RNA–Protein interactions for RNA: YHL006C

SHU1, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU1YHL006C ELO1P39540 310 aa13.28□□□□□ -0.28
SHU1YHL006C FET5P43561 622 aa13.28□□□□□ -0.28
SHU1YHL006C YGL108CP53139 140 aa13.28□□□□□ -0.28
SHU1YHL006C EFM6P53970 246 aa13.28□□□□□ -0.28
SHU1YHL006C URH1Q04179 340 aa13.28□□□□□ -0.28
SHU1YHL006C EMI1Q04406 187 aa13.28□□□□□ -0.28
SHU1YHL006C IMA2Q08295 589 aa13.28□□□□□ -0.28
SHU1YHL006C SLD7Q08457 257 aa13.28□□□□□ -0.28
SHU1YHL006C TGL5Q12043 749 aa13.28□□□□□ -0.28
SHU1YHL006C CYC2P38909 366 aa13.27□□□□□ -0.29
SHU1YHL006C DPH1P40487 425 aaKnown RBP13.27□□□□□ -0.29
SHU1YHL006C TGL2P54857 326 aa13.27□□□□□ -0.29
SHU1YHL006C TRS31Q03337 283 aa13.27□□□□□ -0.29
SHU1YHL006C BNA5Q05979 453 aa13.27□□□□□ -0.29
SHU1YHL006C PPH21P23594 369 aa13.26□□□□□ -0.29
SHU1YHL006C SPR1P32603 445 aa13.26□□□□□ -0.29
SHU1YHL006C VHC1P38329 1120 aa13.26□□□□□ -0.29
SHU1YHL006C POP4P38336 279 aa13.26□□□□□ -0.29
SHU1YHL006C DBP8P38719 431 aa13.26□□□□□ -0.29
SHU1YHL006C UME6P39001 836 aa13.26□□□□□ -0.29
SHU1YHL006C IRR1P40541 1150 aa13.26□□□□□ -0.29
SHU1YHL006C CDC73Q06697 393 aa13.26□□□□□ -0.29
SHU1YHL006C BUD20Q08004 166 aaPredicted RBP13.26□□□□□ -0.29
SHU1YHL006C RED1P14291 827 aa13.25□□□□□ -0.29
SHU1YHL006C MGT1P26188 188 aa13.25□□□□□ -0.29
SHU1YHL006C CNS1P33313 385 aa13.25□□□□□ -0.29
SHU1YHL006C GMH1P36125 273 aa13.25□□□□□ -0.29
SHU1YHL006C LDB7P38210 180 aa13.25□□□□□ -0.29
SHU1YHL006C SEO1P39709 593 aa13.25□□□□□ -0.29
SHU1YHL006C MCM16Q12262 181 aa13.25□□□□□ -0.29
SHU1YHL006C SMI1P32566 505 aa13.24□□□□□ -0.29
SHU1YHL006C YFL012WP43580 148 aa13.24□□□□□ -0.29
SHU1YHL006C YFR018CP43599 363 aa13.24□□□□□ -0.29
SHU1YHL006C CPR6P53691 371 aaKnown RBP13.24□□□□□ -0.29
SHU1YHL006C NOP15P53927 220 aaPredicted RBP13.24□□□□□ -0.29
SHU1YHL006C ARX1Q03862 593 aaKnown RBP13.24□□□□□ -0.29
SHU1YHL006C PLB3Q08108 686 aa13.24□□□□□ -0.29
SHU1YHL006C BUD7Q08754 746 aa13.24□□□□□ -0.29
SHU1YHL006C ACM1Q08981 209 aa13.24□□□□□ -0.29
SHU1YHL006C RMD5Q12508 421 aa13.24□□□□□ -0.29
SHU1YHL006C BRR2P32639 2163 aaKnown RBP13.24□□□□□ -0.29
SHU1YHL006C GAL4P04386 881 aa13.23□□□□□ -0.29
SHU1YHL006C TEC1P18412 486 aa13.23□□□□□ -0.29
SHU1YHL006C YCL068CP25593 260 aa13.23□□□□□ -0.29
SHU1YHL006C CDC20P26309 610 aa13.23□□□□□ -0.29
SHU1YHL006C PDR3P33200 976 aa13.23□□□□□ -0.29
SHU1YHL006C YBR238CP38330 731 aaKnown RBP13.23□□□□□ -0.29
SHU1YHL006C MEF2P39677 819 aa13.23□□□□□ -0.29
SHU1YHL006C ALG8P40351 577 aa13.23□□□□□ -0.29
SHU1YHL006C NUP85P46673 744 aa13.23□□□□□ -0.29
SHU1YHL006C NMD5P46970 1048 aa13.23□□□□□ -0.29
SHU1YHL006C ATG36P46983 293 aa13.23□□□□□ -0.29
SHU1YHL006C UTP6Q02354 440 aaKnown RBP13.23□□□□□ -0.29
SHU1YHL006C CPA1P07258 411 aaKnown RBP13.22□□□□□ -0.29
SHU1YHL006C YML002WP0CF17 737 aa13.22□□□□□ -0.29
SHU1YHL006C AMD1P15274 810 aaKnown RBP13.22□□□□□ -0.29
SHU1YHL006C VAN1P23642 535 aa13.22□□□□□ -0.29
SHU1YHL006C PHO84P25297 587 aaKnown RBP13.22□□□□□ -0.29
SHU1YHL006C GTS1P40956 396 aa13.22□□□□□ -0.29
SHU1YHL006C BIR1P47134 954 aa13.22□□□□□ -0.29
SHU1YHL006C RPN9Q04062 393 aaKnown RBP13.22□□□□□ -0.29
SHU1YHL006C YIL046W-AQ3E7Z4 54 aa13.22□□□□□ -0.29
SHU1YHL006C SPS1P08458 490 aa13.21□□□□□ -0.29
SHU1YHL006C ERG20P08524 352 aaKnown RBP13.21□□□□□ -0.29
SHU1YHL006C SCL1P21243 252 aaKnown RBP13.21□□□□□ -0.29
SHU1YHL006C PRP18P33411 251 aaPredicted RBP13.21□□□□□ -0.29
SHU1YHL006C WBP1P33767 430 aaKnown RBP13.21□□□□□ -0.29
SHU1YHL006C MRP21P38175 177 aa13.21□□□□□ -0.29
SHU1YHL006C NDC80P40460 691 aa13.21□□□□□ -0.29
SHU1YHL006C ZIM17P42844 174 aa13.21□□□□□ -0.29
SHU1YHL006C RTA1P53047 317 aa13.21□□□□□ -0.29
SHU1YHL006C ADY3Q07732 790 aa13.21□□□□□ -0.29
SHU1YHL006C MPC54Q08550 464 aa13.21□□□□□ -0.29
SHU1YHL006C CWP1P28319 239 aa13.2□□□□□ -0.3
SHU1YHL006C GCG1P32656 232 aaKnown RBP13.2□□□□□ -0.3
SHU1YHL006C TFC3P34111 1160 aa13.2□□□□□ -0.3
SHU1YHL006C ACO2P39533 789 aa13.2□□□□□ -0.3
SHU1YHL006C IME4P41833 600 aa13.2□□□□□ -0.3
SHU1YHL006C PXA1P41909 870 aa13.2□□□□□ -0.3
SHU1YHL006C TY4A-JP47023 414 aa13.2□□□□□ -0.3
SHU1YHL006C HXT16P47185 567 aa13.2□□□□□ -0.3
SHU1YHL006C HXT15P54854 567 aa13.2□□□□□ -0.3
SHU1YHL006C NHX1Q04121 633 aa13.2□□□□□ -0.3
SHU1YHL006C RCO1Q04779 684 aa13.2□□□□□ -0.3
SHU1YHL006C HRK1Q08732 759 aaKnown RBP13.2□□□□□ -0.3
SHU1YHL006C GCR1P07261 785 aa13.19□□□□□ -0.3
SHU1YHL006C YSR3P23501 404 aa13.19□□□□□ -0.3
SHU1YHL006C BEM1P29366 551 aa13.19□□□□□ -0.3
SHU1YHL006C SFP1P32432 683 aa13.19□□□□□ -0.3
SHU1YHL006C PEX5P35056 612 aa13.19□□□□□ -0.3
SHU1YHL006C MAD1P40957 749 aa13.19□□□□□ -0.3
SHU1YHL006C ARP4P80428 489 aa13.19□□□□□ -0.3
SHU1YHL006C PET117Q02771 107 aa13.19□□□□□ -0.3
SHU1YHL006C ABF1P14164 731 aa13.18□□□□□ -0.3
SHU1YHL006C CBF1P17106 351 aa13.18□□□□□ -0.3
SHU1YHL006C VPS34P22543 875 aa13.18□□□□□ -0.3
SHU1YHL006C MAK5P38112 773 aaPredicted RBP13.18□□□□□ -0.3
SHU1YHL006C CEM1P39525 442 aa13.18□□□□□ -0.3
SHU1YHL006C VTI1Q04338 217 aa13.18□□□□□ -0.3
SHU1YHL006C HFA1P32874 2273 aa13.18□□□□□ -0.3
Retrieved 100 of 5,963 RNA–protein pairs in 51.4 ms