RNA–Protein interactions for RNA: YGL197W

MDS3, Transcript of Putative component of the TOR regulatory pathway, yeastyeast

Gene MDS3, Length 4,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDS3YGL197W YLR111WQ12528 110 aa1.56□□□□□ -2.16
MDS3YGL197W ARO2P28777 376 aaKnown RBP1.55□□□□□ -2.16
MDS3YGL197W SEC65P29478 273 aa1.55□□□□□ -2.16
MDS3YGL197W OAF1P39720 1047 aaPredicted RBP1.55□□□□□ -2.16
MDS3YGL197W FTR1P40088 404 aa1.55□□□□□ -2.16
MDS3YGL197W YMR178WQ03219 274 aaKnown RBP1.55□□□□□ -2.16
MDS3YGL197W SMA2Q04658 369 aa1.55□□□□□ -2.16
MDS3YGL197W MLH2Q07980 695 aa1.55□□□□□ -2.16
MDS3YGL197W CEX1Q12453 761 aa1.55□□□□□ -2.16
MDS3YGL197W PPG1P32838 368 aa1.55□□□□□ -2.16
MDS3YGL197W SAE2P46946 345 aa1.55□□□□□ -2.16
MDS3YGL197W MET13P53128 600 aa1.55□□□□□ -2.16
MDS3YGL197W YNL144CP53907 740 aa1.55□□□□□ -2.16
MDS3YGL197W HEF3P53978 1044 aaKnown RBP1.55□□□□□ -2.16
MDS3YGL197W ATG21Q02887 496 aa1.55□□□□□ -2.16
MDS3YGL197W MCP2Q06567 569 aa1.55□□□□□ -2.16
MDS3YGL197W SIR4P11978 1358 aa1.55□□□□□ -2.16
MDS3YGL197W TIM23P32897 222 aa1.55□□□□□ -2.16
MDS3YGL197W FSH1P38777 243 aaKnown RBP1.55□□□□□ -2.16
MDS3YGL197W FAR3P46671 204 aa1.55□□□□□ -2.16
MDS3YGL197W VPS64Q03944 604 aa1.55□□□□□ -2.16
MDS3YGL197W RSF1Q05043 376 aa1.55□□□□□ -2.16
MDS3YGL197W YLR352WQ06479 807 aa1.55□□□□□ -2.16
MDS3YGL197W POS5Q06892 414 aa1.55□□□□□ -2.16
MDS3YGL197W TMA7Q3E764 64 aaKnown RBP1.55□□□□□ -2.16
MDS3YGL197W PNO1Q99216 274 aaKnown RBP1.55□□□□□ -2.16
MDS3YGL197W ROM2P51862 1356 aaKnown RBP1.55□□□□□ -2.16
MDS3YGL197W ATP4P05626 244 aa1.54□□□□□ -2.16
MDS3YGL197W YER190C-BP0CX94 160 aa1.54□□□□□ -2.16
MDS3YGL197W YEL077W-AP0CX95 160 aa1.54□□□□□ -2.16
MDS3YGL197W YGR296C-BP0CX96 160 aa1.54□□□□□ -2.16
MDS3YGL197W YPL283W-BP0CX97 160 aa1.54□□□□□ -2.16
MDS3YGL197W YPR204C-AP0CX98 160 aa1.54□□□□□ -2.16
MDS3YGL197W LHS1P36016 881 aa1.54□□□□□ -2.16
MDS3YGL197W SHE10P53075 577 aa1.54□□□□□ -2.16
MDS3YGL197W CNM67P53865 581 aaKnown RBP1.54□□□□□ -2.16
MDS3YGL197W SPC19Q03954 165 aa1.54□□□□□ -2.16
MDS3YGL197W GTB1Q04924 702 aa1.54□□□□□ -2.16
MDS3YGL197W Q0142Q9ZZW4 58 aa1.54□□□□□ -2.16
MDS3YGL197W MHP1P43638 1398 aa1.54□□□□□ -2.16
MDS3YGL197W HSC82P15108 705 aaKnown RBP1.54□□□□□ -2.16
MDS3YGL197W PRO3P32263 286 aaKnown RBP1.54□□□□□ -2.16
MDS3YGL197W YHR033WP38690 423 aa1.54□□□□□ -2.16
MDS3YGL197W VID28P40547 921 aa1.54□□□□□ -2.16
MDS3YGL197W AIP1P46680 615 aaKnown RBP1.54□□□□□ -2.16
MDS3YGL197W VPS25P47142 202 aa1.54□□□□□ -2.16
MDS3YGL197W ASE1P50275 885 aa1.54□□□□□ -2.16
MDS3YGL197W YAT1P80235 687 aa1.54□□□□□ -2.16
MDS3YGL197W BET4Q00618 327 aa1.54□□□□□ -2.16
MDS3YGL197W HER1Q12276 1246 aa1.54□□□□□ -2.16
MDS3YGL197W MEF1P25039 761 aa1.54□□□□□ -2.16
MDS3YGL197W RPN2P32565 945 aaKnown RBP1.54□□□□□ -2.16
MDS3YGL197W NPR2P39923 615 aa1.54□□□□□ -2.16
MDS3YGL197W YIL152WP40455 235 aa1.54□□□□□ -2.16
MDS3YGL197W BTN2P53286 410 aa1.54□□□□□ -2.16
MDS3YGL197W CTL1Q03220 320 aaKnown RBP1.54□□□□□ -2.16
MDS3YGL197W YHM2Q04013 314 aa1.54□□□□□ -2.16
MDS3YGL197W VAM6Q07468 1049 aa1.54□□□□□ -2.16
MDS3YGL197W VAS1P07806 1104 aaKnown RBP1.54□□□□□ -2.16
MDS3YGL197W MUM2P38236 366 aa1.54□□□□□ -2.16
MDS3YGL197W PAF1P38351 445 aa1.54□□□□□ -2.16
MDS3YGL197W VBA2P38358 474 aaKnown RBP1.54□□□□□ -2.16
MDS3YGL197W PUS4P48567 403 aaKnown RBP1.54□□□□□ -2.16
MDS3YGL197W RNH70P53331 553 aa1.54□□□□□ -2.16
MDS3YGL197W CAC2Q04199 468 aa1.54□□□□□ -2.16
MDS3YGL197W MUM3Q08750 479 aa1.54□□□□□ -2.16
MDS3YGL197W YLR049CQ12110 428 aa1.54□□□□□ -2.16
MDS3YGL197W CNA1P23287 553 aa1.53□□□□□ -2.16
MDS3YGL197W ADH7P25377 361 aa1.53□□□□□ -2.16
MDS3YGL197W PET309P32522 965 aaPredicted RBP1.53□□□□□ -2.16
MDS3YGL197W PRP19P32523 503 aaKnown RBP1.53□□□□□ -2.16
MDS3YGL197W HCS1P34243 683 aa1.53□□□□□ -2.16
MDS3YGL197W RRP1P35178 278 aaPredicted RBP1.53□□□□□ -2.16
MDS3YGL197W YJL070CP40361 888 aa1.53□□□□□ -2.16
MDS3YGL197W YJL107CP42947 387 aa1.53□□□□□ -2.16
MDS3YGL197W YMR010WQ03687 405 aa1.53□□□□□ -2.16
MDS3YGL197W PLM2Q04383 521 aa1.53□□□□□ -2.16
MDS3YGL197W THI3Q07471 609 aa1.53□□□□□ -2.16
MDS3YGL197W LSP1Q12230 341 aaKnown RBP1.53□□□□□ -2.16
MDS3YGL197W LCB4Q12246 624 aa1.53□□□□□ -2.16
MDS3YGL197W REC107P21651 314 aa1.53□□□□□ -2.16
MDS3YGL197W YCR061WP25639 631 aa1.53□□□□□ -2.16
MDS3YGL197W KAP123P40069 1113 aaKnown RBP1.53□□□□□ -2.16
MDS3YGL197W UME1Q03010 460 aa1.53□□□□□ -2.16
MDS3YGL197W YMR317WQ04893 1140 aa1.53□□□□□ -2.16
MDS3YGL197W FMP42Q04991 504 aa1.53□□□□□ -2.16
MDS3YGL197W GSH2Q08220 491 aa1.53□□□□□ -2.16
MDS3YGL197W MED2Q12124 431 aa1.53□□□□□ -2.16
MDS3YGL197W NOP56Q12460 504 aaKnown RBP RIP-Chip data1.53□□□□□ -2.16 RIP-Chip
MDS3YGL197W ERR1P0CX10 437 aa1.53□□□□□ -2.16
MDS3YGL197W ERR2P0CX11 437 aa1.53□□□□□ -2.16
MDS3YGL197W GAC1P28006 793 aa1.53□□□□□ -2.16
MDS3YGL197W OCT1P35999 772 aa1.53□□□□□ -2.16
MDS3YGL197W CRG1P38892 291 aaRIP-Chip data1.53□□□□□ -2.16not detected
MDS3YGL197W UBP7P40453 1071 aa1.53□□□□□ -2.16
MDS3YGL197W ELP2P42935 788 aa1.53□□□□□ -2.16
MDS3YGL197W VPS4P52917 437 aa1.53□□□□□ -2.16
MDS3YGL197W OGG1P53397 376 aaPredicted RBP1.53□□□□□ -2.16
MDS3YGL197W SPT7P35177 1332 aa1.52□□□□□ -2.17
MDS3YGL197W HHF1P02309 103 aaKnown RBP1.52□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms