RNA–Protein interactions for RNA: YGR109W-B

YGR109W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YGR109W-B, Length 4,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR109W-BYGR109W-B YDL121CQ07541 149 aa1.68□□□□□ -2.14
YGR109W-BYGR109W-B VPS5Q92331 675 aa1.68□□□□□ -2.14
YGR109W-BYGR109W-B STU1P38198 1513 aa1.68□□□□□ -2.14
YGR109W-BYGR109W-B TRA1P38811 3744 aa1.68□□□□□ -2.14
YGR109W-BYGR109W-B CET1O13297 549 aaPredicted RBP1.68□□□□□ -2.14
YGR109W-BYGR109W-B PUT4P15380 627 aa1.68□□□□□ -2.14
YGR109W-BYGR109W-B VPS33P20795 691 aa1.68□□□□□ -2.14
YGR109W-BYGR109W-B PWP1P21304 576 aaKnown RBP1.68□□□□□ -2.14
YGR109W-BYGR109W-B NTG1P31378 399 aa1.68□□□□□ -2.14
YGR109W-BYGR109W-B SWH1P35845 1188 aa1.68□□□□□ -2.14
YGR109W-BYGR109W-B MSG5P38590 489 aa1.68□□□□□ -2.14
YGR109W-BYGR109W-B YNL195CP40168 261 aa1.68□□□□□ -2.14
YGR109W-BYGR109W-B LRO1P40345 661 aa1.68□□□□□ -2.14
YGR109W-BYGR109W-B PRM2P40534 656 aa1.68□□□□□ -2.14
YGR109W-BYGR109W-B CFD1P40558 293 aa1.68□□□□□ -2.14
YGR109W-BYGR109W-B BUD17P53727 317 aa1.68□□□□□ -2.14
YGR109W-BYGR109W-B MDM1Q01846 1127 aa1.68□□□□□ -2.14
YGR109W-BYGR109W-B GIR2Q03768 265 aaPredicted RBP1.68□□□□□ -2.14
YGR109W-BYGR109W-B VAC14Q06708 880 aa1.68□□□□□ -2.14
YGR109W-BYGR109W-B BUD21Q08492 214 aaPredicted RBP1.68□□□□□ -2.14
YGR109W-BYGR109W-B HSP42Q12329 375 aa1.68□□□□□ -2.14
YGR109W-BYGR109W-B RMP1Q12530 201 aa1.68□□□□□ -2.14
YGR109W-BYGR109W-B USO1P25386 1790 aa1.68□□□□□ -2.14
YGR109W-BYGR109W-B LEU2P04173 364 aaPredicted RBP1.67□□□□□ -2.14
YGR109W-BYGR109W-B PRE4P30657 266 aa1.67□□□□□ -2.14
YGR109W-BYGR109W-B MRPL7P36519 292 aa1.67□□□□□ -2.14
YGR109W-BYGR109W-B OTU2P38747 307 aaKnown RBP1.67□□□□□ -2.14
YGR109W-BYGR109W-B POP2P39008 433 aa1.67□□□□□ -2.14
YGR109W-BYGR109W-B PKP1P40530 394 aa1.67□□□□□ -2.14
YGR109W-BYGR109W-B MDR1P53258 950 aa1.67□□□□□ -2.14
YGR109W-BYGR109W-B TRS23Q03784 219 aa1.67□□□□□ -2.14
YGR109W-BYGR109W-B ATC1Q04005 294 aa1.67□□□□□ -2.14
YGR109W-BYGR109W-B NEW1Q08972 1196 aaKnown RBP1.67□□□□□ -2.14
YGR109W-BYGR109W-B TIP41Q12199 356 aa1.67□□□□□ -2.14
YGR109W-BYGR109W-B YDR061WQ12298 539 aa1.67□□□□□ -2.14
YGR109W-BYGR109W-B SMC6Q12749 1114 aa1.67□□□□□ -2.14
YGR109W-BYGR109W-B TRX2P22803 104 aaKnown RBP1.67□□□□□ -2.14
YGR109W-BYGR109W-B OAF3P36023 863 aa1.67□□□□□ -2.14
YGR109W-BYGR109W-B YJL043WP47053 257 aa1.67□□□□□ -2.14
YGR109W-BYGR109W-B SPC105P53148 917 aa1.67□□□□□ -2.14
YGR109W-BYGR109W-B MNP1P53163 194 aaPredicted RBP1.67□□□□□ -2.14
YGR109W-BYGR109W-B PEF1P53238 335 aa1.67□□□□□ -2.14
YGR109W-BYGR109W-B ALG12P53730 551 aa1.67□□□□□ -2.14
YGR109W-BYGR109W-B YNL018CP53976 612 aa1.67□□□□□ -2.14
YGR109W-BYGR109W-B SVL3Q03088 825 aaKnown RBP1.67□□□□□ -2.14
YGR109W-BYGR109W-B USA1Q03714 838 aa1.67□□□□□ -2.14
YGR109W-BYGR109W-B STP4Q07351 490 aa1.67□□□□□ -2.14
YGR109W-BYGR109W-B MED4Q12343 284 aa1.67□□□□□ -2.14
YGR109W-BYGR109W-B YML002WP0CF17 737 aa1.67□□□□□ -2.14
YGR109W-BYGR109W-B SEC65P29478 273 aa1.67□□□□□ -2.14
YGR109W-BYGR109W-B ATP11P32453 318 aa1.67□□□□□ -2.14
YGR109W-BYGR109W-B XRS2P33301 854 aa1.67□□□□□ -2.14
YGR109W-BYGR109W-B NTC20P38302 140 aaPredicted RBP1.67□□□□□ -2.14
YGR109W-BYGR109W-B SLX1P38324 304 aa1.67□□□□□ -2.14
YGR109W-BYGR109W-B JEM1P40358 645 aa1.67□□□□□ -2.14
YGR109W-BYGR109W-B TDA10P42938 290 aa1.67□□□□□ -2.14
YGR109W-BYGR109W-B SLD3P53135 668 aa1.67□□□□□ -2.14
YGR109W-BYGR109W-B SQS1P53866 767 aaKnown RBP1.67□□□□□ -2.14
YGR109W-BYGR109W-B PCD1Q12524 340 aa1.67□□□□□ -2.14
YGR109W-BYGR109W-B YOL087CQ99247 1116 aa1.67□□□□□ -2.14
YGR109W-BYGR109W-B SMC4Q12267 1418 aa1.67□□□□□ -2.14
YGR109W-BYGR109W-B PAB1P04147 577 aaKnown RBP RIP-Chip data1.67□□□□□ -2.14not detected
YGR109W-BYGR109W-B SEC53P07283 254 aaKnown RBP1.67□□□□□ -2.14
YGR109W-BYGR109W-B HMG2P12684 1045 aa1.67□□□□□ -2.14
YGR109W-BYGR109W-B TRX1P22217 103 aaKnown RBP1.67□□□□□ -2.14
YGR109W-BYGR109W-B URE2P23202 354 aaKnown RBP1.67□□□□□ -2.14
YGR109W-BYGR109W-B CLB3P24870 427 aa1.67□□□□□ -2.14
YGR109W-BYGR109W-B CWH43P25618 953 aa1.67□□□□□ -2.14
YGR109W-BYGR109W-B DAL80P26343 269 aa1.67□□□□□ -2.14
YGR109W-BYGR109W-B ADK2P26364 225 aa1.67□□□□□ -2.14
YGR109W-BYGR109W-B PTP2P29461 750 aa1.67□□□□□ -2.14
YGR109W-BYGR109W-B NFU1P32860 256 aa1.67□□□□□ -2.14
YGR109W-BYGR109W-B RTS1P38903 757 aa1.67□□□□□ -2.14
YGR109W-BYGR109W-B SAP185P40856 1058 aa1.67□□□□□ -2.14
YGR109W-BYGR109W-B DUG1P43616 481 aaKnown RBP1.67□□□□□ -2.14
YGR109W-BYGR109W-B GTR1Q00582 310 aa1.67□□□□□ -2.14
YGR109W-BYGR109W-B RPS15Q01855 142 aaKnown RBP1.67□□□□□ -2.14
YGR109W-BYGR109W-B YDR476CQ03362 224 aa1.67□□□□□ -2.14
YGR109W-BYGR109W-B MSS11Q03825 758 aa1.67□□□□□ -2.14
YGR109W-BYGR109W-B CRC1Q12289 327 aa1.67□□□□□ -2.14
YGR109W-BYGR109W-B EMP46Q12396 444 aa1.67□□□□□ -2.14
YGR109W-BYGR109W-B AI5_BETAQ9ZZX0 354 aa1.67□□□□□ -2.14
YGR109W-BYGR109W-B PCT1P13259 424 aa1.66□□□□□ -2.14
YGR109W-BYGR109W-B PET18P25362 215 aa1.66□□□□□ -2.14
YGR109W-BYGR109W-B MF(ALPHA)2P32435 120 aa1.66□□□□□ -2.14
YGR109W-BYGR109W-B PRP19P32523 503 aaKnown RBP1.66□□□□□ -2.14
YGR109W-BYGR109W-B SEF1P34228 1148 aa1.66□□□□□ -2.14
YGR109W-BYGR109W-B SRP68P38687 599 aaKnown RBP1.66□□□□□ -2.14
YGR109W-BYGR109W-B CAJ1P39101 391 aa1.66□□□□□ -2.14
YGR109W-BYGR109W-B AXL1P40851 1208 aa1.66□□□□□ -2.14
YGR109W-BYGR109W-B NNF2P53253 936 aa1.66□□□□□ -2.14
YGR109W-BYGR109W-B MAK10Q02197 733 aa1.66□□□□□ -2.14
YGR109W-BYGR109W-B TFC7Q12415 435 aa1.66□□□□□ -2.14
YGR109W-BYGR109W-B BCK1Q01389 1478 aa1.66□□□□□ -2.14
YGR109W-BYGR109W-B SSK22P25390 1331 aaPredicted RBP1.66□□□□□ -2.14
YGR109W-BYGR109W-B TUS1Q06412 1307 aa1.66□□□□□ -2.14
YGR109W-BYGR109W-B NUP188P52593 1655 aaKnown RBP1.66□□□□□ -2.14
YGR109W-BYGR109W-B ATP4P05626 244 aa1.66□□□□□ -2.14
YGR109W-BYGR109W-B ILS1P09436 1072 aaKnown RBP1.66□□□□□ -2.14
YGR109W-BYGR109W-B BET2P20133 325 aa1.66□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 73.4 ms