RNA–Protein interactions for RNA: YER100W

UBC6, Transcript of Ubiquitin-conjugating enzyme involved in ERAD, yeastyeast

Gene UBC6, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC6YER100W YAT1P80235 687 aa5.31□□□□□ -1.56
UBC6YER100W RQC1Q05468 723 aaKnown RBP5.31□□□□□ -1.56
UBC6YER100W PSR1Q07800 427 aa5.31□□□□□ -1.56
UBC6YER100W PPR1P07272 904 aaPredicted RBP5.3□□□□□ -1.56
UBC6YER100W NAT1P12945 854 aaKnown RBP5.3□□□□□ -1.56
UBC6YER100W STE4P18851 423 aa5.3□□□□□ -1.56
UBC6YER100W YSP3P25036 478 aa5.3□□□□□ -1.56
UBC6YER100W PUP2P32379 260 aa5.3□□□□□ -1.56
UBC6YER100W TOD6P34219 525 aa5.3□□□□□ -1.56
UBC6YER100W RXT2P38255 430 aa5.3□□□□□ -1.56
UBC6YER100W OTU2P38747 307 aaKnown RBP5.3□□□□□ -1.56
UBC6YER100W ERC1P38767 581 aa5.3□□□□□ -1.56
UBC6YER100W SEC31P38968 1273 aaKnown RBP5.3□□□□□ -1.56
UBC6YER100W FUN12P39730 1002 aaKnown RBP5.3□□□□□ -1.56
UBC6YER100W BUD27P43573 796 aaKnown RBP RIP-Chip data5.3□□□□□ -1.56not detected
UBC6YER100W LYS4P49367 693 aaPredicted RBP5.3□□□□□ -1.56
UBC6YER100W VID30P53076 958 aa5.3□□□□□ -1.56
UBC6YER100W BOP3P53958 396 aa5.3□□□□□ -1.56
UBC6YER100W ERB1Q04660 807 aaKnown RBP5.3□□□□□ -1.56
UBC6YER100W CRN1Q06440 651 aa5.3□□□□□ -1.56
UBC6YER100W IRC3Q06683 689 aa5.3□□□□□ -1.56
UBC6YER100W YDL073WQ07454 984 aa5.3□□□□□ -1.56
UBC6YER100W YDL242WQ07746 117 aa5.3□□□□□ -1.56
UBC6YER100W ALG7P07286 448 aa5.29□□□□□ -1.56
UBC6YER100W SRP54P20424 541 aaKnown RBP5.29□□□□□ -1.56
UBC6YER100W AMD2P22580 549 aa5.29□□□□□ -1.56
UBC6YER100W GPI10P30777 616 aa5.29□□□□□ -1.56
UBC6YER100W SYN8P31377 255 aa5.29□□□□□ -1.56
UBC6YER100W SIP1P32578 815 aa5.29□□□□□ -1.56
UBC6YER100W MDL1P33310 695 aa5.29□□□□□ -1.56
UBC6YER100W GCS1P35197 352 aa5.29□□□□□ -1.56
UBC6YER100W NTR2P36118 322 aaPredicted RBP5.29□□□□□ -1.56
UBC6YER100W OMA1P36163 345 aa5.29□□□□□ -1.56
UBC6YER100W KSP1P38691 1029 aaKnown RBP5.29□□□□□ -1.56
UBC6YER100W YIL166CP40445 542 aa5.29□□□□□ -1.56
UBC6YER100W SSU1P41930 458 aa5.29□□□□□ -1.56
UBC6YER100W SWP82P43554 623 aa5.29□□□□□ -1.56
UBC6YER100W CTK2P46962 323 aa5.29□□□□□ -1.56
UBC6YER100W NPA3P47122 385 aa5.29□□□□□ -1.56
UBC6YER100W PRP43P53131 767 aaKnown RBP5.29□□□□□ -1.56
UBC6YER100W OGG1P53397 376 aaPredicted RBP5.29□□□□□ -1.56
UBC6YER100W BUD22Q04347 519 aaKnown RBP5.29□□□□□ -1.56
UBC6YER100W MRD1Q06106 887 aaKnown RBP5.29□□□□□ -1.56
UBC6YER100W BUD7Q08754 746 aa5.29□□□□□ -1.56
UBC6YER100W YPL191CQ08930 360 aa5.29□□□□□ -1.56
UBC6YER100W ATG29Q12092 213 aa5.29□□□□□ -1.56
UBC6YER100W LCB4Q12246 624 aa5.29□□□□□ -1.56
UBC6YER100W AVL9Q12500 764 aa5.29□□□□□ -1.56
UBC6YER100W ARD1P07347 238 aaPredicted RBP5.28□□□□□ -1.56
UBC6YER100W YPK1P12688 680 aaKnown RBP5.28□□□□□ -1.56
UBC6YER100W CLC1P17891 233 aa5.28□□□□□ -1.56
UBC6YER100W REC107P21651 314 aa5.28□□□□□ -1.56
UBC6YER100W CLB1P24868 471 aa5.28□□□□□ -1.56
UBC6YER100W MRE11P32829 692 aa5.28□□□□□ -1.56
UBC6YER100W SEC66P33754 206 aa5.28□□□□□ -1.56
UBC6YER100W STB6P36085 766 aa5.28□□□□□ -1.56
UBC6YER100W DIA4P38705 446 aaPredicted RBP5.28□□□□□ -1.56
UBC6YER100W PIH1P38768 344 aa5.28□□□□□ -1.56
UBC6YER100W UIP3P39547 235 aa5.28□□□□□ -1.56
UBC6YER100W ARG2P40360 574 aa5.28□□□□□ -1.56
UBC6YER100W ATP22P50273 684 aaPredicted RBP5.28□□□□□ -1.56
UBC6YER100W FIN1Q03898 291 aa5.28□□□□□ -1.56
UBC6YER100W VPS38Q05919 439 aa5.28□□□□□ -1.56
UBC6YER100W PGC1Q08959 321 aa5.28□□□□□ -1.56
UBC6YER100W FMP40Q08968 688 aaPredicted RBP5.28□□□□□ -1.56
UBC6YER100W PDH1Q12428 516 aaKnown RBP5.28□□□□□ -1.56
UBC6YER100W COX1P00401 534 aa5.27□□□□□ -1.57
UBC6YER100W GAS1P22146 559 aaKnown RBP5.27□□□□□ -1.57
UBC6YER100W VMA16P23968 213 aa5.27□□□□□ -1.57
UBC6YER100W ADH7P25377 361 aa5.27□□□□□ -1.57
UBC6YER100W YCR051WP25631 222 aa5.27□□□□□ -1.57
UBC6YER100W SAS3P34218 831 aa5.27□□□□□ -1.57
UBC6YER100W CMC1P36064 111 aa5.27□□□□□ -1.57
UBC6YER100W GDI1P39958 451 aaKnown RBP5.27□□□□□ -1.57
UBC6YER100W UBX6P47049 396 aa5.27□□□□□ -1.57
UBC6YER100W NMA2P53204 395 aa5.27□□□□□ -1.57
UBC6YER100W TWF1P53250 332 aa5.27□□□□□ -1.57
UBC6YER100W BTN2P53286 410 aa5.27□□□□□ -1.57
UBC6YER100W IST1P53843 298 aaPredicted RBP5.27□□□□□ -1.57
UBC6YER100W SWA2Q06677 668 aa5.27□□□□□ -1.57
UBC6YER100W AI5_ALPHAQ9ZZX1 630 aa5.27□□□□□ -1.57
UBC6YER100W WHI2P12611 486 aa5.26□□□□□ -1.57
UBC6YER100W PCT1P13259 424 aa5.26□□□□□ -1.57
UBC6YER100W APE1P14904 514 aa5.26□□□□□ -1.57
UBC6YER100W MNE1P24720 663 aa5.26□□□□□ -1.57
UBC6YER100W URA7P28274 579 aaKnown RBP5.26□□□□□ -1.57
UBC6YER100W LAC1P28496 418 aa5.26□□□□□ -1.57
UBC6YER100W DEF1P35732 738 aaKnown RBP5.26□□□□□ -1.57
UBC6YER100W SEC28P40509 296 aaKnown RBP5.26□□□□□ -1.57
UBC6YER100W LCL3P53153 274 aa5.26□□□□□ -1.57
UBC6YER100W SMX3P54999 86 aaPredicted RBP5.26□□□□□ -1.57
UBC6YER100W YDR179W-AQ03983 463 aa5.26□□□□□ -1.57
UBC6YER100W AIM32Q04689 311 aa5.26□□□□□ -1.57
UBC6YER100W GFD1Q04839 188 aaKnown RBP5.26□□□□□ -1.57
UBC6YER100W LUC7Q07508 261 aaPredicted RBP5.26□□□□□ -1.57
UBC6YER100W AIM39Q08223 395 aa5.26□□□□□ -1.57
UBC6YER100W PAR32Q12515 295 aaKnown RBP5.26□□□□□ -1.57
UBC6YER100W Q0010Q9ZZX9 128 aa5.26□□□□□ -1.57
UBC6YER100W YRF1-4O13559 1382 aa5.26□□□□□ -1.57
UBC6YER100W MF(ALPHA)1P01149 165 aa5.25□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms