RNA–Protein interactions for RNA: YGL172W

NUP49, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP49, Length 1,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP49YGL172W KTR5P53966 522 aaPredicted RBP6.82□□□□□ -1.32
NUP49YGL172W NUP100Q02629 959 aa6.82□□□□□ -1.32
NUP49YGL172W TRS31Q03337 283 aa6.82□□□□□ -1.32
NUP49YGL172W BUD20Q08004 166 aaPredicted RBP6.82□□□□□ -1.32
NUP49YGL172W SLD7Q08457 257 aa6.82□□□□□ -1.32
NUP49YGL172W ISU2Q12056 156 aa6.82□□□□□ -1.32
NUP49YGL172W NOP58Q12499 511 aaKnown RBP6.82□□□□□ -1.32
NUP49YGL172W RAD3P06839 778 aa6.81□□□□□ -1.32
NUP49YGL172W HSP60P19882 572 aaKnown RBP6.81□□□□□ -1.32
NUP49YGL172W YSP3P25036 478 aa6.81□□□□□ -1.32
NUP49YGL172W MSH2P25847 964 aa6.81□□□□□ -1.32
NUP49YGL172W PYC2P32327 1180 aaKnown RBP6.81□□□□□ -1.32
NUP49YGL172W PPG1P32838 368 aa6.81□□□□□ -1.32
NUP49YGL172W CSE1P33307 960 aa6.81□□□□□ -1.32
NUP49YGL172W SER33P40510 469 aa6.81□□□□□ -1.32
NUP49YGL172W SPC105P53148 917 aa6.81□□□□□ -1.32
NUP49YGL172W EFM6P53970 246 aa6.81□□□□□ -1.32
NUP49YGL172W RPN9Q04062 393 aaKnown RBP6.81□□□□□ -1.32
NUP49YGL172W NHX1Q04121 633 aa6.81□□□□□ -1.32
NUP49YGL172W GSF2Q04697 403 aaKnown RBP6.81□□□□□ -1.32
NUP49YGL172W STE23Q06010 1027 aa6.81□□□□□ -1.32
NUP49YGL172W GPA2P10823 449 aa6.8□□□□□ -1.32
NUP49YGL172W NUD1P32336 851 aa6.8□□□□□ -1.32
NUP49YGL172W LTV1P34078 463 aa6.8□□□□□ -1.32
NUP49YGL172W RRP14P36080 434 aaKnown RBP6.8□□□□□ -1.32
NUP49YGL172W MRP21P38175 177 aa6.8□□□□□ -1.32
NUP49YGL172W HXT5P38695 592 aa6.8□□□□□ -1.32
NUP49YGL172W FMO1P38866 432 aa6.8□□□□□ -1.32
NUP49YGL172W PXA1P41909 870 aa6.8□□□□□ -1.32
NUP49YGL172W GLG2P47011 380 aa6.8□□□□□ -1.32
NUP49YGL172W RPA14P50106 137 aa6.8□□□□□ -1.32
NUP49YGL172W COG1P53079 417 aa6.8□□□□□ -1.32
NUP49YGL172W COG7P53195 279 aa6.8□□□□□ -1.32
NUP49YGL172W NOP15P53927 220 aaPredicted RBP6.8□□□□□ -1.32
NUP49YGL172W SMA1Q02651 245 aa6.8□□□□□ -1.32
NUP49YGL172W YMR178WQ03219 274 aaKnown RBP6.8□□□□□ -1.32
NUP49YGL172W USA1Q03714 838 aa6.8□□□□□ -1.32
NUP49YGL172W YKL068W-AQ3E826 78 aa6.8□□□□□ -1.32
NUP49YGL172W LSO1Q3E827 93 aa6.8□□□□□ -1.32
NUP49YGL172W YLR149CQ99296 730 aa6.8□□□□□ -1.32
NUP49YGL172W HOM2P13663 365 aaKnown RBP6.79□□□□□ -1.32
NUP49YGL172W HCM1P25364 564 aa6.79□□□□□ -1.32
NUP49YGL172W EMC1P25574 760 aa6.79□□□□□ -1.32
NUP49YGL172W ILV6P25605 309 aaKnown RBP6.79□□□□□ -1.32
NUP49YGL172W BEM1P29366 551 aa6.79□□□□□ -1.32
NUP49YGL172W GDA1P32621 518 aa6.79□□□□□ -1.32
NUP49YGL172W IMP3P32899 183 aaPredicted RBP6.79□□□□□ -1.32
NUP49YGL172W CTF13P35203 478 aa6.79□□□□□ -1.32
NUP49YGL172W MUD2P36084 527 aaKnown RBP6.79□□□□□ -1.32
NUP49YGL172W IRS4P36115 615 aaKnown RBP6.79□□□□□ -1.32
NUP49YGL172W ETR1P38071 380 aa6.79□□□□□ -1.32
NUP49YGL172W MEF2P39677 819 aa6.79□□□□□ -1.32
NUP49YGL172W SEO1P39709 593 aa6.79□□□□□ -1.32
NUP49YGL172W CWC24P53769 259 aa6.79□□□□□ -1.32
NUP49YGL172W TDA7P53882 636 aaPredicted RBP6.79□□□□□ -1.32
NUP49YGL172W YDR132CQ03900 495 aa6.79□□□□□ -1.32
NUP49YGL172W PPN1Q04119 674 aa6.79□□□□□ -1.32
NUP49YGL172W RPC11Q04307 110 aaPredicted RBP6.79□□□□□ -1.32
NUP49YGL172W MCP2Q06567 569 aa6.79□□□□□ -1.32
NUP49YGL172W YET3Q07451 203 aa6.79□□□□□ -1.32
NUP49YGL172W FAB1P34756 2278 aa6.78□□□□□ -1.32
NUP49YGL172W ILV2P07342 687 aaKnown RBP6.78□□□□□ -1.32
NUP49YGL172W MPH2P0CD99 609 aa6.78□□□□□ -1.32
NUP49YGL172W INO1P11986 533 aa6.78□□□□□ -1.32
NUP49YGL172W NSP1P14907 823 aaKnown RBP6.78□□□□□ -1.32
NUP49YGL172W HSP26P15992 214 aaKnown RBP RIP-Chip data6.78□□□□□ -1.32not detected
NUP49YGL172W ATP12P22135 325 aa6.78□□□□□ -1.32
NUP49YGL172W AMS1P22855 1083 aa6.78□□□□□ -1.32
NUP49YGL172W BRF1P29056 596 aa6.78□□□□□ -1.32
NUP49YGL172W BCK2P33306 851 aa6.78□□□□□ -1.32
NUP49YGL172W MAK5P38112 773 aaPredicted RBP6.78□□□□□ -1.32
NUP49YGL172W LRP1P38801 184 aaKnown RBP6.78□□□□□ -1.32
NUP49YGL172W NUP84P52891 726 aa6.78□□□□□ -1.32
NUP49YGL172W YGL140CP53120 1219 aa6.78□□□□□ -1.32
NUP49YGL172W YNL143CP53908 130 aa6.78□□□□□ -1.32
NUP49YGL172W AQR1P53943 586 aa6.78□□□□□ -1.32
NUP49YGL172W PET117Q02771 107 aa6.78□□□□□ -1.32
NUP49YGL172W BUD22Q04347 519 aaKnown RBP6.78□□□□□ -1.32
NUP49YGL172W CDC123Q05791 360 aa6.78□□□□□ -1.32
NUP49YGL172W YPR097WQ06839 1073 aa6.78□□□□□ -1.32
NUP49YGL172W SSC1P0CS90 654 aaKnown RBP6.77□□□□□ -1.33
NUP49YGL172W AMD1P15274 810 aaKnown RBP6.77□□□□□ -1.33
NUP49YGL172W YBR259WP38338 688 aa6.77□□□□□ -1.33
NUP49YGL172W YHI9P38765 294 aa6.77□□□□□ -1.33
NUP49YGL172W SPC97P38863 823 aa6.77□□□□□ -1.33
NUP49YGL172W PIK1P39104 1066 aa6.77□□□□□ -1.33
NUP49YGL172W PEX8P53248 589 aa6.77□□□□□ -1.33
NUP49YGL172W RTS3P53289 263 aa6.77□□□□□ -1.33
NUP49YGL172W CLU1Q03690 1277 aaKnown RBP6.77□□□□□ -1.33
NUP49YGL172W SFH1Q06168 426 aa6.77□□□□□ -1.33
NUP49YGL172W ADY3Q07732 790 aa6.77□□□□□ -1.33
NUP49YGL172W RUD3Q12234 484 aaKnown RBP6.77□□□□□ -1.33
NUP49YGL172W YOR338WQ99326 363 aa6.77□□□□□ -1.33
NUP49YGL172W PMT1P33775 817 aa6.76□□□□□ -1.33
NUP49YGL172W PHO11P35842 467 aa6.76□□□□□ -1.33
NUP49YGL172W OAF3P36023 863 aa6.76□□□□□ -1.33
NUP49YGL172W TCD2P36101 447 aaKnown RBP6.76□□□□□ -1.33
NUP49YGL172W LDB7P38210 180 aa6.76□□□□□ -1.33
NUP49YGL172W GIP1P38229 639 aa6.76□□□□□ -1.33
NUP49YGL172W PHO12P38693 467 aa6.76□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 53.3 ms