR012W NOP15P53927 220 aaPredicted RBP4.87□□□□□ -1.63
VPS29YHR012W VAC7P53950 1165 aa4.87□□□□□ -1.63
VPS29YHR012W ADE12P80210 433 aaKnown RBP4.87□□□□□ -1.63
VPS29YHR012W YMR160WQ03823 816 aa4.87□□□□□ -1.63
VPS29YHR012W SIZ1Q04195 904 aa4.87□□□□□ -1.63
VPS29YHR012W UFO1Q04511 668 aa4.87□□□□□ -1.63
VPS29YHR012W VPS38Q05919 439 aa4.87□□□□□ -1.63
VPS29YHR012W DIC1Q06143 298 aa4.87□□□□□ -1.63
VPS29YHR012W ESC2Q06340 456 aa4.87□□□□□ -1.63
VPS29YHR012W MCP2Q06567 569 aa4.87□□□□□ -1.63
VPS29YHR012W TRM8Q12009 286 aa4.87□□□□□ -1.63
VPS29YHR012W YBL111CQ3E7Y5 667 aa4.87□□□□□ -1.63
VPS29YHR012W AI5_ALPHAQ9ZZX1 630 aa4.87□□□□□ -1.63
VPS29YHR012W RIP1P08067 215 aa4.86□□□□□ -1.63
VPS29YHR012W TUB1P09733 447 aaKnown RBP4.86□□□□□ -1.63
VPS29YHR012W GAL11P19659 1081 aa4.86□□□□□ -1.63
VPS29YHR012W RFA2P26754 273 aaKnown RBP4.86□□□□□ -1.63
VPS29YHR012W KNS1P32350 737 aaPredicted RBP4.86□□□□□ -1.63
VPS29YHR012W HXT1P32465 570 aa4.86□□□□□ -1.63
VPS29YHR012W PEX5P35056 612 aa4.86□□□□□ -1.63
VPS29YHR012W PHO11P35842 467 aa4.86□□□□□ -1.63
VPS29YHR012W MIC60P36112 540 aa4.86□□□□□ -1.63
VPS29YHR012W GMH1P36125 273 aa4.86□□□□□ -1.63
VPS29YHR012W PHO12P38693 467 aa4.86□□□□□ -1.63
VPS29YHR012W DBP8P38719 431 aa4.86□□□□□ -1.63
VPS29YHR012W SET5P38890 526 aaKnown RBP4.86□□□□□ -1.63
VPS29YHR012W CYC2P38909 366 aa4.86□□□□□ -1.63
VPS29YHR012W CKB2P38930 258 aa4.86□□□□□ -1.63
VPS29YHR012W ZIM17P42844 174 aa4.86□□□□□ -1.63
VPS29YHR012W CTK3P46963 296 aaPredicted RBP4.86□□□□□ -1.63
VPS29YHR012W NNF1P47149 201 aa4.86□□□□□ -1.63
VPS29YHR012W COG1P53079 417 aa4.86□□□□□ -1.63
VPS29YHR012W TIM13P53299 105 aa4.86□□□□□ -1.63
VPS29YHR012W CPR6P53691 371 aaKnown RBP4.86□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms